BLASTX nr result
ID: Mentha26_contig00032363
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00032363
(738 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 257 3e-66
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 255 1e-65
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 255 1e-65
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 251 2e-64
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 248 2e-63
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 247 3e-63
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 247 3e-63
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 247 3e-63
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 242 9e-62
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 242 1e-61
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 239 7e-61
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 238 2e-60
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 227 4e-57
ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III s... 221 2e-55
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part... 218 1e-54
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 216 9e-54
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 212 1e-52
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 212 1e-52
gb|EYU23205.1| hypothetical protein MIMGU_mgv11b022747mg, partia... 210 5e-52
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 209 6e-52
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 257 bits (657), Expect = 3e-66
Identities = 119/191 (62%), Positives = 151/191 (79%)
Frame = -3
Query: 574 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 395
M R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I KL+EV+VY G YY+ +KP+
Sbjct: 1 MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60
Query: 394 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 215
GLLDP MGPPNKSG CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS
Sbjct: 61 GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 214 RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKV 35
ILL +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NG V
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTAT-CSKCGYMNGMV 179
Query: 34 KRQQLKIIHER 2
K+ QLKI HE+
Sbjct: 180 KKLQLKITHEQ 190
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 255 bits (651), Expect = 1e-65
Identities = 117/191 (61%), Positives = 151/191 (79%)
Frame = -3
Query: 574 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 395
M+R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 394 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 215
GLLDP MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 214 RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKV 35
ILL +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NG V
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMV 179
Query: 34 KRQQLKIIHER 2
K+ QLKI HE+
Sbjct: 180 KKLQLKITHEQ 190
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 255 bits (651), Expect = 1e-65
Identities = 117/191 (61%), Positives = 151/191 (79%)
Frame = -3
Query: 574 MRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 395
M+R Q ++Q TKQPYIEDVGPRKI+SI+FS S ++I K +EV+VY G YY+ +KP+
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 394 GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 215
GLLDP MGPPNK+G CETC NF CPGH G+L LALPV+NVGY+GT+V I+KCICK CS
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120
Query: 214 RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKV 35
ILL +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG K A CS+CGY+NG V
Sbjct: 121 SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTAT-CSKCGYMNGMV 179
Query: 34 KRQQLKIIHER 2
K+ QLKI HE+
Sbjct: 180 KKLQLKITHEQ 190
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 251 bits (640), Expect = 2e-64
Identities = 120/184 (65%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
Frame = -3
Query: 547 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 368
FTKQPYIEDVGPRKI+S+QF+T SG +I KL+EVQVY+G YYD RKP+ GGLLDP MGP
Sbjct: 11 FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70
Query: 367 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 188
NK KC TC ANF +CPGH G++ LALPVFNVGY TI+ I+KCICK CSRILL+EK
Sbjct: 71 ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130
Query: 187 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR--QQLKI 14
