BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00028730
         (1148 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer...   443   e-122
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   443   e-122
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   442   e-121
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   442   e-121
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   440   e-121
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   439   e-120
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   438   e-120
gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partia...   437   e-120
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   434   e-119
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...   430   e-118
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   429   e-117
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   429   e-117
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   429   e-117
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   429   e-117
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca...   429   e-117
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [...   427   e-117
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   427   e-117
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   426   e-117
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...   423   e-116
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...   421   e-115

>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Glycine max]
          Length = 1004

 Score =  443 bits (1140), Expect = e-122
 Identities = 223/303 (73%), Positives = 243/303 (80%), Gaps = 1/303 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 706  HLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFP 765

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L G FVDATPF                            +GF
Sbjct: 766  SRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGF 825

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI     
Sbjct: 826  NYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKR 885

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGS+LTTT  Q QK  +R+
Sbjct: 886  GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVRE 945

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPPG  + PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIKMTL+LS+G
Sbjct: 946  I----GGLPPG--RAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDG 999

Query: 898  AGA 906
            AGA
Sbjct: 1000 AGA 1002


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score =  443 bits (1140), Expect = e-122
 Identities = 223/303 (73%), Positives = 243/303 (80%), Gaps = 1/303 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 877  HLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFP 936

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L G FVDATPF                            +GF
Sbjct: 937  SRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGF 996

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI     
Sbjct: 997  NYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKR 1056

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGS+LTTT  Q QK  +R+
Sbjct: 1057 GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVRE 1116

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPPG  + PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIKMTL+LS+G
Sbjct: 1117 I----GGLPPG--RAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDG 1170

Query: 898  AGA 906
            AGA
Sbjct: 1171 AGA 1173


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  442 bits (1136), Expect = e-121
 Identities = 221/302 (73%), Positives = 242/302 (80%), Gaps = 1/302 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 853  HLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFP 912

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L G FVDATPF                            +GF
Sbjct: 913  SRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGF 972

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI     
Sbjct: 973  NYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKR 1032

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGS+L TT +Q QK  +R+
Sbjct: 1033 GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVRE 1092

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPPG  + PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIKMTL+LS+G
Sbjct: 1093 I----GGLPPG--RAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDG 1146

Query: 898  AG 903
            AG
Sbjct: 1147 AG 1148


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  442 bits (1136), Expect = e-121
 Identities = 221/302 (73%), Positives = 242/302 (80%), Gaps = 1/302 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 877  HLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFP 936

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L G FVDATPF                            +GF
Sbjct: 937  SRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGF 996

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI     
Sbjct: 997  NYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKR 1056

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGS+L TT +Q QK  +R+
Sbjct: 1057 GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVRE 1116

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPPG  + PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIKMTL+LS+G
Sbjct: 1117 I----GGLPPG--RAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSDG 1170

Query: 898  AG 903
            AG
Sbjct: 1171 AG 1172


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  440 bits (1132), Expect = e-121
 Identities = 221/303 (72%), Positives = 242/303 (79%), Gaps = 1/303 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H QK N+RFR PRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 846  HPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFP 905

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXR-GF 357
            SRMTIAMLLES+AAKGG+L+G FVDATPF                             GF
Sbjct: 906  SRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGF 965

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHGVEVLYSG YGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ T+QPI     
Sbjct: 966  NYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKR 1025

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDS+LAHGAAYLLHDRLHT SDHHIADVCSLCGSILTT+++Q QK  +R+
Sbjct: 1026 GGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRAVRE 1085

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPPG  + PKKVTC +C+TSKGMETV+MPY+FR+LAAELAAMNIKMTLQLSNG
Sbjct: 1086 I----GGLPPG--RAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNG 1139

Query: 898  AGA 906
            AGA
Sbjct: 1140 AGA 1142


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  439 bits (1128), Expect = e-120
 Identities = 220/303 (72%), Positives = 246/303 (81%), Gaps = 1/303 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QKAN+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 884  HLQKANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFP 943

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L+G FVDATPF                            RGF
Sbjct: 944  SRMTIAMLLESVAAKGGSLHGKFVDATPFSDSVKEAKGKTEAESESLVDELGSMLRARGF 1003

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDK+QVR+TG+VDQ T+QPI     
Sbjct: 1004 NYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKR 1063

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERD++LAHGAAYLLHDRLHT SD+HIADVCSLCGSILTT++VQ  K  +R+
Sbjct: 1064 GGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSIVQPPKRVVRE 1123

