BLASTX nr result

ID: Mentha26_contig00038108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00038108
         (328 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17788.1| hypothetical protein MIMGU_mgv1a001774mg [Mimulus...    59   7e-07
ref|XP_006364384.1| PREDICTED: probable cyclic nucleotide-gated ...    58   2e-06
ref|XP_004235383.1| PREDICTED: probable cyclic nucleotide-gated ...    58   2e-06
ref|XP_002317721.1| cyclic nucleotide-gated ion channel 20 famil...    58   2e-06
ref|XP_006478111.1| PREDICTED: probable cyclic nucleotide-gated ...    55   8e-06
ref|XP_006478110.1| PREDICTED: probable cyclic nucleotide-gated ...    55   8e-06
ref|XP_006478108.1| PREDICTED: probable cyclic nucleotide-gated ...    55   8e-06
ref|XP_006441354.1| hypothetical protein CICLE_v10018948mg [Citr...    55   8e-06

>gb|EYU17788.1| hypothetical protein MIMGU_mgv1a001774mg [Mimulus guttatus]
          Length = 761

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/80 (42%), Positives = 43/80 (53%)
 Frame = -2

Query: 240 MDASEKDEIPMLPAAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFTG 61
           MD SE+DEIPMLP  ++                    SMSIP NS ++S+YE +LVGFTG
Sbjct: 1   MDPSERDEIPMLPTTYVQSDDIVESGNRAFATRTRSASMSIPRNSLETSDYEPSLVGFTG 60

Query: 60  PLRMNRRAPNTQMSGPLYAN 1
           PLR  +       +  LYAN
Sbjct: 61  PLRAQK------PTASLYAN 74


>ref|XP_006364384.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565397617|ref|XP_006364385.1| PREDICTED: probable
           cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565397619|ref|XP_006364386.1| PREDICTED: probable
           cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 771

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 41/78 (52%)
 Frame = -2

Query: 240 MDASEKDEIPMLPAAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFTG 61
           MD  EKDE+PML  ++                     S+S+P +S DS E + + VG+TG
Sbjct: 1   MDTFEKDEMPMLSPSYPQSDGNDAFQNRRSTYRTRSASLSMPMSSMDSFENDSSYVGYTG 60

Query: 60  PLRMNRRAPNTQMSGPLY 7
           PLR  RR    QMSGPLY
Sbjct: 61  PLRSERRTSLVQMSGPLY 78


>ref|XP_004235383.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Solanum lycopersicum]
          Length = 771

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 41/78 (52%)
 Frame = -2

Query: 240 MDASEKDEIPMLPAAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFTG 61
           MD  EKDE+PML  ++                     S+S+P +S DS E + + VG+TG
Sbjct: 1   MDTFEKDEMPMLSPSYPQSDGNDAFQNRRSTYRTRSASLSMPMSSIDSFENDSSYVGYTG 60

Query: 60  PLRMNRRAPNTQMSGPLY 7
           PLR  RR    QMSGPLY
Sbjct: 61  PLRSERRTSLVQMSGPLY 78


>ref|XP_002317721.1| cyclic nucleotide-gated ion channel 20 family protein [Populus
           trichocarpa] gi|222858394|gb|EEE95941.1| cyclic
           nucleotide-gated ion channel 20 family protein [Populus
           trichocarpa]
          Length = 769

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = -2

Query: 126 MSIPSNSADSSEYEHNLVGFTGPLRMNRRAPNTQMSGPLYAN 1
           +SIP NS +S  +E NLVG+TGPLR  R+AP  QMSGPLY N
Sbjct: 40  ISIPVNSMESYGFETNLVGYTGPLRSERKAPLVQMSGPLYIN 81


>ref|XP_006478111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 689

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 240 MDASEKDEIPMLP-AAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFT 64
           M   EKDE+PML  +                       SMSI  NS DS E E NLVG T
Sbjct: 1   MAGDEKDEMPMLSDSQSKSSDRNFDFRLQTFASRTRSASMSITMNSTDSFEPEANLVGLT 60

Query: 63  GPLRMNRRAPNTQMSGPLYAN 1
           GPLR  RR    QMSGPLY+N
Sbjct: 61  GPLRNERRTQFLQMSGPLYSN 81


>ref|XP_006478110.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 691

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 240 MDASEKDEIPMLP-AAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFT 64
           M   EKDE+PML  +                       SMSI  NS DS E E NLVG T
Sbjct: 1   MAGDEKDEMPMLSDSQSKSSDRNFDFRLQTFASRTRSASMSITMNSTDSFEPEANLVGLT 60

Query: 63  GPLRMNRRAPNTQMSGPLYAN 1
           GPLR  RR    QMSGPLY+N
Sbjct: 61  GPLRNERRTQFLQMSGPLYSN 81


>ref|XP_006478108.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568848639|ref|XP_006478109.1| PREDICTED: probable
           cyclic nucleotide-gated ion channel 20,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 774

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 240 MDASEKDEIPMLP-AAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFT 64
           M   EKDE+PML  +                       SMSI  NS DS E E NLVG T
Sbjct: 1   MAGDEKDEMPMLSDSQSKSSDRNFDFRLQTFASRTRSASMSITMNSTDSFEPEANLVGLT 60

Query: 63  GPLRMNRRAPNTQMSGPLYAN 1
           GPLR  RR    QMSGPLY+N
Sbjct: 61  GPLRNERRTQFLQMSGPLYSN 81


>ref|XP_006441354.1| hypothetical protein CICLE_v10018948mg [Citrus clementina]
           gi|567897734|ref|XP_006441355.1| hypothetical protein
           CICLE_v10018948mg [Citrus clementina]
           gi|557543616|gb|ESR54594.1| hypothetical protein
           CICLE_v10018948mg [Citrus clementina]
           gi|557543617|gb|ESR54595.1| hypothetical protein
           CICLE_v10018948mg [Citrus clementina]
          Length = 776

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 240 MDASEKDEIPMLP-AAFLHXXXXXXXXXXXXXXXXXXXSMSIPSNSADSSEYEHNLVGFT 64
           M   EKDE+PML  +                       SMSI  NS DS E E NLVG T
Sbjct: 1   MAGDEKDEMPMLSDSQSKSSDRNFDFRLQTFASRTRSASMSITMNSTDSFEPEANLVGLT 60

Query: 63  GPLRMNRRAPNTQMSGPLYAN 1
           GPLR  RR    QMSGPLY+N
Sbjct: 61  GPLRNERRTQFLQMSGPLYSN 81


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