BLASTX nr result
ID: Mentha26_contig00028374
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00028374
(576 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr... 215 8e-54
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla... 214 1e-53
gb|EYU34724.1| hypothetical protein MIMGU_mgv1a011756mg [Mimulus... 211 1e-52
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c... 210 2e-52
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu... 209 5e-52
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla... 208 9e-52
ref|XP_007215803.1| hypothetical protein PRUPE_ppa009947mg [Prun... 207 2e-51
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla... 206 4e-51
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu... 206 5e-51
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan... 206 5e-51
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis] 204 1e-50
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla... 204 2e-50
gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana] 202 7e-50
gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana] 201 1e-49
ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana] g... 201 1e-49
ref|XP_007031502.1| Polypeptide deformylase, putative isoform 5 ... 201 1e-49
ref|XP_007031498.1| Polypeptide deformylase, putative isoform 1 ... 201 1e-49
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps... 200 2e-49
pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Stru... 199 3e-49
ref|XP_004491728.1| PREDICTED: peptide deformylase 1B, chloropla... 198 1e-48
>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
gi|567908433|ref|XP_006446530.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|567908435|ref|XP_006446531.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549140|gb|ESR59769.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549141|gb|ESR59770.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549142|gb|ESR59771.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
Length = 274
Score = 215 bits (547), Expect = 8e-54
Identities = 102/154 (66%), Positives = 124/154 (80%)
Frame = -2
Query: 464 YSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRT 285
Y E+ AS DLRFE PL+I++YPDP LRAKNKR+++FD +LKKLVDEMFDVMY+T
Sbjct: 61 YGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVDEMFDVMYKT 120
Query: 284 NGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHG 105
+GIGL+APQVGINVQL+VFNP GERG GEE VLVNP + S K +P++E CLS PG+H
Sbjct: 121 DGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIHA 180
Query: 104 SVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
VERP+SV++DA+DING RF SL+ PARVFQH
Sbjct: 181 DVERPESVKIDARDINGARFSVSLSDLPARVFQH 214
>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
[Citrus sinensis] gi|568832146|ref|XP_006470304.1|
PREDICTED: peptide deformylase 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
deformylase 1B, chloroplastic-like isoform X3 [Citrus
sinensis]
Length = 282
Score = 214 bits (545), Expect = 1e-53
Identities = 101/154 (65%), Positives = 124/154 (80%)
Frame = -2
Query: 464 YSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRT 285
Y E+ AS DLRFE PL+I++YPDP LRAKNKR+++FD++LKKLVDEMFD MY+T
Sbjct: 69 YGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDFMYKT 128
Query: 284 NGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHG 105
+GIGL+APQVGINVQL+VFNP GERG GEE VLVNP + S K +P++E CLS PG+H
Sbjct: 129 DGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIHA 188
Query: 104 SVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
VERP+SV++DA+DING RF SL+ PARVFQH
Sbjct: 189 DVERPESVKIDARDINGARFSVSLSDLPARVFQH 222
>gb|EYU34724.1| hypothetical protein MIMGU_mgv1a011756mg [Mimulus guttatus]
Length = 271
Score = 211 bits (536), Expect = 1e-52
Identities = 100/155 (64%), Positives = 127/155 (81%)
Frame = -2
Query: 467 AYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYR 288