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +      LPP  ++ PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNI MT+QL++G
Sbjct: 1124 I----GGLPP--ARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNITMTIQLNSG 1177

Query: 898  AGA 906
            AGA
Sbjct: 1178 AGA 1180


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  438 bits (1126), Expect = e-120
 Identities = 221/302 (73%), Positives = 240/302 (79%), Gaps = 2/302 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 862  HLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFP 921

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXR--G 354
            SRMTIAMLLES+AAKGG+LNG FVDATPF                           R  G
Sbjct: 922  SRMTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHG 981

Query: 355  FNYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXX 534
            FNYHGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ T+QPI    
Sbjct: 982  FNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRK 1041

Query: 535  XXXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIR 714
                +RFGEMERD++LAHGAAYLLHDRLHT SD+HIADVCSLCGSILTT+ +Q+QK  +R
Sbjct: 1042 RGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVR 1101

Query: 715  DMINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSN 894
            D+      LPP  +  PKKV C SC+TSKGMETVAMPYVFRYLAAELAAMNIKM +QLS 
Sbjct: 1102 DI----GGLPPVGA--PKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMNVQLSG 1155

Query: 895  GA 900
            GA
Sbjct: 1156 GA 1157


>gb|EYU27090.1| hypothetical protein MIMGU_mgv1a0004241mg, partial [Mimulus guttatus]
          Length = 1028

 Score =  437 bits (1124), Expect = e-120
 Identities = 224/303 (73%), Positives = 247/303 (81%), Gaps = 2/303 (0%)
 Frame = +1

Query: 4    IQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPS 183
            +QKAN+RFR+PRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG +GMRPDLIINPHAFPS
Sbjct: 729  MQKANIRFRYPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVSGMRPDLIINPHAFPS 788

Query: 184  RMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGFN 360
            RMTI MLLES+AAKGGA++G FVDATPF                            RGFN
Sbjct: 789  RMTIGMLLESMAAKGGAMDGKFVDATPFSSSVKNSSEESGSELTSLVDELGSKLIARGFN 848

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VD+ T+QPI      
Sbjct: 849  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGIVDEVTRQPIKGRKRG 908

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              VRFGEMERDSLLAHGAAYLLHDRLH SSDHHIA+VCS+CGSILTT+++QS    IRDM
Sbjct: 909  GGVRFGEMERDSLLAHGAAYLLHDRLHMSSDHHIANVCSICGSILTTSIIQSNTKAIRDM 968

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQL-SNG 897
            I + ++LP G  + PKKVTCV C+TSKGMETV+MPYVFRYLAAELAAMNIKMTL+L S+G
Sbjct: 969  I-VGRDLPGG--RTPKKVTCVVCQTSKGMETVSMPYVFRYLAAELAAMNIKMTLELSSSG 1025

Query: 898  AGA 906
            AGA
Sbjct: 1026 AGA 1028


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  434 bits (1115), Expect = e-119
 Identities = 218/302 (72%), Positives = 241/302 (79%), Gaps = 2/302 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            HIQK N+RFRHPRNPVIGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 877  HIQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFP 936

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLES+AAKGG+L G FVDATPF                            +GF
Sbjct: 937  SRMTIAMLLESVAAKGGSLRGEFVDATPFRSSTKKDGEGSDSKSGSLVDDLGVLLKEKGF 996

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NYHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI     
Sbjct: 997  NYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKR 1056

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGS+L+TT +Q QK  +R 
Sbjct: 1057 GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLSTTFIQPQKRPVRQ 1116

Query: 718  MINIKK-NLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSN 894
            +  +    LPPG  +  KKV+C +C+TSKGMETVAMPYVFRYLAAELAAMNIKMTL+L++
Sbjct: 1117 IGGLPPGRLPPG--RAAKKVSCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLND 1174

Query: 895  GA 900
            GA
Sbjct: 1175 GA 1176


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score =  430 bits (1106), Expect = e-118
 Identities = 219/304 (72%), Positives = 239/304 (78%), Gaps = 2/304 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 873  HLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFP 932

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPF--XXXXXXXXXXXXXXXXXXXXXXXXXXXRG 354
            SRMTIAMLLES+AAKGG+L+G FVDATPF                             +G
Sbjct: 933  SRMTIAMLLESVAAKGGSLHGKFVDATPFANSEKKVNEETNGEKSKTLVDELGEMLKVKG 992

