BLASTX nr result

ID: Mentha26_contig00031039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00031039
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74711.1| succinate dehydrogenase subunit 3, partial [Genli...    62   6e-08
gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion)...    59   7e-07
gb|ACH42356.1| succinate dehydrogenase subunit 3, partial (mitoc...    57   2e-06
gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Goss...    57   3e-06
gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitoc...    57   3e-06
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...    56   5e-06
ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita...    56   6e-06
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola...    56   6e-06

>gb|EPS74711.1| succinate dehydrogenase subunit 3, partial [Genlisea aurea]
          Length = 97

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/62 (48%), Positives = 41/62 (66%)
 Frame = +3

Query: 3   TNRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLV 182
           +NRIS   LTT+   +  L LK+  IC   E++YQ   YSSKL  IS++ITALA +YH+ 
Sbjct: 25  SNRISGAFLTTIVFFFYLLCLKIGLICFTYENVYQIFFYSSKLILISVEITALALLYHIT 84

Query: 183 HG 188
           +G
Sbjct: 85  NG 86


>gb|AGL75423.1| succinate dehydrogenase subunit 3 (mitochondrion) [Utricularia
           gibba]
          Length = 104

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +3

Query: 3   TNRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLV 182
           +NRIS   L T+   +  L LK+  IC   E++YQ   YSSKL  IS++ITALA  YH+ 
Sbjct: 25  SNRISGAFLATIVFFFYLLCLKIGLICFTYENVYQFFFYSSKLILISVEITALALSYHIT 84

Query: 183 HG 188
           +G
Sbjct: 85  NG 86


>gb|ACH42356.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
           [Eschscholzia californica]
          Length = 76

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = +3

Query: 6   NRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLVH 185
           +RIS   L T+ L    L LK+  IC   E+ YQ L YSSKL  IS++ITALA  YHL +
Sbjct: 15  HRISGAFLATIVLFSYLLCLKIGLICFTYENFYQLLFYSSKLILISVEITALALSYHLYN 74

Query: 186 G 188
           G
Sbjct: 75  G 75


>gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum]
          Length = 201

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/62 (45%), Positives = 37/62 (59%)
 Frame = +3

Query: 3   TNRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLV 182
           TNRIS + LTT  L    L+LK+  IC    + YQ   YS+KL  +++ I ALA  YHL 
Sbjct: 127 TNRISGVFLTTALLFSYLLSLKMGSICFTYSNFYQFFFYSAKLAPVTVSIAALAVSYHLC 186

Query: 183 HG 188
           +G
Sbjct: 187 YG 188


>gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
           [Nymphaea tetragona]
          Length = 79

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/60 (51%), Positives = 38/60 (63%)
 Frame = +3

Query: 3   TNRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLV 182
           ++RIS   L T+ L    L LK+  IC   E+ YQ L YSSKL  ISL+ITALA  YHL+
Sbjct: 20  SHRISGAFLVTIVLFSYLLCLKIGLICFTYENFYQFLFYSSKLIPISLEITALALSYHLL 79


>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = +3

Query: 3   TNRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLV 182
           ++RIS   L T+   +  L LK+  IC   E+ YQ   YSSKL  IS++ITALA  YHL 
Sbjct: 25  SHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFFYSSKLILISVEITALALSYHLY 84

Query: 183 HG 188
           +G
Sbjct: 85  NG 86


>ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita pepo]
           gi|259156837|gb|ACV96698.1| succinate dehydrogenase
           subunit 3 [Cucurbita pepo]
          Length = 105

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/61 (49%), Positives = 38/61 (62%)
 Frame = +3

Query: 6   NRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLVH 185
           +RIS   L T+ L +  L LK+  IC  +ES Y+   YSSKL  IS++ITALA  YHL  
Sbjct: 26  HRISGAFLATLVLFFYLLCLKMGLICFTHESFYRFFFYSSKLILISVEITALALSYHLYK 85

Query: 186 G 188
           G
Sbjct: 86  G 86


>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
           gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = +3

Query: 6   NRISAIILTTVPLSYAFLTLKVAPICLANESIYQALHYSSKLGTISLQITALAAVYHLVH 185
           +RIS   L T+   +  L LK+  IC   E+ YQ   YSSKL  IS++ITALA  YHL +
Sbjct: 26  HRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFFYSSKLILISVEITALALSYHLYN 85

Query: 186 G 188
           G
Sbjct: 86  G 86


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