BLASTX nr result

ID: Mentha26_contig00036822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00036822
         (699 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tubero...    56   3e-09
gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]    56   3e-09
ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding prote...    55   6e-09
ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucl...    55   6e-09
ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucl...    54   3e-07
ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding prote...    53   3e-07

>ref|NP_001275247.1| uncharacterized LOC102594986 [Solanum tuberosum]
           gi|413968566|gb|AFW90620.1| RNA binding protein-like
           protein [Solanum tuberosum]
          Length = 217

 Score = 55.8 bits (133), Expect(2) = 3e-09
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPA+ + +TE KENKA VLYI  IPHGFYE
Sbjct: 35  LPLEGGPAQKLPKTELKENKATVLYIGRIPHGFYE 69



 Score = 32.3 bits (72), Expect(2) = 3e-09
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQF---SASKEEATATCP 597
           +G+KARKKA  K + K A+ F   SASK+EA    P
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLP 36


>gb|ABB87134.1| RNA binding protein-like protein [Solanum tuberosum]
          Length = 217

 Score = 55.8 bits (133), Expect(2) = 3e-09
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPA+ + +TE KENKA VLYI  IPHGFYE
Sbjct: 35  LPLEGGPAQKLPKTELKENKATVLYIGRIPHGFYE 69



 Score = 32.3 bits (72), Expect(2) = 3e-09
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQF---SASKEEATATCP 597
           +G+KARKKA  K + K A+ F   SASK+EA    P
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLP 36


>ref|XP_006347213.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           isoform X1 [Solanum tuberosum]
           gi|565360925|ref|XP_006347214.1| PREDICTED:
           uncharacterized RNA-binding protein C1827.05c-like
           isoform X2 [Solanum tuberosum]
          Length = 217

 Score = 54.7 bits (130), Expect(2) = 6e-09
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPA+ + +TE +ENKA VLYI  IPHGFYE
Sbjct: 35  LPLEGGPAQKLPKTEVRENKATVLYIGRIPHGFYE 69



 Score = 32.3 bits (72), Expect(2) = 6e-09
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQF---SASKEEATATCP 597
           +G+KARKKA  K + K A+ F   SASK+EA    P
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLP 36


>ref|XP_004241297.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 217

 Score = 54.7 bits (130), Expect(2) = 6e-09
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPA+ + +TE +ENKA VLYI  IPHGFYE
Sbjct: 35  LPLEGGPAQKLPKTEVRENKATVLYIGRIPHGFYE 69



 Score = 32.3 bits (72), Expect(2) = 6e-09
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQF---SASKEEATATCP 597
           +G+KARKKA  K + K A+ F   SASK+EA    P
Sbjct: 1   MGVKARKKAITKKLKKGASDFSASSASKDEAREFLP 36


>ref|XP_004250997.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
           phosphoprotein-like [Solanum lycopersicum]
          Length = 216

 Score = 54.3 bits (129), Expect(2) = 3e-07
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPAR + +TE +E+KA +LYI  IPHGFYE
Sbjct: 35  LPLEGGPARKLPDTEVRESKATILYIGRIPHGFYE 69



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQFSAS 570
           +G K RKK+  K + K A +FSAS
Sbjct: 1   MGAKGRKKSITKKLKKGANEFSAS 24


>ref|XP_006349058.1| PREDICTED: uncharacterized RNA-binding protein C1827.05c-like
           [Solanum tuberosum]
          Length = 216

 Score = 53.1 bits (126), Expect(2) = 3e-07
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +3

Query: 591 LPLEGGPARGILETENKENKAIVLYIDSIPHGFYE 695
           LPLEGGPAR + +TE +E+K+ +LYI  IPHGFYE
Sbjct: 35  LPLEGGPARKLPDTEVRESKSTILYIGRIPHGFYE 69



 Score = 28.1 bits (61), Expect(2) = 3e-07
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 499 VGLKARKKACAKNVMKAAAQFSAS 570
           +G K RKK+  K + K A++FSAS
Sbjct: 1   MGAKGRKKSITKKLKKGASEFSAS 24


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