Query: 355  FNYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXX 534
            FNY+G EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ T+QPI    
Sbjct: 993  FNYYGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRK 1052

Query: 535  XXXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIR 714
                +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGSILTT+ VQ Q   +R
Sbjct: 1053 RGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSSVQPQ-VPVR 1111

Query: 715  DMINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSN 894
            ++      +PP   + PKKVTC +CKTSKGMETVAMPYVFRYLAAELAAMNIK+ LQLSN
Sbjct: 1112 EI----PGMPP--MRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKLNLQLSN 1165

Query: 895  GAGA 906
              GA
Sbjct: 1166 ATGA 1169


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  429 bits (1103), Expect = e-117
 Identities = 217/302 (71%), Positives = 239/302 (79%), Gaps = 2/302 (0%)
 Frame = +1

Query: 7    QKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSR 186
            QKAN+RFRH RNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSR
Sbjct: 880  QKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 939

Query: 187  MTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXR--GFN 360
            MTIAMLLES+AAKGG+L+G F+DATPF                           R  GFN
Sbjct: 940  MTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFN 999

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI      
Sbjct: 1000 YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRG 1059

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              +RFGEMERDSLLAHGAAYLLHDRLHT SD+H+ADVCSLCGS+LT T +  QK  IR++
Sbjct: 1060 GGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREI 1119

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
                  LPP  ++ PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIK+TLQL +GA
Sbjct: 1120 ----GGLPP--ARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGA 1173

Query: 901  GA 906
             A
Sbjct: 1174 TA 1175


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  429 bits (1103), Expect = e-117
 Identities = 217/302 (71%), Positives = 239/302 (79%), Gaps = 2/302 (0%)
 Frame = +1

Query: 7    QKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSR 186
            QKAN+RFRH RNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPSR
Sbjct: 787  QKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 846

Query: 187  MTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXR--GFN 360
            MTIAMLLES+AAKGG+L+G F+DATPF                           R  GFN
Sbjct: 847  MTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFN 906

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG +DQ T+QPI      
Sbjct: 907  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRG 966

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              +RFGEMERDSLLAHGAAYLLHDRLHT SD+H+ADVCSLCGS+LT T +  QK  IR++
Sbjct: 967  GGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAIREI 1026

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
                  LPP  ++ PKKVTC +C+TSKGMETVAMPYVFRYLAAELAAMNIK+TLQL +GA
Sbjct: 1027 ----GGLPP--ARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGA 1080

Query: 901  GA 906
             A
Sbjct: 1081 TA 1082


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 719

 Score =  429 bits (1102), Expect = e-117
 Identities = 215/300 (71%), Positives = 238/300 (79%), Gaps = 2/300 (0%)
 Frame = +1

Query: 7    QKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSR 186
            QK N+RFR PRNP+IGDKFSSRHGQKGVCSQLW D DMPF GATGMRPDLIINPHAFPSR
Sbjct: 425  QKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSR 484

Query: 187  MTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX--RGFN 360
            MTIAML+ES+AAKGG LNG FV+ATPF                             +GFN
Sbjct: 485  MTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFN 544

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDK+QVRSTG VDQ T+QPI      
Sbjct: 545  YHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKG 604

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              +RFGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGS+LT++ VQ  K  +R++
Sbjct: 605  GGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREI 664

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
                  LPPG  K PK+VTC +CKTSKGMETVAMPYVF+YLAAELAAMNIKMTLQLS+GA
Sbjct: 665  ----GGLPPG--KAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSSGA 718


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  429 bits (1102), Expect = e-117
 Identities = 215/300 (71%), Positives = 238/300 (79%), Gaps = 2/300 (0%)
 Frame = +1

Query: 7    QKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPSR 186
            QK N+RFR PRNP+IGDKFSSRHGQKGVCSQLW D DMPF GATGMRPDLIINPHAFPSR
Sbjct: 879  QKVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSR 938

Query: 187  MTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX--RGFN 360
            MTIAML+ES+AAKGG LNG FV+ATPF                             +GFN
Sbjct: 939  MTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFN 998

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHG+EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDK+QVRSTG VDQ T+QPI      
Sbjct: 999  YHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKG 1058

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              +RFGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGS+LT++ VQ  K  +R++
Sbjct: 1059 GGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREI 1118