+DFLR+MRNPKLE L+K D++K I+ KC+++ GN K+ CSRCGY+NG VK+ L I
Sbjct: 131 KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGN-KSTRCSRCGYLNGSVKKAVSMLGI 189
Query: 13 IHER 2
+H R
Sbjct: 190 LHYR 193
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 248 bits (632), Expect = 2e-63
Identities = 117/197 (59%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
Frame = -3
Query: 586 MQKEMRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRK 407
M +++++ ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R
Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60
Query: 406 PVGGGLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCIC 227
P+ GGLLDP MGP NKS C TC F+NCPGH G+LTLALPV+NVGY+ TI+ I+KCIC
Sbjct: 61 PIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCIC 120
Query: 226 KKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYV 47
K CSR+LL+EK +D+L++MRNPK+E L+K D++K+IV KC++M KAV+C RCGY+
Sbjct: 121 KYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA---SKAVKCPRCGYI 177
Query: 46 NGKVKR--QQLKIIHER 2
NG VK+ L IIH+R
Sbjct: 178 NGMVKKAVAVLGIIHDR 194
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 247 bits (631), Expect = 3e-63
Identities = 118/185 (63%), Positives = 149/185 (80%), Gaps = 2/185 (1%)
Frame = -3
Query: 550 QFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMG 371
+FTK+PYIEDVGPRKI+SIQFS LS ++I K +EVQVYQ YYD + +P+ GGLLDP MG
Sbjct: 4 KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63
Query: 370 PPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKD 191
P NKSGKC TC NF +CPGH G+L+LALPV+NVGY+ TI+ I+KCICK CSRI+L EK
Sbjct: 64 PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123
Query: 190 RQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR--QQLK 17
+D+L+RMR+PK++ LKK DI+K+IV KC++M + KAV+C RCGYVNG VK+ L
Sbjct: 124 CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAM--ASSKAVKCWRCGYVNGTVKKAVAMLG 181
Query: 16 IIHER 2
IIH+R
Sbjct: 182 IIHDR 186
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 247 bits (630), Expect = 3e-63
Identities = 116/186 (62%), Positives = 148/186 (79%), Gaps = 2/186 (1%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
+QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M
Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK
Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR--QQL 20
+D+L++MR+ K+E LKK +++K IV KC +M +KKAV+CSRCGY+NG VK+ L
Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVL 183
Query: 19 KIIHER 2
IIH+R
Sbjct: 184 GIIHDR 189
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 247 bits (630), Expect = 3e-63
Identities = 116/186 (62%), Positives = 148/186 (79%), Gaps = 2/186 (1%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
+QFTK+PYIEDVGPRKIESI+F+ S ++I K +EVQV++G YYD RKP+ GLLDP M
Sbjct: 5 IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GP NK+G C TC NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK
Sbjct: 65 GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR--QQL 20
+D+L++MR+ K+E LKK +++K IV KC +M +KKAV+CSRCGY+NG VK+ L
Sbjct: 125 ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAM-ASSKKAVKCSRCGYMNGIVKKAVSVL 183
Query: 19 KIIHER 2
IIH+R
Sbjct: 184 GIIHDR 189
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 242 bits (618), Expect = 9e-62
Identities = 112/184 (60%), Positives = 139/184 (75%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
+Q TKQPYIEDVG R+IESI FSTLSG+++ K + V+VY+G YYD +KPV GLLD M
Sbjct: 1 LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GPPNK C TC NF CPGH G+L LALPV+NVGY+ IV I+KCICK CSR+LL+EK
Sbjct: 61 GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKRQQLKI 14
+ FLR+MRNP+LE LKK D+ K IV +CNS G NK A +C RCG++NG VKR K+
Sbjct: 121 EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLA-KCPRCGHINGMVKRAPYKV 179
Query: 13 IHER 2
+++R
Sbjct: 180 MYDR 183
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 242 bits (617), Expect = 1e-61
Identities = 115/191 (60%), Positives = 146/191 (76%), Gaps = 2/191 (1%)
Frame = -3
Query: 568 RDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGL 389
+ GT+QFTK+PY+EDVGPR+IESIQFST S ++ K EV+V + YYDE RKP+ GL
Sbjct: 2 KKSGTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGL 61
Query: 388 LDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRI 209
LD MGP NKS C+TC F +CPGH G+L LALPV+NVG+ TI+ I+KCICK CSR+
