BLASTX nr result

ID: Mentha26_contig00032028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00032028
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350536.1| PREDICTED: soluble starch synthase 1, chloro...    72   1e-10
ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amy...    72   1e-10
ref|XP_004234971.1| PREDICTED: soluble starch synthase 1, chloro...    70   4e-10

>ref|XP_006350536.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like isoform X2 [Solanum
           tuberosum]
          Length = 641

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
 Frame = +2

Query: 95  RVVDCLSGVKQVGFGP--LLSGKR--KGRSLCVRARLYKEDKNAQNKETEEGILLGTERD 262
           RVV  L   +QVG G   LL G+R  K +SLCV + +      A+NK+  EG+LLG ERD
Sbjct: 21  RVVRGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKKVSEGLLLGAERD 80

Query: 263 GSGSVVGFNLIPHS--ANERVLETQQVEANGVTKISE 367
           GSGSVVGF LIPHS   +  ++E+  + AN    +SE
Sbjct: 81  GSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSE 117


>ref|NP_001275074.1| soluble starch synthase 1, chloroplastic/amyloplastic [Solanum
           tuberosum] gi|2829792|sp|P93568.1|SSY1_SOLTU RecName:
           Full=Soluble starch synthase 1,
           chloroplastic/amyloplastic; AltName: Full=Soluble starch
           synthase I; Short=SS I; Flags: Precursor
           gi|1781353|emb|CAA71442.1| soluble starch (bacterial
           glycogen) synthase [Solanum tuberosum]
          Length = 641

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
 Frame = +2

Query: 95  RVVDCLSGVKQVGFGP--LLSGKR--KGRSLCVRARLYKEDKNAQNKETEEGILLGTERD 262
           RVV  L   +QVG G   LL G+R  K +SLCV + +      A+NK   EG+LLG ERD
Sbjct: 21  RVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKNVSEGLLLGAERD 80

Query: 263 GSGSVVGFNLIPHS--ANERVLETQQVEANGVTKISE 367
           GSGSVVGF LIPHS   +  ++E+  + AN    +SE
Sbjct: 81  GSGSVVGFQLIPHSVAGDATMVESHDIVANDRDDLSE 117


>ref|XP_004234971.1| PREDICTED: soluble starch synthase 1,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 641

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +2

Query: 95  RVVDCLSGVKQVGFGP--LLSGKR--KGRSLCVRARLYKEDKNAQNKETEEGILLGTERD 262
           RVV  L   +QVG G   LL G+R  K +SLCV + +      A+NK+  EG+LLG ERD
Sbjct: 21  RVVKGLRVERQVGLGFSWLLKGRRNRKVQSLCVTSSVSDGSSIAENKKVSEGLLLGPERD 80

Query: 263 GSGSVVGFNLIPHS--ANERVLETQQVEAN 346
           GSGSVVGF LIPHS   +  ++E+  + AN
Sbjct: 81  GSGSVVGFQLIPHSVAGDATMVESHDIVAN 110


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