BLASTX nr result

ID: Mentha26_contig00037527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00037527
         (364 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU35683.1| hypothetical protein MIMGU_mgv1a000139mg [Mimulus...    60   3e-07
ref|XP_006339249.1| PREDICTED: transcription elongation factor S...    60   4e-07
ref|XP_006339248.1| PREDICTED: transcription elongation factor S...    60   4e-07
ref|XP_004249330.1| PREDICTED: transcription elongation factor S...    60   4e-07

>gb|EYU35683.1| hypothetical protein MIMGU_mgv1a000139mg [Mimulus guttatus]
          Length = 1644

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +3

Query: 3    DRLVAYFQRHIDESADSGQSLRSMAAMVPMRSPAP 107
            DRLVAYFQRHID+  DS  S+RS+AAMVPMRSPAP
Sbjct: 1418 DRLVAYFQRHIDDPFDSAPSIRSVAAMVPMRSPAP 1452


>ref|XP_006339249.1| PREDICTED: transcription elongation factor SPT6-like isoform X2
            [Solanum tuberosum]
          Length = 1642

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    DRLVAYFQRHIDESADSGQSLRSMAAMVPMRSPA 104
            DRLVAYFQRHID+  DSG S+RS+AAMVPMRSPA
Sbjct: 1440 DRLVAYFQRHIDDPHDSGPSIRSVAAMVPMRSPA 1473


>ref|XP_006339248.1| PREDICTED: transcription elongation factor SPT6-like isoform X1
            [Solanum tuberosum]
          Length = 1643

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    DRLVAYFQRHIDESADSGQSLRSMAAMVPMRSPA 104
            DRLVAYFQRHID+  DSG S+RS+AAMVPMRSPA
Sbjct: 1441 DRLVAYFQRHIDDPHDSGPSIRSVAAMVPMRSPA 1474


>ref|XP_004249330.1| PREDICTED: transcription elongation factor SPT6-like [Solanum
            lycopersicum]
          Length = 1642

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +3

Query: 3    DRLVAYFQRHIDESADSGQSLRSMAAMVPMRSPA 104
            DRLVAYFQRHID+  DSG S+RS+AAMVPMRSPA
Sbjct: 1437 DRLVAYFQRHIDDPHDSGPSIRSVAAMVPMRSPA 1470


Top