BLASTX nr result

ID: Mentha26_contig00031920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00031920
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    75   1e-11
ref|XP_007011141.1| F-box and associated interaction domains-con...    60   3e-07

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590586605|ref|XP_007015751.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
 Frame = -3

Query: 390 LSFDFSTETLSTLPIPP--DTRYPHVHSIFEYDGLLSVLAYSPNETVPSSYDLWIMKKGC 217
           LSFD + E  STLP+P    +   +   + +++G L  + Y P E    S DLW+M  G 
Sbjct: 240 LSFDMANEKFSTLPLPTFGGSLAQYYLQLLDFNGSLGAIVY-PREGTEKSIDLWVMN-GS 297

Query: 216 WINT-SVFSTCGIQSPVCFSKSGRLLYFESMDDELLVFDRATGKLKHLGIYCFSNRIK 46
           W    S+ S  G++ P+ F K+G L + ES + EL++FD AT +LK+LGI+ + N ++
Sbjct: 298 WTRQFSIESVSGVERPLGFWKNGEL-FLESSNHELVLFDPATRELKNLGIHAYQNTMQ 354


>ref|XP_007011141.1| F-box and associated interaction domains-containing protein
           [Theobroma cacao] gi|508728054|gb|EOY19951.1| F-box and
           associated interaction domains-containing protein
           [Theobroma cacao]
          Length = 460

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
 Frame = -3

Query: 390 LSFDFSTETLSTLPIPP-----DTRYPHVHSIFEYDGLLSVLAYSPNETVPSSYDLWIMK 226
           LSFD + +  STLP+P      D    H+ S  E     + +  SP   + + YD+W++ 
Sbjct: 347 LSFDMAEDVFSTLPLPNFGMSNDECLWHITSFNE----AAAVTVSPTTGMENKYDIWVLS 402

Query: 225 KGCWINTSVFSTCGIQSPVCFSKSGRLLYFESMDDELLVFDRATGKLKHLGIYCFSNR 52
              W       +     P+ F K+G LL  ES +D L++FD  TG+L+  GI C S +
Sbjct: 403 GHSWTKQLTIGSI-FGRPLAFWKNGELL-LESENDTLVMFDTCTGELQDFGITCLSTQ 458


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