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
                  LPPG  K PK+VTC +CKTSKGMETVAMPYVF+YLAAELAAMNIKMTLQLS+GA
Sbjct: 1119 ----GGLPPG--KAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMTLQLSSGA 1172


>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1341

 Score =  429 bits (1102), Expect = e-117
 Identities = 214/304 (70%), Positives = 239/304 (78%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H +KAN+RFRHPRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 1045 HRRKANIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGNTGMRPDLIINPHAFP 1104

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFN 360
            SRMTIAMLLES+AAKGG+L+G F DATPF                           +GFN
Sbjct: 1105 SRMTIAMLLESVAAKGGSLHGKFKDATPFRSSVEPGSKSASLVDELGDMLKE----KGFN 1160

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            YHG EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDK+QVRSTG VDQ T+QPI      
Sbjct: 1161 YHGCEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQITRQPIKGRKRG 1220

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCS+CGS+L+TT ++ QK  +RD+
Sbjct: 1221 GGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSMLSTTFIEPQKRPVRDI 1280

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
              I         + P+KVTC +C+TSKGMETVAMPY+FRYLAAELAAMNIKMTL+LSNGA
Sbjct: 1281 PGIPVR------RAPRKVTCHACQTSKGMETVAMPYIFRYLAAELAAMNIKMTLKLSNGA 1334

Query: 901  GA*D 912
               D
Sbjct: 1335 NVSD 1338


>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1117

 Score =  427 bits (1097), Expect = e-117
 Identities = 218/302 (72%), Positives = 239/302 (79%), Gaps = 2/302 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QK N+RFRHPRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFP
Sbjct: 823  HLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFP 882

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPF--XXXXXXXXXXXXXXXXXXXXXXXXXXXRG 354
            SRMTIAMLLES+AAKGG+LNGNFVDATPF                             +G
Sbjct: 883  SRMTIAMLLESLAAKGGSLNGNFVDATPFASTVRASNAGEAKSEPESLVDELGKMLKSKG 942

Query: 355  FNYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXX 534
            FN+HGVEVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ T+QPI    
Sbjct: 943  FNHHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQPIKGRK 1002

Query: 535  XXXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIR 714
                +RFGEMERDS+LAHGAAYLLHDRLHT SD+HIADVCS+CGSILTT   Q Q+  +R
Sbjct: 1003 RGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSILTTH-YQPQRRIVR 1061

Query: 715  DMINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSN 894
            D+      LPP   K PKKV C +C+TSKG+ETVAMPYVFRYLAAELAAMNIKMTL L++
Sbjct: 1062 DI----GGLPP--VKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNIKMTLHLND 1115

Query: 895  GA 900
            GA
Sbjct: 1116 GA 1117


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score =  427 bits (1097), Expect = e-117
 Identities = 216/302 (71%), Positives = 241/302 (79%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QKAN+RFR  RNPVIGDKFSSRHGQKGVCSQLW D DMPFS  TGMRPDLIINPHAFP
Sbjct: 892  HLQKANIRFRRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFP 951

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFN 360
            SRMTIAMLLESIAAKGGAL+G FVDATPF                            GFN
Sbjct: 952  SRMTIAMLLESIAAKGGALHGKFVDATPFSNTMKESESESSSLVDDLGSMLAVC---GFN 1008

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            +HG EVLYSGVYGTELTC IF+GPVYYQRLRHMVSDKFQVRSTG+VD  T+QPI      
Sbjct: 1009 HHGTEVLYSGVYGTELTCRIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRG 1068

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              VRFGEMERDSLLAHGA+YLLHDRLHTSSDHHIADVCS CGS+LT++++Q  K  ++ +
Sbjct: 1069 GGVRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQAI 1128

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
            +   K LP   +++PKKVTCV+C++SKGMETVAMPYVF+YLAAELAAMNIKMTL+LSN A
Sbjct: 1129 L---KQLP---AREPKKVTCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEA 1182

Query: 901  GA 906
            GA
Sbjct: 1183 GA 1184


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score =  426 bits (1096), Expect = e-117
 Identities = 217/302 (71%), Positives = 241/302 (79%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H+QKAN+RFR  RNPVIGDKFSSRHGQKGVCSQLW D DMPFS  TGMRPDLIINPHAFP
Sbjct: 887  HLQKANIRFRRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFP 946

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXXRGFN 360
            SRMTIAMLLESIAAKGGAL+G FVDATPF                            GFN
Sbjct: 947  SRMTIAMLLESIAAKGGALHGKFVDATPFSNTMKESESESSSLVDDLGSMLAVC---GFN 1003

