BLASTX nr result

ID: Mentha26_contig00028669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00028669
         (307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU30880.1| hypothetical protein MIMGU_mgv1a007559mg [Mimulus...    75   1e-11
ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266...    70   3e-10
ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    70   3e-10
ref|XP_003544972.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    67   3e-09
ref|XP_007141944.1| hypothetical protein PHAVU_008G239200g [Phas...    67   3e-09
ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    66   4e-09
ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protei...    66   4e-09
ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Popu...    66   4e-09
gb|EXB86775.1| hypothetical protein L484_007800 [Morus notabilis]      66   6e-09
ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    65   1e-08
emb|CBI28632.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_003631852.1| PREDICTED: uncharacterized protein LOC100267...    65   1e-08
ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267...    65   1e-08
ref|XP_006829603.1| hypothetical protein AMTR_s00122p00011550 [A...    64   3e-08
ref|XP_002439377.1| hypothetical protein SORBIDRAFT_09g005440 [S...    63   5e-08
ref|XP_004960838.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    62   6e-08
ref|XP_004960836.1| PREDICTED: pre-mRNA-splicing factor 38B-like...    62   6e-08
ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago trunc...    62   6e-08
ref|XP_002528504.1| protein with unknown function [Ricinus commu...    62   6e-08
ref|XP_004299788.1| PREDICTED: uncharacterized protein LOC101313...    62   1e-07

>gb|EYU30880.1| hypothetical protein MIMGU_mgv1a007559mg [Mimulus guttatus]
          Length = 403

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 41/73 (56%), Positives = 48/73 (65%), Gaps = 9/73 (12%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTVNHSYDRDNESRQGQNS------DLPN---PGRERDRG 153
           VSFGQRAPHR  TR SSP+RRT   SYDRD  SR+  N+      DLP+     R+RDR 
Sbjct: 206 VSFGQRAPHRASTRGSSPVRRTSTPSYDRDENSRRSPNTRRSHSRDLPDRDYSDRDRDRD 265

Query: 152 KDGNSDRDRIRDR 114
           +D + DRDR RDR
Sbjct: 266 RDRDRDRDRDRDR 278


>ref|XP_004236682.1| PREDICTED: uncharacterized protein LOC101266210 [Solanum
           lycopersicum]
          Length = 444

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 10/74 (13%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-NHSYDRDNES--------RQGQNSDLPN-PGRERDR 156
           VSFGQRAPHR  TRDSSPIRRT+   SYD+D  +        R+ Q+ DL +    ERDR
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTIAPPSYDKDGANGSRRSPSMRRSQSRDLSDRENSERDR 265

Query: 155 GKDGNSDRDRIRDR 114
           G+D + DRDR RDR
Sbjct: 266 GRDRDRDRDRDRDR 279


>ref|XP_003519321.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Glycine max]
          Length = 428

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 7/72 (9%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-----NHSYD--RDNESRQGQNSDLPNPGRERDRGKD 147
           VSFGQRAPHR  TRDSSPIRRT+     N S D  R   +R+ Q+ + P+  RERDR + 
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTLPSHEKNGSDDIRRSPSNRRSQSREYPDRDRERDRSRS 265

Query: 146 GNSDRDRIRDRY 111
            + DR+R RDRY
Sbjct: 266 RDRDRERDRDRY 277


>ref|XP_003544972.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Glycine max]
          Length = 444

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 7/71 (9%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-----NHSYD--RDNESRQGQNSDLPNPGRERDRGKD 147
           VSFGQRAPHR  TRDSSPIRRT+     N S D  R   +R+ Q+ + P+  R+RDR + 
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTLPSHEKNGSDDIRRSPSNRRSQSREYPDRERDRDRDRS 265

Query: 146 GNSDRDRIRDR 114
            + DRDR RDR
Sbjct: 266 QSRDRDRERDR 276


>ref|XP_007141944.1| hypothetical protein PHAVU_008G239200g [Phaseolus vulgaris]
           gi|561015077|gb|ESW13938.1| hypothetical protein
           PHAVU_008G239200g [Phaseolus vulgaris]
          Length = 437

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 12/77 (15%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-----NHSYD-RDNESRQGQNSDLPNPGRE------R 162
           VSFGQRAPHR  TRDSSPIRRT+     N S D R + SR+ Q+ + P+  RE      R
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTLPSHERNGSDDIRRSPSRRSQSREYPDRDRERERSRSR 265

Query: 161 DRGKDGNSDRDRIRDRY 111
           DR +D + +RDR RDRY
Sbjct: 266 DRERDHDRERDRERDRY 282


>ref|XP_006346763.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Solanum tuberosum]
          Length = 430

