BLASTX nr result

ID: Mentha26_contig00033912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00033912
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29755.1| hypothetical protein MIMGU_mgv1a008780mg [Mimulus...    86   4e-15
gb|EYU22327.1| hypothetical protein MIMGU_mgv1a0095012mg, partia...    86   4e-15
ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like...    75   1e-11
ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like...    75   1e-11
ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4-like...    75   1e-11
ref|XP_002516394.1| spliceosome associated protein, putative [Ri...    69   9e-10
ref|XP_002310211.2| hypothetical protein POPTR_0007s12570g [Popu...    68   2e-09
ref|XP_006383228.1| hypothetical protein POPTR_0005s12680g, part...    67   3e-09
ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like...    67   3e-09
ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4-like...    67   3e-09
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...    67   3e-09
ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like...    66   4e-09
ref|XP_007133856.1| hypothetical protein PHAVU_011G214800g [Phas...    65   1e-08
ref|XP_006856079.1| hypothetical protein AMTR_s00059p00117370 [A...    64   3e-08
ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...    64   3e-08
emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]    64   3e-08
gb|EPS66244.1| hypothetical protein M569_08532, partial [Genlise...    63   4e-08
ref|XP_007046987.1| RNA-binding family protein isoform 2 [Theobr...    63   5e-08
ref|XP_007046986.1| RNA-binding family protein isoform 1 [Theobr...    63   5e-08
ref|XP_006425712.1| hypothetical protein CICLE_v10025862mg [Citr...    62   8e-08

>gb|EYU29755.1| hypothetical protein MIMGU_mgv1a008780mg [Mimulus guttatus]
          Length = 362

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/70 (61%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI-PQQNGSVSAAIPPPRPFSNGXXXXXXXXXXXXXX 178
           VLA+SNPTTQRSRPHTMFASGPPT+ PQQNG+VSA + PPRPF+NG              
Sbjct: 206 VLAASNPTTQRSRPHTMFASGPPTLPPQQNGAVSAPVAPPRPFANGSVPPPPMPALRPPP 265

Query: 179 XXXNIYQSMQ 208
              N+YQ MQ
Sbjct: 266 PPQNMYQPMQ 275


>gb|EYU22327.1| hypothetical protein MIMGU_mgv1a0095012mg, partial [Mimulus
           guttatus]
          Length = 219

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/70 (61%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI-PQQNGSVSAAIPPPRPFSNGXXXXXXXXXXXXXX 178
           VLA+SNPTTQRSRPHTMFASGPPT+ PQQNG+VSA + PPRPF+NG              
Sbjct: 63  VLAASNPTTQRSRPHTMFASGPPTLPPQQNGAVSAPVAPPRPFANGSVPPPPMPALRPPP 122

Query: 179 XXXNIYQSMQ 208
              N+YQ MQ
Sbjct: 123 PPQNMYQPMQ 132


>ref|XP_006341534.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
          Length = 364

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNGXXXXXXXXXXXX 172
           VLASSNP TQ++RPHTMFASGPPT   +PQ NG+V A + PPRPF+NG            
Sbjct: 206 VLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPV-PPRPFANGPMPPAPVPAIRP 264

Query: 173 XXXXXNIYQSMQM 211
                NIY  MQM
Sbjct: 265 PPMQPNIYPPMQM 277


>ref|XP_006341070.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum tuberosum]
          Length = 363

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNGXXXXXXXXXXXX 172
           VLASSNP TQ++RPHTMFASGPPT   +PQ NG+V A I PPRPF+NG            
Sbjct: 206 VLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPI-PPRPFANGPMPPAPVPTIRP 264

Query: 173 XXXXXNIYQSMQM 211
                N+Y  MQM
Sbjct: 265 PPMQPNVYPPMQM 277


>ref|XP_004235773.1| PREDICTED: splicing factor 3B subunit 4-like [Solanum lycopersicum]
          Length = 364

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNGXXXXXXXXXXXX 172
           VLASSNP TQ++RPHTMFASGPPT   +PQ NG+V A + PPRPF+NG            
Sbjct: 206 VLASSNPGTQKNRPHTMFASGPPTLPGVPQANGAVGAPV-PPRPFANGPMPPAPVPAIRP 264

Query: 173 XXXXXNIYQSMQM 211
                NIY  MQM
Sbjct: 265 PPMQPNIYPPMQM 277


>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
           gi|223544492|gb|EEF46011.1| spliceosome associated
           protein, putative [Ricinus communis]
          Length = 376

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNP++Q+SRPHT+FASGPPT   IPQ NG+V A + PPRPF+NG
Sbjct: 206 VLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTVGAPV-PPRPFANG 252


>ref|XP_002310211.2| hypothetical protein POPTR_0007s12570g [Populus trichocarpa]
           gi|550334734|gb|EEE90661.2| hypothetical protein
           POPTR_0007s12570g [Populus trichocarpa]
          Length = 377

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTIPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNPTTQ+SRPHT+FASGPPT+  Q      A  PPRPF+NG
Sbjct: 206 VLAASNPTTQKSRPHTLFASGPPTLASQANGAMVAPVPPRPFANG 250


>ref|XP_006383228.1| hypothetical protein POPTR_0005s12680g, partial [Populus
           trichocarpa] gi|550338810|gb|ERP61025.1| hypothetical
           protein POPTR_0005s12680g, partial [Populus trichocarpa]
          Length = 295

