BLASTX nr result
ID: Mentha26_contig00038064
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha26_contig00038064 (1006 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006295454.1| hypothetical protein CARUB_v10024557mg [Caps... 59 4e-06 ref|XP_006279310.1| hypothetical protein CARUB_v10012775mg, part... 58 5e-06 >ref|XP_006295454.1| hypothetical protein CARUB_v10024557mg [Capsella rubella] gi|482564162|gb|EOA28352.1| hypothetical protein CARUB_v10024557mg [Capsella rubella] Length = 863 Score = 58.5 bits (140), Expect = 4e-06 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 20/193 (10%) Frame = +1 Query: 94 GWLNNFHVDALLNLVAYEFDIH---HRSRDWTVLDMRATNTLISKDFKVMEIEP------ 246 GWL ++H+ A +++ ++ + +D TL++ DFK ++ P Sbjct: 623 GWLKDYHISATMSMFRRRSMLNPCPYPKERIAFIDQDFLRTLVN-DFKQFDMAPKNFLFN 681 Query: 247 -----YVNGKLPS---VGRIPWELTQRLFGCGNVGQNHWVLFQVCFKRQEVEVYDSLG-- 396 +VNG P+ ++ W L+GC +V NHWV + + ++ VYDS+ Sbjct: 682 NSCLEHVNGTAPTETATKKVWWIDVDHLYGCLSVNGNHWVALLIDLLQGKINVYDSIPSM 741 Query: 397 ISKDEIVAYFEDLCRNIPKALRVHRVWENQQRGNSPAILLRDVWDVV-VHEGSPKQDNLF 573 +S + L + IP L V + R NS R + +V V P +N Sbjct: 742 VSDSNMTLECLSLRQMIPALLNV--AIPEKHRKNS-----RQMLEVSRVKRNVPLNENPG 794 Query: 574 DCGILCLKVLECI 612 DCG+ LK +EC+ Sbjct: 795 DCGMYSLKYIECL 807 >ref|XP_006279310.1| hypothetical protein CARUB_v10012775mg, partial [Capsella rubella] gi|482547997|gb|EOA12208.1| hypothetical protein CARUB_v10012775mg, partial [Capsella rubella] Length = 375 Score = 58.2 bits (139), Expect = 5e-06 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 19/192 (9%) Frame = +1 Query: 94 GWLNNFHVDALLNLVAYEFDIH---HRSRDWTVLDMRATNTLISKDFKVMEIEP------ 246 GWL + H+ A +++ ++ + +D TL++ DFK ++ P Sbjct: 135 GWLKDHHISATMSMFRRRSMLNPCLYPKERIAFIDQDFLRTLVN-DFKQFDMAPKNFLFN 193 Query: 247 -----YVNGKLPS---VGRIPWELTQRLFGCGNVGQNHWVLFQVCFKRQEVEVYDSL--G 396 +VNG P+ ++ W L+GC V NHWV + + ++ VYDS+ Sbjct: 194 KSYLEHVNGTAPTETATKKVWWIDVDHLYGCLFVNGNHWVALHIDLPQGKINVYDSIPST 253 Query: 397 ISKDEIVAYFEDLCRNIPKALRVHRVWENQQRGNSPAILLRDVWDVVVHEGSPKQDNLFD 576 +S + L R IP L V +++++ + R V P +N D Sbjct: 254 VSDSNMALECLSLKRMIPALLNVAIPEKHRKKSRQMLEVRR------VKRNVPLNENHGD 307 Query: 577 CGILCLKVLECI 612 CG+ LK +EC+ Sbjct: 308 CGMYSLKYIECL 319