BLASTX nr result

ID: Mentha26_contig00033987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00033987
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533124.1| polypyrimidine tract binding protein, putati...    57   3e-06

>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 24/85 (28%)
 Frame = +3

Query: 6   SWYPS----GEAYASVPPSTFPGQAYNSAPSPAYATSANPASGPPNTRNGP--------- 146
           +W PS    G AY SVPP TFPGQ+Y  AP P Y ++A P    P T+  P         
Sbjct: 399 AWNPSMEAGGPAYPSVPPGTFPGQSY-PAPPPTYVSAAMPVGSSPLTQGSPMSPGVGTMP 457

Query: 147 -----------PGATSHPSQSPYYG 188
                      PG  S P Q P+YG
Sbjct: 458 MTHPGVQSNLRPGGASPPGQPPFYG 482


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