BLASTX nr result

ID: Mentha26_contig00036610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00036610
         (439 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20418.1| hypothetical protein MIMGU_mgv1a000468mg [Mimulus...    95   1e-17
ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 ...    59   9e-07

>gb|EYU20418.1| hypothetical protein MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300601|gb|EYU20419.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300602|gb|EYU20420.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
           gi|604300603|gb|EYU20421.1| hypothetical protein
           MIMGU_mgv1a000468mg [Mimulus guttatus]
          Length = 1130

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 50/109 (45%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
 Frame = +1

Query: 118 SLDGKGVRYNQSPLRSTDDSSDDETFHSSEQHQAAQSNLKEEIDLHGGRMRRKVVFDHKM 297
           S DG+     +   +S D+SS++ETF++SEQH  AQSN KE+ID+H GR+RR+ VF+++M
Sbjct: 395 SSDGEKKTIKKPSSKSIDESSEEETFYASEQHSPAQSNFKEQIDVHDGRVRRRAVFENEM 454

Query: 298 XXXXXXXXXXXXXXXXXNDEIEKGEEDML-SHSDSSA-DEKDNEDEMGN 438
                            +D  E G+++   SHSDSSA DE+DNEDEMGN
Sbjct: 455 VTDDKDSGDEDDSDSSDDDNTENGDDEYASSHSDSSADDEEDNEDEMGN 503


>ref|XP_004230113.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Solanum
           lycopersicum]
          Length = 1212

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +1

Query: 163 STDDSSDDETFHSSEQHQAAQSNLKEEIDLHGGRMRRKVVFDHKMXXXXXXXXXXXXXXX 342
           S+DDSS++E     E+H    S+ +E +D H GRMRRK +FD+                 
Sbjct: 468 SSDDSSEEEDNIGPEKHPGLSSSFREHVDFHDGRMRRKAIFDNDNDFDEKDYSEEDVEED 527

Query: 343 XXNDEIEKGEEDMLSHSDSSADE--KDNEDEMGN 438
             +D++E  +E+  ++ +S  D+    NE++MGN
Sbjct: 528 AQDDDLEDTDEENEAYHNSGDDDDFDTNEEDMGN 561


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