BLASTX nr result

ID: Mentha26_contig00038032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00038032
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29309.1| hypothetical protein MIMGU_mgv1a022839mg [Mimulus...    63   5e-08
ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    59   5e-07
ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [S...    57   3e-06

>gb|EYU29309.1| hypothetical protein MIMGU_mgv1a022839mg [Mimulus guttatus]
          Length = 621

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 56/154 (36%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
 Frame = -1

Query: 421 SNPSNADHPLKFHKYTKLGNLE-SSARQVSKSQT-EENSKEIASNR--TKAISNSSTIEK 254
           S PS  + P KF K      LE S++++  KS+  EE SKE+  N   TK +SNS ++EK
Sbjct: 165 SMPSFFNRPSKFRKAKPNDVLEISTSQEQGKSRNKEERSKEVVHNNRVTKVVSNSLSVEK 224

Query: 253 AGGPKKQMDSS-----RDTPHSRINLNESLRASPSRDERKSCDLGNDTRSQERSFRSIST 89
           A    KQ D S     RD P S    N +                 + RS   S R+ S+
Sbjct: 225 AEESNKQTDLSLRHGPRDAPASVFEENIAAL---------------EKRSSTNSARAFSS 269

Query: 88  RNLERDD-----SVSEIAVVGSIATVDMTPDDVV 2
           ++L  D+     SV E +V+ SI+ VD+TPDDVV
Sbjct: 270 KDLRGDERGGGGSVCEDSVLESISRVDVTPDDVV 303


>ref|XP_004245125.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum lycopersicum]
          Length = 644

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
 Frame = -1

Query: 346 RQVSKSQTEENSKEIASNRTKAISNSSTIEKAGGPKKQMDSSRDTPHSRINLNESLRAS- 170
           RQ   SQ +EN K   + R K  SNS++ E    P+    S  +      + +   R   
Sbjct: 166 RQQRNSQNKENLKCTLARREKTTSNSASKECRLDPQVGCSSIPEPVKGTYDGSSYPRKEF 225

Query: 169 PSRDERKSCDLGNDTRSQE-RSFRSISTRNLERDDSVSEIAVVGSIATVDMTPDDVV 2
            S ++  + DL NDT SQE R+ +S+ T NL+R D +SE + V SI+  D++PDD+V
Sbjct: 226 VSEEQLTANDLVNDTESQEDRAHKSLQTGNLDRGDDLSETSRVESISGTDISPDDIV 282


>ref|XP_006355312.1| PREDICTED: protein EARLY FLOWERING 3-like [Solanum tuberosum]
          Length = 656

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
 Frame = -1

Query: 367 GNLESSARQVSKSQTEENSKEIASNRTKAISNSSTIEKAGGPKKQMDSSRDTPHSRINLN 188
           G  + + RQ   SQ +EN K   + R K  SNS++ E    P  Q+  +      ++  +
Sbjct: 159 GVTDLTLRQQRNSQNKENPKCTVARREKTTSNSASKECRLDP--QVGCTIIPEPVKVTYD 216

Query: 187 ESL---RASPSRDERKSCDLGNDTRSQE-RSFRSISTRNLERDDSVSEIAVVGSIATVDM 20
           +S    +A  S ++  + DL NDT SQE ++ +S+ T NL+R D +SE + V SI+  D+
Sbjct: 217 DSSYPRKAFISEEQLTANDLVNDTESQEDKAHKSLQTGNLDRGDDLSETSRVESISGTDI 276

Query: 19  TPDDVV 2
           +PD +V
Sbjct: 277 SPDVIV 282


Top