A + + AS DL+FE PL+I++YPDP+LRAKNKRV++FDE+LKKLVDEMFDVMY+
Sbjct: 57 AQARRSFSSAVASPSDLQFEGPLKIIEYPDPKLRAKNKRVDTFDETLKKLVDEMFDVMYK 116
Query: 287 TNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLH 108
+G+GL+APQVG+NVQ++VFNPAGERG GEE VLVNP + S + VPF E CLS PG++
Sbjct: 117 DDGVGLSAPQVGMNVQVMVFNPAGERGEGEEIVLVNPRINRYSRQIVPFDEGCLSFPGVY 176
Query: 107 GSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
VERP+S+ V+AQDING +FE +LTGFPAR+FQH
Sbjct: 177 ADVERPNSLVVEAQDINGAKFEVNLTGFPARIFQH 211
>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
gi|223539350|gb|EEF40941.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 282
Score = 210 bits (534), Expect = 2e-52
Identities = 99/148 (66%), Positives = 123/148 (83%)
Frame = -2
Query: 446 EEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGIGLA 267
EE+ A+ DL FEEPL+I++YPDP LR KNKR+++FD++LKKLVDEMFDVMY+T+GIGL+
Sbjct: 75 EEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLS 134
Query: 266 APQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVERPD 87
APQVGINVQL+VFNP GERG GEE VL+NP + S K VPF E CLS PG++ V RP+
Sbjct: 135 APQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPE 194
Query: 86 SVEVDAQDINGERFECSLTGFPARVFQH 3
SV++DA+DING RF +L+G PARVFQH
Sbjct: 195 SVKIDARDINGARFTVNLSGLPARVFQH 222
>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|566152890|ref|XP_006369926.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|566152892|ref|XP_006369927.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348928|gb|EEE84852.2| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348929|gb|ERP66495.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348930|gb|ERP66496.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 268
Score = 209 bits (531), Expect = 5e-52
Identities = 106/179 (59%), Positives = 133/179 (74%)
Frame = -2
Query: 539 AALSPPLNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAK 360
A S + Q PPS S R + ++Q A+ DL FE PL+I++YPDP LRAK
Sbjct: 33 ARFSSTMKQPRPPSLFVRSQAKRGPFLK---QDQVAATSDLEFEAPLKIVEYPDPILRAK 89
Query: 359 NKRVNSFDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVN 180
NKR++SFD++LKKLVDEMFDVMY+T+GIGL+APQVGINVQL+VFNPA E G G+E VLVN
Sbjct: 90 NKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVN 149
Query: 179 PHMKGDSGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
P + S KTV F E CLS PG++ V+RP+SV++DA+DING RF +L+G PARVFQH
Sbjct: 150 PRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQH 208
>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
tuberosum]
Length = 279
Score = 208 bits (529), Expect = 9e-52
Identities = 102/160 (63%), Positives = 124/160 (77%)
Frame = -2
Query: 482 AVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMF 303
A R SS ++ A+ DL FE PL+I++YPDP LRAKNKR+ FD +LKKLVDEMF
Sbjct: 60 AQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNKRIGKFDANLKKLVDEMF 119
Query: 302 DVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLS 123
D+MY+T+GIGL+APQVG+NVQL+VFN AGERG GEE VLVNP + S + +P++E CLS
Sbjct: 120 DIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLS 179
Query: 122 LPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
P +HG VERPDSV+V AQDING RFE SL+ PARVFQH
Sbjct: 180 FPMIHGDVERPDSVKVGAQDINGARFEISLSALPARVFQH 219
>ref|XP_007215803.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
gi|462411953|gb|EMJ17002.1| hypothetical protein
PRUPE_ppa009947mg [Prunus persica]
Length = 271
Score = 207 bits (526), Expect = 2e-51
Identities = 98/148 (66%), Positives = 122/148 (82%)
Frame = -2
Query: 446 EEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGIGLA 267
E++ A+ D+ FE PL+I++YPDP LRAKNKR++SFDE+LK LVDEMFD+MY+T+GIGL+
Sbjct: 64 EDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVDEMFDIMYKTDGIGLS 123
Query: 266 APQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVERPD 87
APQVGINVQL+VFNP GERG GEE VLVNP + S KT PF E CLS PG++ V RP+
Sbjct: 124 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRPFNEGCLSFPGIYADVVRPE 183
