BLASTX nr result

ID: Mentha26_contig00036680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00036680
         (471 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22373.1| hypothetical protein MIMGU_mgv1a001842mg [Mimulus...    60   4e-07
gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus...    58   2e-06
ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|NP_564247.1| pentatricopeptide repeat-containing protein [Ar...    56   6e-06
gb|AAM61409.1| unknown [Arabidopsis thaliana]                          56   6e-06
ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Caps...    55   8e-06

>gb|EYU22373.1| hypothetical protein MIMGU_mgv1a001842mg [Mimulus guttatus]
          Length = 751

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/45 (55%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQY 135
           L+KIRRRC REMD+++D KV   ARQLK+ + +E R+++LF++QY
Sbjct: 702 LKKIRRRCVREMDYDSDAKVESFARQLKIRLGTESRRDVLFNLQY 746


>gb|EYU28858.1| hypothetical protein MIMGU_mgv1a020475mg [Mimulus guttatus]
          Length = 606

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQY 135
           L+K+RRRC REMD+E+D KV  LARQ K+ M +E R+++LF++ Y
Sbjct: 557 LKKVRRRCVREMDYESDEKVESLARQFKIRMGTEVRRDLLFNLHY 601


>ref|XP_006484190.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 613

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYS 138
           L+K+RRRC REMD E++ +V  LA++  + M +E RKNILF+++YS
Sbjct: 564 LKKVRRRCVREMDEESNDRVEALAKKFDIRMNTENRKNILFNLEYS 609


>ref|XP_006348701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum tuberosum]
          Length = 617

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/48 (47%), Positives = 38/48 (79%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYSGE 144
           L+KIRRRC REMD+E+D +V +L ++  + M +E R+N+LF+++Y+ E
Sbjct: 567 LKKIRRRCTREMDYESDDRVEELTKKFNIRMGTENRRNMLFNLRYNME 614


>ref|XP_004239056.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Solanum lycopersicum]
          Length = 617

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/48 (47%), Positives = 38/48 (79%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYSGE 144
           L+KIRRRC REMD+E+D +V +L ++  + M +E R+N+LF+++Y+ E
Sbjct: 567 LKKIRRRCTREMDYESDDRVEELTKKFNIRMGAENRRNMLFNLRYNME 614


>ref|NP_564247.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75173405|sp|Q9FZD1.1|PPR58_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g26460, mitochondrial; Flags: Precursor
           gi|9797754|gb|AAF98572.1|AC013427_15 Contains similarity
           to a hypothetical protein F21B7.16 gi|7485908 from
           Arabidopsis thaliana BAC F21B7 gb|AC002560 and contains
           multiple PPR PF|01535 repeats and a domain of unknown
           function PF|00668. ESTs gb|T45755, gb|AI993167,
           gb|AV554476, gb|T46823, gb|T41981, gb|AV546597,
           gb|AI099868 come from this gene [Arabidopsis thaliana]
           gi|19698979|gb|AAL91225.1| unknown protein [Arabidopsis
           thaliana] gi|22136300|gb|AAM91228.1| unknown protein
           [Arabidopsis thaliana] gi|332192573|gb|AEE30694.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYS-GENTNN 156
           L+K+RRRC REMD E D +V  LA++ ++ M SE R+N+LF+I YS G   NN
Sbjct: 578 LKKLRRRCVREMDDENDDQVEALAKKFQIRMGSENRRNMLFNIDYSRGRALNN 630


>gb|AAM61409.1| unknown [Arabidopsis thaliana]
          Length = 630

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYS-GENTNN 156
           L+K+RRRC REMD E D +V  LA++ ++ M SE R+N+LF+I YS G   NN
Sbjct: 578 LKKLRRRCVREMDDENDDQVEALAKKFQIRMGSENRRNMLFNIDYSRGRALNN 630


>ref|XP_006303169.1| hypothetical protein CARUB_v10008572mg [Capsella rubella]
           gi|482571880|gb|EOA36067.1| hypothetical protein
           CARUB_v10008572mg [Capsella rubella]
          Length = 630

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/53 (50%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   LRKIRRRCAREMDHEADGKVVDLARQLKVIMRSEKRKNILFDIQYS-GENTNN 156
           L+K+RRRC REMD+E D +V  LA++ ++ M +E R+N+LF+I YS G   NN
Sbjct: 578 LKKLRRRCVREMDNENDDQVEALAKKFQIRMGTENRRNMLFNIDYSRGRALNN 630


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