Sbjct: 62 LDQRMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRV 121
Query: 208 LLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVK- 32
LL +KD Q FL++MRNPK E LKK +I K +V KCNS+ G+K+AV+CSRCGY+NG VK
Sbjct: 122 LLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSL-AGSKRAVKCSRCGYINGMVKK 180
Query: 31 -RQQLKIIHER 2
++ LKI H+R
Sbjct: 181 AKEPLKIQHDR 191
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 239 bits (610), Expect = 7e-61
Identities = 112/184 (60%), Positives = 145/184 (78%), Gaps = 2/184 (1%)
Frame = -3
Query: 547 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 368
+TKQPYIEDVGPR+I+SIQFST+SG+DI K SE QV+ G+YYD +K + GGLLD MG
Sbjct: 10 YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69
Query: 367 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 188
PNK G C+TC +FT+CPGH G+L L LPV+NVGY+ TI+ I+KCICK CSR+L+ EK R
Sbjct: 70 PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129
Query: 187 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR--QQLKI 14
+ +L+RMRNP+ E LKKN+++K IV KC+SM + KAV+C RCGY+NG VK+ + I
Sbjct: 130 KSYLKRMRNPRTEPLKKNELMKEIVKKCSSM--ASSKAVKCLRCGYMNGMVKKAGSVVGI 187
Query: 13 IHER 2
IH+R
Sbjct: 188 IHDR 191
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 238 bits (606), Expect = 2e-60
Identities = 117/212 (55%), Positives = 154/212 (72%), Gaps = 17/212 (8%)
Frame = -3
Query: 586 MQKEMRRDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRK 407
M +++++ ++ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY R
Sbjct: 1 MTQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRV 60
Query: 406 PVGGGLLDPHM---------------GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFN 272
P+ GGLLDP M GP NKS C TC F+NCPGH G+LTLALPV+N
Sbjct: 61 PIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYN 120
Query: 271 VGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMV 92
VGY+ TI+ I+KCICK CSR+LL+EK +D+L++MRNPK+E L+K D++K+IV KC++M
Sbjct: 121 VGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMA 180
Query: 91 GGNKKAVECSRCGYVNGKVKR--QQLKIIHER 2
KAV+C RCGY+NG VK+ L IIH+R
Sbjct: 181 ---SKAVKCPRCGYINGMVKKAVAVLGIIHDR 209
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 227 bits (578), Expect = 4e-57
Identities = 106/177 (59%), Positives = 139/177 (78%), Gaps = 1/177 (0%)
Frame = -3
Query: 568 RDQG-TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGG 392
RDQ + FTKQP++EDVGPR+I+S+QF+ S ++I K++EVQV++G+YYD RKPV G
Sbjct: 5 RDQAQNILFTKQPFVEDVGPRRIKSMQFTVQSASEISKMAEVQVWKGQYYDPNRKPVEDG 64
Query: 391 LLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSR 212
LLDP MGP NK +C TC F++CPGH G+L LALPV+NVGY+ TI+ I+KCICK CSR
Sbjct: 65 LLDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILDILKCICKSCSR 124
Query: 211 ILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNG 41
ILL EK R+DFL++MR+ K+E LKK +++K IV KCNS KAV+CS+CGY+NG
Sbjct: 125 ILLDEKLRKDFLKKMRSSKMEPLKKGELMKKIVKKCNS------KAVKCSKCGYING 175
>ref|XP_004166766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like,
partial [Cucumis sativus]
Length = 286
Score = 221 bits (563), Expect = 2e-55
Identities = 110/182 (60%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
Frame = -3
Query: 547 FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 368
FTKQPYIEDVGPRKI +QF+T SG +I KL+EVQVY+G YYD RKP+ GGLLDP MGP
Sbjct: 11 FTKQPYIEDVGPRKI--MQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 68
Query: 367 PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 188
NK KC TC ANF +CPGH G++ LALPVFNVGY TI+ I+KCICK CSRILL+EK
Sbjct: 69 ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 128
Query: 187 QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGN-KKAVECSRCGYVNGKVKRQQLKII 11
+DFLR+MRNPKLE L+K D++K I+ KC+++ G+ KKAV S G ++ + + + ++
Sbjct: 129 KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGSVKKAV--SMLGILHYRARSKDAGVV 186
Query: 10 HE 5
E
Sbjct: 187 SE 188
>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
gi|462403787|gb|EMJ09344.1| hypothetical protein
PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 218 bits (556), Expect = 1e-54
Identities = 108/197 (54%), Positives = 143/197 (72%), Gaps = 4/197 (2%)
Frame = -3
Query: 580 KEMRRDQG-TMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKP 404
+ M R Q T+ FTKQP+IED G RKIE QFS +S T+I ++E Q+Y+ YYD +KP
Sbjct: 2 RTMNRGQAKTLIFTKQPFIEDEGHRKIEKWQFSAMSDTEIVNMAETQIYKCNYYDPNQKP 61