Query: 86 SVEVDAQDINGERFECSLTGFPARVFQH 3
SV++DA+DING RF +L+G PARVFQH
Sbjct: 184 SVKIDARDINGARFTVNLSGLPARVFQH 211
>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 275
Score = 206 bits (524), Expect = 4e-51
Identities = 98/148 (66%), Positives = 123/148 (83%)
Frame = -2
Query: 446 EEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGIGLA 267
E+Q AS D+ FE PLEI++YPDP LRAKNKR+++FD++LKKLV+EMFD+MYRT+GIGL+
Sbjct: 66 EDQVASAADVEFETPLEIVEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMYRTDGIGLS 125
Query: 266 APQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVERPD 87
APQVGINVQL+VFNP GERG GEE VLVNP + S KT F E CLS PG++ V+RP+
Sbjct: 126 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVSRYSQKTRLFNEGCLSFPGIYADVQRPE 185
Query: 86 SVEVDAQDINGERFECSLTGFPARVFQH 3
SV++DA+DI+G RF +L+G PARVFQH
Sbjct: 186 SVKIDARDISGARFTVNLSGLPARVFQH 213
>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|550348931|gb|ERP66497.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 269
Score = 206 bits (523), Expect = 5e-51
Identities = 105/179 (58%), Positives = 133/179 (74%)
Frame = -2
Query: 539 AALSPPLNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAK 360
A S + Q PPS S R + + ++ A+ DL FE PL+I++YPDP LRAK
Sbjct: 33 ARFSSTMKQPRPPSLFVRSQAKRGPF--LKQDQVAATTGDLEFEAPLKIVEYPDPILRAK 90
Query: 359 NKRVNSFDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVN 180
NKR++SFD++LKKLVDEMFDVMY+T+GIGL+APQVGINVQL+VFNPA E G G+E VLVN
Sbjct: 91 NKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVN 150
Query: 179 PHMKGDSGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
P + S KTV F E CLS PG++ V+RP+SV++DA+DING RF +L+G PARVFQH
Sbjct: 151 PRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQH 209
>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
Full=Peptide deformylase 1B, chloroplastic; Short=PDF
1B; AltName: Full=Polypeptide deformylase; Flags:
Precursor gi|11320950|gb|AAG33972.1| peptide
deformylase-like protein [Solanum lycopersicum]
Length = 279
Score = 206 bits (523), Expect = 5e-51
Identities = 100/160 (62%), Positives = 126/160 (78%)
Frame = -2
Query: 482 AVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMF 303
A R SS ++ A+ DL F PL+I++YPDP LRAKNKR+++FD +LKKLVDEMF
Sbjct: 60 AQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMF 119
Query: 302 DVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLS 123
D+MY+T+GIGL+APQVG+NVQL+VFN AGERG GEE VLVNP + S + +P++E CLS
Sbjct: 120 DIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLS 179
Query: 122 LPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
P +HG V+RP+SV+VDAQDING RFE SL+ PARVFQH
Sbjct: 180 FPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQH 219
>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
Length = 266
Score = 204 bits (520), Expect = 1e-50
Identities = 99/159 (62%), Positives = 125/159 (78%)
Frame = -2
Query: 479 VVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFD 300
V + S E++ AS DL+FE PL+I+ YPDP LRAKNKR++SFD++LKKLV EMFD
Sbjct: 10 VAQARRGSSLKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLKKLVHEMFD 69
Query: 299 VMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSL 120
VMY+T+GIGL+APQVG+NVQL+V NPAGERG GEE VLVNP + S K V F E CLS
Sbjct: 70 VMYKTDGIGLSAPQVGMNVQLMVLNPAGERGVGEEIVLVNPRVSRYSKKMVLFNEGCLSF 129
Query: 119 PGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
PG++ V+RP+SV++DA+D+NG RF +L+G PARVFQH
Sbjct: 130 PGIYADVQRPESVKIDARDVNGARFTVNLSGLPARVFQH 168
>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
gi|296087647|emb|CBI34903.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 204 bits (518), Expect = 2e-50
Identities = 99/148 (66%), Positives = 120/148 (81%)
Frame = -2
Query: 446 EEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGIGLA 267
EE AS DL FE PL+I++YPDP LRAKNK +++FD++LKKLVDEMFDVMY+T+GIGL+
