BLASTX nr result
ID: Mentha26_contig00030618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00030618
(419 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partia... 97 2e-18
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 97 2e-18
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer... 96 7e-18
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 96 7e-18
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 95 9e-18
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 95 9e-18
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps... 92 7e-17
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub... 91 1e-16
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 91 1e-16
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 91 2e-16
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 91 2e-16
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 91 2e-16
gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase ... 90 3e-16
gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, pu... 90 3e-16
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 90 3e-16
dbj|BAF01996.1| putative DNA-directed RNA polymerase subunit [Ar... 90 3e-16
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca... 90 4e-16
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab... 89 5e-16
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 89 6e-16
ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutr... 89 8e-16
>gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partial [Mimulus guttatus]
Length = 1028
Score = 97.4 bits (241), Expect = 2e-18
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
+QS+ +RDMI + ++LP G + PKKVTCV CQTSKGMETV+MPYVFRYLAAELAAM
Sbjct: 958 IQSNTKAIRDMI-VGRDLPGG---RTPKKVTCVVCQTSKGMETVSMPYVFRYLAAELAAM 1013
Query: 181 NIKMTLQL-SNGAGA 222
NIKMTL+L S+GAGA
Sbjct: 1014 NIKMTLELSSSGAGA 1028
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
+Q K VR++ LPPG + PKKVTC +CQTSKGMETV+MPY+FR+LAAELAAM
Sbjct: 1076 IQPQKRAVREI----GGLPPGRA---PKKVTCHACQTSKGMETVSMPYIFRFLAAELAAM 1128
Query: 181 NIKMTLQLSNGAGA 222
NIKMTLQLSNGAGA
Sbjct: 1129 NIKMTLQLSNGAGA 1142
>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Glycine max]
Length = 1004
Score = 95.5 bits (236), Expect = 7e-18
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +1
Query: 4 QSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMN 183
Q K VR++ LPPG + PKKVTC +CQTSKGMETVAMPYVFRYLAAELAAMN
Sbjct: 937 QPQKRPVREI----GGLPPGRA---PKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMN 989
Query: 184 IKMTLQLSNGAGA 222
IKMTL+LS+GAGA
Sbjct: 990 IKMTLKLSDGAGA 1002
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 95.5 bits (236), Expect = 7e-18
Identities = 52/73 (71%), Positives = 58/73 (79%)
Frame = +1
Query: 4 QSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMN 183
Q K VR++ LPPG + PKKVTC +CQTSKGMETVAMPYVFRYLAAELAAMN
Sbjct: 1108 QPQKRPVREI----GGLPPGRA---PKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMN 1160
Query: 184 IKMTLQLSNGAGA 222
IKMTL+LS+GAGA
Sbjct: 1161 IKMTLKLSDGAGA 1173
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
[Glycine max]
Length = 1151
Score = 95.1 bits (235), Expect = 9e-18
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
+Q K VR++ LPPG + PKKVTC +CQTSKGMETVAMPYVFRYLAAELAAM
Sbjct: 1083 IQPQKRPVREI----GGLPPGRA---PKKVTCHACQTSKGMETVAMPYVFRYLAAELAAM 1135
Query: 181 NIKMTLQLSNGAG 219
NIKMTL+LS+GAG
Sbjct: 1136 NIKMTLKLSDGAG 1148
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
[Glycine max]
Length = 1175
Score = 95.1 bits (235), Expect = 9e-18
Identities = 51/73 (69%), Positives = 58/73 (79%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
+Q K VR++ LPPG + PKKVTC +CQTSKGMETVAMPYVFRYLAAELAAM
Sbjct: 1107 IQPQKRPVREI----GGLPPGRA---PKKVTCHACQTSKGMETVAMPYVFRYLAAELAAM 1159
Query: 181 NIKMTLQLSNGAG 219
NIKMTL+LS+GAG
Sbjct: 1160 NIKMTLKLSDGAG 1172
>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
gi|482575323|gb|EOA39510.1| hypothetical protein
CARUB_v10008127mg [Capsella rubella]
Length = 1171
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = +1
Query: 25 RDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQL 204
+ +I + LPPG + PKKVTC SC+TSKGMETVAMPYVFRYLAAELA+MNIKMTL+L
Sbjct: 1102 KKLIQVTGKLPPG---RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLKL 1158
Query: 205 SNGAGA*DL 231
S+ G DL
Sbjct: 1159 SDREGDEDL 1167
>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 719
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/72 (69%), Positives = 57/72 (79%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