Query: 403 VGGGLLDPHMGPPNKS-GKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCIC 227
+ GGLLDP +GP NKS G+C TC A +CPGH G L LALPV NVGY+ T+V I+KCIC
Sbjct: 62 IEGGLLDPRLGPANKSSGECATCGAVMKDCPGHFGFLVLALPVLNVGYLSTVVDILKCIC 121
Query: 226 KKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYV 47
K CS ILL+E R DFL++MR+PK+E L+K +++K IV KCN++ N + V+CS+CG++
Sbjct: 122 KLCSGILLEEGMRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLT-TNYRPVKCSKCGFI 180
Query: 46 NGKVKRQ--QLKIIHER 2
NG VK+ L IIH+R
Sbjct: 181 NGSVKKAVGVLGIIHDR 197
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 216 bits (549), Expect = 9e-54
Identities = 99/175 (56%), Positives = 130/175 (74%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
++FTKQPYIEDVGP KI+SI FS S +I K +EVQV++ YY+ KPV GGLLDP M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPRM 66
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GPPNK C TC A+F NCPGH G+L L LPV+NVG++ I+ I+KCICK+CS IL+ EK
Sbjct: 67 GPPNKKSICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCSNILIDEK 126
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR 29
+D L++MRNPK+E LKK ++ KA+V KC+ M +++ + C CGY+NG VK+
Sbjct: 127 LYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMM--ASQRIITCKNCGYLNGMVKK 179
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 212 bits (539), Expect = 1e-52
Identities = 97/175 (55%), Positives = 128/175 (73%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
+++TK+PYIEDVG KI+SI FS LS ++ K +EVQV++ YYD KP GGLLDP M
Sbjct: 7 IEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGLLDPRM 66
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GPPNK C TC NF NCPGH G+L L LPV+N+GY I+ I+KCICK CS +LL EK
Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCSNMLLDEK 126
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR 29
+D LR+MRNPK+E LKK ++ KA+V KC++M +++ + C +CGY+NG VK+
Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTM--ASQRIITCKKCGYLNGMVKK 179
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 212 bits (539), Expect = 1e-52
Identities = 97/175 (55%), Positives = 128/175 (73%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
++FTKQPYIEDVGP KI+SI FS LS ++ K +EVQV++ YY+ KP GLLD M
Sbjct: 7 IEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDARM 66
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GPPNK C TC NF NCPGH G+L L LPV+NVG+ I+ I+KCICK+CS +LL EK
Sbjct: 67 GPPNKKSICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCSNMLLDEK 126
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR 29
+D LR+MRNPK+E LKK ++ KA+V KC++M +++ + C +CGY+NG VK+
Sbjct: 127 LYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTM--ASQRIITCKKCGYLNGMVKK 179
>gb|EYU23205.1| hypothetical protein MIMGU_mgv11b022747mg, partial [Mimulus
guttatus]
Length = 260
Score = 210 bits (534), Expect = 5e-52
Identities = 103/179 (57%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = -3
Query: 568 RDQGTMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGL 389
+ GT+QFTK+PY+EDVGPR+IESIQFST S ++ K EV+V + YYDE RKP+ GL
Sbjct: 39 KKSGTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGL 98
Query: 388 LDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRI 209
LD MGP NKS C+TC F CPGH G+L LALPV+NVG+ TI+ I+KCICK CSR+
Sbjct: 99 LDLRMGPANKSILCKTCGGKFAECPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRV 158
Query: 208 LLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGN-KKAVECSRCGYVNGKV 35
LL +KD Q FL++MRNPK E LKK +I K +V KCNS+ G KKA E + + KV
Sbjct: 159 LLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGRMVKKAKEPLKIQHDRAKV 217
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 209 bits (533), Expect = 6e-52
Identities = 97/175 (55%), Positives = 127/175 (72%)
Frame = -3
Query: 553 MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 374
++FTK+PYIEDVGP KI+SI FS LS ++ K +EVQV+ YD KP GLLDP M
Sbjct: 7 IEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPRM 66
Query: 373 GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 194
GPPNK C TC NF NCPGH G+L L LPV+NVGY I+ I+KCICK+CS +LL EK
Sbjct: 67 GPPNKKSICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCSNMLLDEK 126
Query: 193 DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNKKAVECSRCGYVNGKVKR 29
+D LR+MRNP++E LKK ++ KA+V KC++M +++ + C +CGY+NG VK+
Sbjct: 127 LYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTM--ASQRIITCKKCGYLNGMVKK 179