Sbjct: 68 EEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYKTDGIGLS 127
Query: 266 APQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVERPD 87
APQVGINVQL+VFNP GERG GEE VLVNP + S K V F E CLS PG++ VERP+
Sbjct: 128 APQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIYADVERPE 187
Query: 86 SVEVDAQDINGERFECSLTGFPARVFQH 3
SV++DA+DI G RF +L+G PARVFQH
Sbjct: 188 SVKIDARDITGARFMINLSGLPARVFQH 215
>gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis thaliana]
Length = 273
Score = 202 bits (513), Expect = 7e-50
Identities = 100/173 (57%), Positives = 132/173 (76%)
Frame = -2
Query: 521 LNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNS 342
+N+++P + + V RV+ +++ AS D++FE PL+I++YPDP LRAKNKR++
Sbjct: 45 VNRTSPLTSSVRAEVKRVSRK----DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDI 100
Query: 341 FDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGD 162
FDE+LK LVD MFDVMY+T+GIGL+APQVG+NVQL+VFNPAGE G G+E VLVNP +K
Sbjct: 101 FDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY 160
Query: 161 SGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
S K VPF E CLS PG++ V RP SV++DA+DI GERF SL+ PAR+FQH
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSSLPARIFQH 213
>gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
Length = 273
Score = 201 bits (511), Expect = 1e-49
Identities = 100/173 (57%), Positives = 132/173 (76%)
Frame = -2
Query: 521 LNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNS 342
+N+++P + + V RV+ +++ AS D++FE PL+I++YPDP LRAKNKR++
Sbjct: 45 VNRNSPLTSSVRAEVKRVSRK----DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDI 100
Query: 341 FDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGD 162
FDE+LK LVD MFDVMY+T+GIGL+APQVG+NVQL+VFNPAGE G G+E VLVNP +K
Sbjct: 101 FDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY 160
Query: 161 SGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
S K VPF E CLS PG++ V RP SV++DA+DI GERF SL+ PAR+FQH
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQH 213
>ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
gi|30684999|ref|NP_850821.1| peptide deformylase 1B
[Arabidopsis thaliana]
gi|39932734|sp|Q9FUZ2.2|DEF1B_ARATH RecName:
Full=Peptide deformylase 1B,
chloroplastic/mitochondrial; Short=AtDEF2;
Short=AtPDF1B; Short=PDF 1B; AltName: Full=Polypeptide
deformylase; Flags: Precursor gi|7573315|emb|CAB87633.1|
putative protein [Arabidopsis thaliana]
gi|15292891|gb|AAK92816.1| unknown protein [Arabidopsis
thaliana] gi|20465677|gb|AAM20307.1| unknown protein
[Arabidopsis thaliana] gi|332004676|gb|AED92059.1|
peptide deformylase 1B [Arabidopsis thaliana]
gi|332004677|gb|AED92060.1| peptide deformylase 1B
[Arabidopsis thaliana]
Length = 273
Score = 201 bits (511), Expect = 1e-49
Identities = 100/173 (57%), Positives = 132/173 (76%)
Frame = -2
Query: 521 LNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNS 342
+N+++P + + V RV+ +++ AS D++FE PL+I++YPDP LRAKNKR++
Sbjct: 45 VNRTSPLTSSVRAEVKRVSRK----DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDI 100
Query: 341 FDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGD 162
FDE+LK LVD MFDVMY+T+GIGL+APQVG+NVQL+VFNPAGE G G+E VLVNP +K
Sbjct: 101 FDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKY 160
Query: 161 SGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
S K VPF E CLS PG++ V RP SV++DA+DI GERF SL+ PAR+FQH
Sbjct: 161 SDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPARIFQH 213
>ref|XP_007031502.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
gi|508710531|gb|EOY02428.1| Polypeptide deformylase,
putative isoform 5 [Theobroma cacao]
Length = 279
Score = 201 bits (510), Expect = 1e-49
Identities = 92/151 (60%), Positives = 124/151 (82%)
Frame = -2
Query: 455 MALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGI 276
++ +++ AS DLRF+ PL+I++YPDP LR +NKR+++FDE+LKKLVDEMFDVMY+T+GI
Sbjct: 68 LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMFDVMYKTDGI 127