VQ K VR++ LPPG K PK+VTC +C+TSKGMETVAMPYVF+YLAAELAAM
Sbjct: 654 VQPPKRAVREI----GGLPPG---KAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM 706
Query: 181 NIKMTLQLSNGA 216
NIKMTLQLS+GA
Sbjct: 707 NIKMTLQLSSGA 718
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/72 (69%), Positives = 57/72 (79%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
VQ K VR++ LPPG K PK+VTC +C+TSKGMETVAMPYVF+YLAAELAAM
Sbjct: 1108 VQPPKRAVREI----GGLPPG---KAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAM 1160
Query: 181 NIKMTLQLSNGA 216
NIKMTLQLS+GA
Sbjct: 1161 NIKMTLQLSSGA 1172
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/74 (67%), Positives = 57/74 (77%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
VQ K VR++ LPP + PKKVTC +CQTSKGMETVAMPYVFRYLAAELAAM
Sbjct: 1114 VQPPKRVVREI----GGLPPARA---PKKVTCHACQTSKGMETVAMPYVFRYLAAELAAM 1166
Query: 181 NIKMTLQLSNGAGA 222
NI MT+QL++GAGA
Sbjct: 1167 NITMTIQLNSGAGA 1180
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1
Query: 40 IKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAG 219
I K LP ++PKKVTCV+C++SKGMETVAMPYVF+YLAAELAAMNIKMTL+LSN AG
Sbjct: 1123 ILKQLPA----REPKKVTCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAG 1178
Query: 220 A 222
A
Sbjct: 1179 A 1179
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1
Query: 40 IKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAG 219
I K LP ++PKKVTCV+C++SKGMETVAMPYVF+YLAAELAAMNIKMTL+LSN AG
Sbjct: 1128 ILKQLPA----REPKKVTCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAG 1183
Query: 220 A 222
A
Sbjct: 1184 A 1184
>gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 1233
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +1
Query: 52 LPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA*D 228
LPPG + PKKVTC SC+TSKGMETVAMPYVFRYLAAELA+MNIKMTLQLS+ G D
Sbjct: 1178 LPPG---RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD 1233
>gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, putative; 8546-1198 [Arabidopsis
thaliana]
Length = 1114
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +1
Query: 52 LPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA*D 228
LPPG + PKKVTC SC+TSKGMETVAMPYVFRYLAAELA+MNIKMTLQLS+ G D
Sbjct: 1059 LPPG---RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD 1114
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +1
Query: 52 LPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA*D 228
LPPG + PKKVTC SC+TSKGMETVAMPYVFRYLAAELA+MNIKMTLQLS+ G D
Sbjct: 1123 LPPG---RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD 1178
>dbj|BAF01996.1| putative DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 578
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +1
Query: 52 LPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA*D 228
LPPG + PKKVTC SC+TSKGMETVAMPYVFRYLAAELA+MNIKMTLQLS+ G D
Sbjct: 523 LPPG---RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSDREGVTD 578
>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1341
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/76 (61%), Positives = 55/76 (72%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
++ K VRD +P + P+KVTC +CQTSKGMETVAMPY+FRYLAAELAAM
Sbjct: 1270 IEPQKRPVRD-------IPGIPVRRAPRKVTCHACQTSKGMETVAMPYIFRYLAAELAAM 1322
Query: 181 NIKMTLQLSNGAGA*D 228
NIKMTL+LSNGA D
Sbjct: 1323 NIKMTLKLSNGANVSD 1338
>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
Length = 1188
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = +1
Query: 25 RDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQL 204
+ +I + LPPG + PKKVTC SC TSKGMETVAMPYVFRYLAAELA+MNIKMTLQL
Sbjct: 1122 KKLIKVNGKLPPG---RTPKKVTCHSCGTSKGMETVAMPYVFRYLAAELASMNIKMTLQL 1178
Query: 205 SN 210
S+
Sbjct: 1179 SD 1180
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/72 (68%), Positives = 54/72 (75%)
Frame = +1
Query: 1 VQSHKTEVRDMINIKKNLPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAM 180
+Q+ K VRD+ LPP + PKKV C SCQTSKGMETVAMPYVFRYLAAELAAM
Sbjct: 1093 IQTQKRVVRDI----GGLPPVGA---PKKVACHSCQTSKGMETVAMPYVFRYLAAELAAM 1145
Query: 181 NIKMTLQLSNGA 216
NIKM +QLS GA
Sbjct: 1146 NIKMNVQLSGGA 1157
>ref|XP_006415533.1| hypothetical protein EUTSA_v10006600mg [Eutrema salsugineum]
gi|557093304|gb|ESQ33886.1| hypothetical protein
EUTSA_v10006600mg [Eutrema salsugineum]
Length = 1181
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/57 (78%), Positives = 49/57 (85%)
Frame = +1
Query: 52 LPPGSSNKDPKKVTCVSCQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGAGA 222
LPPG + PKKVTC SC+TSKGMETVAMPYVFRYL AELAAMNIKMTLQLS+ G+
Sbjct: 1123 LPPG---RTPKKVTCDSCKTSKGMETVAMPYVFRYLVAELAAMNIKMTLQLSDREGS 1176