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 10/74 (13%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-NHSYDRDNES--------RQGQNSDLPN-PGRERDR 156
           VSFGQRAPHR  TRDSSPIRRT+    YD+D  +        R+ Q+ DL +    ERDR
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTIAPPPYDKDGANGSRRSPSMRRSQSRDLSDRENSERDR 265

Query: 155 GKDGNSDRDRIRDR 114
           G+D + D++R RDR
Sbjct: 266 GRDRDRDKERTRDR 279


>ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
           gi|222848219|gb|EEE85766.1| pre-mRNA splicing factor
           PRP38 family protein [Populus trichocarpa]
          Length = 397

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-NHSYDRD--------NESRQGQNSDLPNPGRERDRG 153
           VSFGQRAPHR  TRDSSP+RRT+   SYDR         ++SR+  + +  +  R++DRG
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSDDPRSHRSQSREYSDKEYSDRDRDQDRG 265

Query: 152 KDGNSDRDRIRDR 114
           ++ + DRDR RDR
Sbjct: 266 RERDRDRDRERDR 278


>ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Populus trichocarpa]
           gi|118481208|gb|ABK92555.1| unknown [Populus
           trichocarpa] gi|550340532|gb|ERP61921.1| hypothetical
           protein POPTR_0004s07420g [Populus trichocarpa]
          Length = 427

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-NHSYDRD--------NESRQGQNSDLPNPGRERDRG 153
           VSFGQRAPHR  TRDSSP+RRT+   SYDR         ++SR+  + +  +  R++DRG
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPSYDRTSDDPRSHRSQSREYSDKEYSDRDRDQDRG 265

Query: 152 KDGNSDRDRIRDR 114
           ++ + DRDR RDR
Sbjct: 266 RERDRDRDRERDR 278


>gb|EXB86775.1| hypothetical protein L484_007800 [Morus notabilis]
          Length = 377

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 13/77 (16%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV------NHSYDR----DNESRQGQN---SDLPNPGRE 165
           VSFGQRAPHR  TRDSSP+RR +        S+DR    D  SR+ Q+   SD   P R+
Sbjct: 132 VSFGQRAPHRASTRDSSPVRRNLPPPPPPPPSHDRSSSDDLRSRRSQSREYSDREYPERD 191

Query: 164 RDRGKDGNSDRDRIRDR 114
           R+R +DG+ DRDR RDR
Sbjct: 192 RERERDGDRDRDRNRDR 208


>ref|XP_004490796.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Cicer arietinum]
          Length = 434

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRT---------VNHSYDRDNESRQGQNSDLPNPGRERDRG 153
           VSFGQRAPHR  TRDSSPIRRT         V+    +   +R+ Q+ + P+  RER R 
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTLAPPPHEKNVSDDIRKSPSNRRSQSREYPDRDRERSRS 265

Query: 152 KDGNSDRDRIRDR 114
           +D   +RDR RDR
Sbjct: 266 RDRERERDRERDR 278


>emb|CBI28632.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 16/80 (20%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV---NHSYDRDN--------ESRQGQNSDLPNP----- 174
           VSFGQRAPHR  TRDSSP+RRT+     SYDR++         SR+ Q+ +L        
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDDLRRSPSSRRSQSRELDKDRDRAM 265

Query: 173 GRERDRGKDGNSDRDRIRDR 114
            R+RDR KD + DRDR RDR
Sbjct: 266 DRDRDRDKDRDRDRDRDRDR 285


>ref|XP_003631852.1| PREDICTED: uncharacterized protein LOC100267328 isoform 3 [Vitis
           vinifera]
          Length = 399

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 12/76 (15%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV---NHSYDRDN--------ESRQGQNSDL-PNPGRER 162
           VSFGQRAPHR  TRDSSP+RRT+     SYDR++         SR+ Q+ +L  +  R+R
Sbjct: 198 VSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDDLRRSPSSRRSQSRELDKDRDRDR 257

Query: 161 DRGKDGNSDRDRIRDR 114
           DR +D + D+DR RDR
Sbjct: 258 DRDRDRDKDKDRDRDR 273


>ref|XP_003631851.1| PREDICTED: uncharacterized protein LOC100267328 isoform 2 [Vitis
           vinifera]
          Length = 407

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 12/76 (15%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV---NHSYDRDN--------ESRQGQNSDL-PNPGRER 162
           VSFGQRAPHR  TRDSSP+RRT+     SYDR++         SR+ Q+ +L  +  R+R
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPPPSYDRNSSDDLRRSPSSRRSQSRELDKDRDRDR 265

Query: 161 DRGKDGNSDRDRIRDR 114
           DR +D + D+DR RDR
Sbjct: 266 DRDRDRDKDKDRDRDR 281


>ref|XP_006829603.1| hypothetical protein AMTR_s00122p00011550 [Amborella trichopoda]
           gi|548835114|gb|ERM97019.1| hypothetical protein
           AMTR_s00122p00011550 [Amborella trichopoda]
          Length = 416

