BLASTX nr result

ID: Mentha26_contig00034667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00034667
         (1705 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    72   8e-10
ref|XP_007011146.1| F-box and associated interaction domains-con...    59   5e-06
ref|XP_007011145.1| F-box and associated interaction domains-con...    59   5e-06

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein, putative
            isoform 1 [Theobroma cacao]
            gi|590586605|ref|XP_007015751.1| F-box and associated
            interaction domains-containing protein, putative isoform
            1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box and
            associated interaction domains-containing protein,
            putative isoform 1 [Theobroma cacao]
            gi|508786114|gb|EOY33370.1| F-box and associated
            interaction domains-containing protein, putative isoform
            1 [Theobroma cacao]
          Length = 387

 Score = 72.0 bits (175), Expect = 8e-10
 Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 4/294 (1%)
 Frame = +3

Query: 489  DDRHYFAAHSVGEDGAIKPKYYMYAPYPLRGGSCDFSGANCNGVFHFHYLDARDHFLWNP 668
            +D HYF+A S  +         ++ P+             CNG+   H  DA    LWNP
Sbjct: 72   NDIHYFSALSTEKGENFSVTENIHLPFFENCWYAPVVSGPCNGLLCLH--DAGKAALWNP 129

Query: 669  ASNWVKTLPLSPEKMKGISRSEVLDC-AMWCDDDQDNCKVLLVVADNVDDKDFDPVFNES 845
            ++   K LP S         S    C     D   D+ KV+  V +  D+ +      E 
Sbjct: 130  STREFKILPRSSVNRPPSVDSTSFGCLGFGFDSITDDYKVVRFVTNYFDENE------EE 183

Query: 846  GELVGEYGDRSTFHLELYSSKTNXXXXXXXXXXXXXXPNFLPGTCLDGVYHCGAHSSKGE 1025
            G L           +ELYS K++                      ++G Y+  A +   +
Sbjct: 184  GGLADWI-----HQVELYSLKSDSWKEISVPEAHPYASPLF-NNYVNGSYYWQA-TGNSD 236

Query: 1026 MCILLFDFANETTSTMPLTV--GCSAMDELRLVEYKGLPSVLISKLMEPIPSTYYHYVWD 1199
              IL FD ANE  ST+PL    G  A   L+L+++ G    ++    E    +   +V  
Sbjct: 237  YLILSFDMANEKFSTLPLPTFGGSLAQYYLQLLDFNGSLGAIVYP-REGTEKSIDLWVM- 294

Query: 1200 NGKWSYNYRL-CTCGVQRPICFSRDGQVLYFESLNDELVMLNLTTGETKCLGVY 1358
            NG W+  + +    GV+RP+ F ++G+ L+ ES N ELV+ +  T E K LG++
Sbjct: 295  NGSWTRQFSIESVSGVERPLGFWKNGE-LFLESSNHELVLFDPATRELKNLGIH 347


>ref|XP_007011146.1| F-box and associated interaction domains-containing protein isoform 2
            [Theobroma cacao] gi|508728059|gb|EOY19956.1| F-box and
            associated interaction domains-containing protein isoform
            2 [Theobroma cacao]
          Length = 400

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
 Frame = +3

Query: 609  CNGVFHFHYLDARDHFLWNPASNWVKTLPLSPEKMKGISRSEVLDCAMW------CDDDQ 770
            CNG+   H  D     LWNP++  VK LP S      ISR    D   +       D + 
Sbjct: 109  CNGLLCVH--DNYSIILWNPSTREVKVLPEST-----ISRPPATDDTYFGFVGFGFDRNS 161

Query: 771  DNCKVLLVVADNVDDKDFDPVFNESGELVGEYGDRSTFHLELYSSKTNXXXXXXXXXXXX 950
            ++ KVL  V + V ++D        G  V E+     + ++LYS +T+            
Sbjct: 162  NDYKVLRCVNNCVLEED--------GFAVLEF----IYQIDLYSLRTDSWREIAHPDVFV 209

Query: 951  XXPNFLPGTCLDGVYHCGAHSSKGEMCILLFDFANETTSTMPL-TVGCSAMD-ELRLVEY 1124
              P +L    ++G+Y+  A    G++ IL FD   E  ST+ L   G S  +    +  +
Sbjct: 210  YNP-YLFNAYINGIYYWEATGDDGDL-ILSFDMVEEVFSTLSLPNFGMSKAECSWCIASF 267

Query: 1125 KGLPSVLISKLMEPIPSTYYHYVWDNGKWSYNYRLCT---CGVQRPICFSRDGQVLYFES 1295
            K     L + +   I     + +W    +S+  +L      GV+ P+ F ++G+ L+ ES
Sbjct: 268  K---EALATIVHPRIGMEKCYDIWILNGYSWTKQLTIGPILGVEMPLGFWKNGE-LFLES 323

Query: 1296 LNDELVMLNLTTGETKCLGVYCS 1364
             N +LVM +  TG+ +  G+Y S
Sbjct: 324  ENHKLVMFDPCTGQLRDFGIYMS 346


>ref|XP_007011145.1| F-box and associated interaction domains-containing protein isoform 1
            [Theobroma cacao] gi|508728058|gb|EOY19955.1| F-box and
            associated interaction domains-containing protein isoform
            1 [Theobroma cacao]
          Length = 467

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
 Frame = +3

Query: 609  CNGVFHFHYLDARDHFLWNPASNWVKTLPLSPEKMKGISRSEVLDCAMW------CDDDQ 770
            CNG+   H  D     LWNP++  VK LP S      ISR    D   +       D + 
Sbjct: 109  CNGLLCVH--DNYSIILWNPSTREVKVLPEST-----ISRPPATDDTYFGFVGFGFDRNS 161

Query: 771  DNCKVLLVVADNVDDKDFDPVFNESGELVGEYGDRSTFHLELYSSKTNXXXXXXXXXXXX 950
            ++ KVL  V + V ++D        G  V E+     + ++LYS +T+            
Sbjct: 162  NDYKVLRCVNNCVLEED--------GFAVLEF----IYQIDLYSLRTDSWREIAHPDVFV 209

Query: 951  XXPNFLPGTCLDGVYHCGAHSSKGEMCILLFDFANETTSTMPL-TVGCSAMD-ELRLVEY 1124
              P +L    ++G+Y+  A    G++ IL FD   E  ST+ L   G S  +    +  +
Sbjct: 210  YNP-YLFNAYINGIYYWEATGDDGDL-ILSFDMVEEVFSTLSLPNFGMSKAECSWCIASF 267

Query: 1125 KGLPSVLISKLMEPIPSTYYHYVWDNGKWSYNYRLCT---CGVQRPICFSRDGQVLYFES 1295
            K     L + +   I     + +W    +S+  +L      GV+ P+ F ++G+ L+ ES
Sbjct: 268  K---EALATIVHPRIGMEKCYDIWILNGYSWTKQLTIGPILGVEMPLGFWKNGE-LFLES 323

Query: 1296 LNDELVMLNLTTGETKCLGVYCS 1364
             N +LVM +  TG+ +  G+Y S
Sbjct: 324  ENHKLVMFDPCTGQLRDFGIYMS 346


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