Query: 361  YHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXXX 540
            +HG EVLYSGVYGTELTC IF+GPVYYQRLRHMVSDKFQVRSTG+VD  T+QPI      
Sbjct: 1004 HHGTEVLYSGVYGTELTCLIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRG 1063

Query: 541  XXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRDM 720
              VRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCS CGS+LT++++Q  K  ++ +
Sbjct: 1064 GGVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQVI 1123

Query: 721  INIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNGA 900
            +   K LP   +++PKKVTCV+C++SKGMETVAMPYVF+YLAAELAAMNIKMTL+LSN A
Sbjct: 1124 L---KQLP---AREPKKVTCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEA 1177

Query: 901  GA 906
            GA
Sbjct: 1178 GA 1179


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score =  423 bits (1088), Expect = e-116
 Identities = 215/306 (70%), Positives = 238/306 (77%), Gaps = 1/306 (0%)
 Frame = +1

Query: 1    HIQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFP 180
            H QKAN+RFRH RNP+IGDKFSSRHGQKGVCSQLW D DMPF+G TGMRPDLIINPHAFP
Sbjct: 867  HPQKANIRFRHARNPIIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFP 926

Query: 181  SRMTIAMLLESIAAKGGALNGNFVDATPFXXXXXXXXXXXXXXXXXXXXXXXXXXX-RGF 357
            SRMTIAMLLESIAAKGG+L+G FVDATPF                            +GF
Sbjct: 927  SRMTIAMLLESIAAKGGSLHGKFVDATPFRNAVINANGEKKRKSSLLVDDLGSMLKEKGF 986

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NY+G E LYSG+ G EL CEIFMGPVYYQRLRHMVSDKFQVRSTG+VDQ T QPI     
Sbjct: 987  NYYGTEKLYSGILGVELECEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKR 1046

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGA+YLLHDRLHTSSDHHIADVCSLCGS+LT+++   Q+   + 
Sbjct: 1047 GGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSIANVQQ---KK 1103

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
            +I +   LPPG  + PKKVTC SCKTSKGMETVAMPYVFRYLAAELA+MNIKMTL+LS+ 
Sbjct: 1104 LIQVTGKLPPG--RTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMTLKLSDR 1161

Query: 898  AGA*DL 915
             G  DL
Sbjct: 1162 EGDEDL 1167


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score =  421 bits (1081), Expect = e-115
 Identities = 215/303 (70%), Positives = 235/303 (77%), Gaps = 2/303 (0%)
 Frame = +1

Query: 4    IQKANVRFRHPRNPVIGDKFSSRHGQKGVCSQLWQDTDMPFSGATGMRPDLIINPHAFPS 183
            +QK N+RFRHPRNP+IGDKFSSRHGQKGVCSQLW D DMPFSG TGMRPDLIINPHAFPS
Sbjct: 876  LQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPS 935

Query: 184  RMTIAMLLESIAAKGGALNGNFVDATPF--XXXXXXXXXXXXXXXXXXXXXXXXXXXRGF 357
            RMTIAMLLES+AAKGG+L+G +VDATPF                             +GF
Sbjct: 936  RMTIAMLLESVAAKGGSLHGKYVDATPFANSEKKVKEETNGEKSKTLVDELGEMLKVKGF 995

Query: 358  NYHGVEVLYSGVYGTELTCEIFMGPVYYQRLRHMVSDKFQVRSTGRVDQTTKQPIXXXXX 537
            NY+G EVLYSGVYGTELTCEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ T+QPI     
Sbjct: 996  NYNGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKR 1055

Query: 538  XXXVRFGEMERDSLLAHGAAYLLHDRLHTSSDHHIADVCSLCGSILTTTLVQSQKTDIRD 717
               +RFGEMERDSLLAHGAAYLLHDRLHT SD+HIADVCSLCGSILTT+ VQ        
Sbjct: 1056 GGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSSVQPPV----- 1110

Query: 718  MINIKKNLPPGSSKDPKKVTCVSCKTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNG 897
             +     +PP   + PKKVTC +CKTSKGMETVAMPYVFRYLAAELAAMNIK+ LQLSN 
Sbjct: 1111 RVCEIPGMPP--MRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKLNLQLSNA 1168

Query: 898  AGA 906
            +GA
Sbjct: 1169 SGA 1171