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 24/88 (27%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV-----NHSYDRDNESRQGQNS---------------- 189
           VSFGQRAPHR  TRDSSP+RRT+      +  DRD + R G +                 
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPRDRNESDRDRDRRHGNDDRDNRDLYKSRHLERES 265

Query: 188 ---DLPNPGRERDRGKDGNSDRDRIRDR 114
              D     R++DR +D   DRDRIRDR
Sbjct: 266 DRRDYERTSRDQDRDRDRERDRDRIRDR 293


>ref|XP_002439377.1| hypothetical protein SORBIDRAFT_09g005440 [Sorghum bicolor]
           gi|241944662|gb|EES17807.1| hypothetical protein
           SORBIDRAFT_09g005440 [Sorghum bicolor]
          Length = 419

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTVNHSYDRDNESRQGQNSDLPNPGRER-DRGKDGNS-DR 132
           VSFGQRAPHR  TRDSSP+RRTV H   R + S   ++     P R+R DR  D +S DR
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTVTHDDHRRSYSPSHRSGSREGPDRDRSDRELDRSSRDR 265

Query: 131 DRIRDR 114
           DR +DR
Sbjct: 266 DRDQDR 271


>ref|XP_004960838.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X3 [Setaria
           italica]
          Length = 335

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTVNH-------SYDRDNESRQGQNSDLPNPGRERD---R 156
           VSFGQRAPHR  TRDSSP+RRT+ H       S  R + SR+G + +L    R+RD   R
Sbjct: 132 VSFGQRAPHRASTRDSSPVRRTITHDDPRRLYSPSRRSGSREGPDRELDRSSRDRDHSSR 191

Query: 155 GKDGNS-DRDRIRD 117
            +D +S D+DR RD
Sbjct: 192 DRDRSSRDQDRDRD 205


>ref|XP_004960836.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Setaria
           italica] gi|514745261|ref|XP_004960837.1| PREDICTED:
           pre-mRNA-splicing factor 38B-like isoform X2 [Setaria
           italica]
          Length = 409

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTVNH-------SYDRDNESRQGQNSDLPNPGRERD---R 156
           VSFGQRAPHR  TRDSSP+RRT+ H       S  R + SR+G + +L    R+RD   R
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTITHDDPRRLYSPSRRSGSREGPDRELDRSSRDRDHSSR 265

Query: 155 GKDGNS-DRDRIRD 117
            +D +S D+DR RD
Sbjct: 266 DRDRSSRDQDRDRD 279


>ref|XP_003616194.1| Pre-mRNA-splicing factor 38B [Medicago truncatula]
           gi|355517529|gb|AES99152.1| Pre-mRNA-splicing factor 38B
           [Medicago truncatula]
          Length = 433

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 12/78 (15%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTVNHSYD--------RDNESRQGQNSDLPNPGRERDRG- 153
           VSFGQRAPHR  TRDSSPIRRTV   ++        R   + + Q+ + P   R+R+R  
Sbjct: 206 VSFGQRAPHRASTRDSSPIRRTVPAPHEKNGTDDIRRSPSNHRSQSREYPERDRDRERSR 265

Query: 152 ---KDGNSDRDRIRDRYW 108
              +D   DR+R RDRY+
Sbjct: 266 SRDRDRERDRERDRDRYY 283


>ref|XP_002528504.1| protein with unknown function [Ricinus communis]
           gi|223532064|gb|EEF33873.1| protein with unknown
           function [Ricinus communis]
          Length = 418

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 13/77 (16%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV---NHSYDRDNE-------SRQGQN---SDLPNPGRE 165
           VSFGQRAPHR  TRDSSP+RRT+     SY+R+++       SR+ Q+   SD     R+
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTIPPPPSSYERNSDDPRRSPRSRRSQSREYSDKEYSDRD 265

Query: 164 RDRGKDGNSDRDRIRDR 114
           RDR +D + +R+R RDR
Sbjct: 266 RDRDRDQDRNRERERDR 282


>ref|XP_004299788.1| PREDICTED: uncharacterized protein LOC101313313 [Fragaria vesca
           subsp. vesca]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
 Frame = -3

Query: 305 VSFGQRAPHRTLTRDSSPIRRTV------NHSYDRDNESRQGQNSDLPNPG-RERDRGKD 147
           VSFGQRAPHR  TRDSSP+RRT+        +   D  SR+ Q+ D  +    +RDRG+D
Sbjct: 206 VSFGQRAPHRASTRDSSPVRRTLPPPPPYEKTSTDDLHSRRSQSRDYSDRDYSDRDRGRD 265

Query: 146 GNSDRDRIRDR 114
            + DRDR R+R
Sbjct: 266 RDRDRDRNRER 276


Top