Query: 275 GLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVE 96
GL+APQVG+NVQL+VFNP GERG G+E VLVNP + S KTV F E CLS P ++ VE
Sbjct: 128 GLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLSFPRIYADVE 187
Query: 95 RPDSVEVDAQDINGERFECSLTGFPARVFQH 3
RP+S+++DA+D+NG RF +L+G AR+FQH
Sbjct: 188 RPESIKIDARDVNGARFTVNLSGLRARIFQH 218
>ref|XP_007031498.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
gi|590645993|ref|XP_007031499.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|590645997|ref|XP_007031500.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|590646000|ref|XP_007031501.1| Polypeptide
deformylase, putative isoform 1 [Theobroma cacao]
gi|508710527|gb|EOY02424.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
Length = 278
Score = 201 bits (510), Expect = 1e-49
Identities = 92/151 (60%), Positives = 124/151 (82%)
Frame = -2
Query: 455 MALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGI 276
++ +++ AS DLRF+ PL+I++YPDP LR +NKR+++FDE+LKKLVDEMFDVMY+T+GI
Sbjct: 68 LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMFDVMYKTDGI 127
Query: 275 GLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVE 96
GL+APQVG+NVQL+VFNP GERG G+E VLVNP + S KTV F E CLS P ++ VE
Sbjct: 128 GLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLSFPRIYADVE 187
Query: 95 RPDSVEVDAQDINGERFECSLTGFPARVFQH 3
RP+S+++DA+D+NG RF +L+G AR+FQH
Sbjct: 188 RPESIKIDARDVNGARFTVNLSGLRARIFQH 218
>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
gi|482557139|gb|EOA21331.1| hypothetical protein
CARUB_v10001691mg [Capsella rubella]
Length = 273
Score = 200 bits (509), Expect = 2e-49
Identities = 102/176 (57%), Positives = 128/176 (72%)
Frame = -2
Query: 530 SPPLNQSAPPS*GSESAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKR 351
S +N+S P + +AV RV E++ AS DL FE PL+I++YPDP LRAKNKR
Sbjct: 42 SSAVNRSTPLTSPVRAAVKRVPRK----EDEVASASDLEFETPLKIVEYPDPILRAKNKR 97
Query: 350 VNSFDESLKKLVDEMFDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHM 171
+ FDE+LK LVD MFD+MY+T+GIGL+APQVG+NVQL+VFNPAGE G GEE VLVNP +
Sbjct: 98 IGVFDENLKNLVDAMFDIMYKTDGIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPKI 157
Query: 170 KGDSGKTVPFKEACLSLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
S K VPF E CLS PG++ V RP SV++DA+DI G +F SL+ PAR+FQH
Sbjct: 158 NKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGAKFSISLSRLPARIFQH 213
>pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal Structure
Length = 193
Score = 199 bits (507), Expect = 3e-49
Identities = 95/148 (64%), Positives = 120/148 (81%)
Frame = -2
Query: 446 EEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEMFDVMYRTNGIGLA 267
+++ AS D++FE PL+I++YPDP LRAKNKR++ FDE+LK LVD MFDVMY+T+GIGL+
Sbjct: 2 DDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLS 61
Query: 266 APQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACLSLPGLHGSVERPD 87
APQVG+NVQL+VFNPAGE G G+E VLVNP +K S K VPF E CLS PG++ V RP
Sbjct: 62 APQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQ 121
Query: 86 SVEVDAQDINGERFECSLTGFPARVFQH 3
SV++DA+DI GERF SL+ PAR+FQH
Sbjct: 122 SVKIDARDITGERFSISLSRLPARIFQH 149
>ref|XP_004491728.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cicer
arietinum]
Length = 258
Score = 198 bits (503), Expect = 1e-48
Identities = 93/161 (57%), Positives = 122/161 (75%)
Frame = -2
Query: 485 SAVVRVAYSSMALEEQFASQLDLRFEEPLEILKYPDPRLRAKNKRVNSFDESLKKLVDEM 306
S+ R S A + + AS D F+ PL+I++YP+P+LR KNKR+ +FD++L KLV EM
Sbjct: 38 SSTNRTKASFSAAQHELASPGDFEFDAPLKIVEYPNPKLRTKNKRIATFDDNLNKLVHEM 97
Query: 305 FDVMYRTNGIGLAAPQVGINVQLLVFNPAGERGWGEETVLVNPHMKGDSGKTVPFKEACL 126
FDVMY+T+GIGL+APQVG+NVQL+VFNP GERG GEE VL+NP + S F E CL
Sbjct: 98 FDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLINPRVSKYSMNRTLFNEGCL 157
Query: 125 SLPGLHGSVERPDSVEVDAQDINGERFECSLTGFPARVFQH 3
S PG+H V+RP+SV++DA+DING+RF SL+G PAR+FQH
Sbjct: 158 SFPGIHADVKRPESVKIDARDINGKRFSVSLSGLPARIFQH 198