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTIP-QQNGSVSAAIPPPRPFSNG 136
           VLA SNPT Q+SRPHT+FASGPPT+P   NG+V A + PPRPF+NG
Sbjct: 132 VLAESNPTNQKSRPHTLFASGPPTLPTHANGAVMAPV-PPRPFANG 176


>ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 365

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTIPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNPTTQ+SRPHT+FASGPPT+P    +   A  PPRPF+NG
Sbjct: 206 VLAASNPTTQKSRPHTLFASGPPTLPSVPQANGVAPVPPRPFANG 250


>ref|XP_004503120.1| PREDICTED: splicing factor 3B subunit 4-like [Cicer arietinum]
          Length = 379

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
 Frame = +2

Query: 5   LASSNPTTQRSRPHTMFASGPPTIP---QQNGSVSAAIPPPRPFSNG 136
           LA SNPT Q+SRPHT+FASGPPT+P   Q NG+V A + PPRPF+NG
Sbjct: 207 LAESNPTAQKSRPHTLFASGPPTLPNVAQANGTVPAPV-PPRPFANG 252


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
           gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
           [Medicago truncatula]
          Length = 379

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/48 (64%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI---PQQNGSVSAAIPPPRPFSNG 136
           VLA+SNPT Q+SRPHT+FASGPP++   PQ NG++ A + PPRPF+NG
Sbjct: 206 VLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTIPAPV-PPRPFANG 252


>ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
          Length = 364

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTIPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNPTTQ+SRPHT+FASGPPT+P    +   A  PPRPF NG
Sbjct: 206 VLAASNPTTQKSRPHTLFASGPPTLPSAPQANGVAPVPPRPFVNG 250


>ref|XP_007133856.1| hypothetical protein PHAVU_011G214800g [Phaseolus vulgaris]
           gi|561006856|gb|ESW05850.1| hypothetical protein
           PHAVU_011G214800g [Phaseolus vulgaris]
          Length = 365

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTIPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNPT Q+SRPHT+FASGPPT+P    +   A  PPRPF+NG
Sbjct: 206 VLAASNPTAQKSRPHTLFASGPPTLPSVPQANGVAPLPPRPFANG 250


>ref|XP_006856079.1| hypothetical protein AMTR_s00059p00117370 [Amborella trichopoda]
           gi|548859938|gb|ERN17546.1| hypothetical protein
           AMTR_s00059p00117370 [Amborella trichopoda]
          Length = 385

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 9/54 (16%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI-PQQNGSV--------SAAIPPPRPFSNG 136
           VLA+SNP  QR+RPHT+FASGPPT  PQ NG++        S   PPPRPF+NG
Sbjct: 206 VLAASNPAAQRNRPHTLFASGPPTAPPQANGAIPNPPMAAQSQPPPPPRPFANG 259


>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNP+  +SRPHT+FASGPPT   +PQ NG++ A + PPRPF+NG
Sbjct: 206 VLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPM-PPRPFANG 252


>emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
          Length = 312

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/48 (62%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPT---IPQQNGSVSAAIPPPRPFSNG 136
           VLA+SNP+  +SRPHT+FASGPPT   +PQ NG++ A + PPRPF+NG
Sbjct: 145 VLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNMGAPM-PPRPFANG 191


>gb|EPS66244.1| hypothetical protein M569_08532, partial [Genlisea aurea]
          Length = 90

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI-PQQNGSVSAAIPPPRPFSNG 136
           VLASSNP+T R RPHTMFASGPP++ PQ NG+V     PPRPF NG
Sbjct: 34  VLASSNPSTLRHRPHTMFASGPPSLAPQPNGAVPPV--PPRPFPNG 77


>ref|XP_007046987.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508699248|gb|EOX91144.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 280

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI---PQQNGSVSAAIPPPRPFSNG 136
           VLA+SNP  Q+SRPHT+FAS PP++   PQ NG++ A + PPRPF+NG
Sbjct: 119 VLAASNPNAQKSRPHTLFASAPPSLPSGPQANGAIGAPV-PPRPFANG 165


>ref|XP_007046986.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508699247|gb|EOX91143.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 367

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI---PQQNGSVSAAIPPPRPFSNG 136
           VLA+SNP  Q+SRPHT+FAS PP++   PQ NG++ A + PPRPF+NG
Sbjct: 206 VLAASNPNAQKSRPHTLFASAPPSLPSGPQANGAIGAPV-PPRPFANG 252


>ref|XP_006425712.1| hypothetical protein CICLE_v10025862mg [Citrus clementina]
           gi|568824776|ref|XP_006466770.1| PREDICTED: splicing
           factor 3B subunit 4-like [Citrus sinensis]
           gi|557527702|gb|ESR38952.1| hypothetical protein
           CICLE_v10025862mg [Citrus clementina]
          Length = 377

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/48 (56%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +2

Query: 2   VLASSNPTTQRSRPHTMFASGPPTI---PQQNGSVSAAIPPPRPFSNG 136
           +LA++NP++Q+SRPHT+FASGPP++   PQ NG+V   + PPRP++NG
Sbjct: 206 ILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGGPV-PPRPYANG 252


Top