BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00027951
         (1469 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus...   707   0.0  
ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synt...   654   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   653   0.0  
ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synt...   643   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              639   e-180
gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus no...   628   e-177
ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   627   e-177
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   624   e-176
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   620   e-175
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   618   e-174
ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prun...   616   e-174
ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synt...   612   e-172
ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synt...   612   e-172
ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citr...   609   e-171
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   608   e-171
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   604   e-170
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   603   e-170
ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, part...   590   e-166
ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phas...   588   e-165
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   585   e-164

>gb|EYU22643.1| hypothetical protein MIMGU_mgv1a002284mg [Mimulus guttatus]
          Length = 691

 Score =  707 bits (1824), Expect = 0.0
 Identities = 354/491 (72%), Positives = 408/491 (83%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCP-SEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPD 177
            RYSDFIVNEV +DGNVVHLT+L+ P SE A EKKEK  D +++D++ EIESFR L GD D
Sbjct: 28   RYSDFIVNEVDMDGNVVHLTSLEAPPSEAAGEKKEKVADQLEKDYASEIESFRTLVGDSD 87

Query: 178  VEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSK 357
             EKLK  IDQ+ SGV  N ES+VLSPSSDK+HRTA+HNFFKER+KFLVTDT+DGPDSSSK
Sbjct: 88   AEKLKFFIDQISSGVKTNDESIVLSPSSDKTHRTAVHNFFKERLKFLVTDTVDGPDSSSK 147

Query: 358  CIRVRLXXXXXXXXXXXXXXXXXXXXXP-YDSRGSDNWPENIGKFLRFHLYKENKDTQEA 534
            CIRVRL                       YDSRG+D+WP+N GKFLRF+LYKENKDTQEA
Sbjct: 148  CIRVRLNSGINNNARGNNSRKRKDRGQQQYDSRGTDSWPDNTGKFLRFYLYKENKDTQEA 207

Query: 535  LGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVN 714
            LG+L KM+G +PRSFGFAGTKDKRSVSTQRVTVFKQRAS+LAALN +L GIKVGNFC+V+
Sbjct: 208  LGILGKMIGVQPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNDRLFGIKVGNFCYVD 267

Query: 715  EGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIG 894
            E LVLG+LQGNRFTITLRS+ ++ EDII+A+ATALG NGFINYFGLQRFGSSSIPTHLIG
Sbjct: 268  EELVLGKLQGNRFTITLRSVSSDVEDIIRASATALGNNGFINYFGLQRFGSSSIPTHLIG 327

Query: 895  AALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            AALLRGEW+AAV+M+L+PREGEKD TR IREYYKESGDIEGT+RQLPRHLVAER+IL CF
Sbjct: 328  AALLRGEWKAAVSMILDPREGEKDVTRTIREYYKESGDIEGTLRQLPRHLVAERSILYCF 387

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            ++ PGNYLQALLAIPRTLRMM+VHSYQSYLWNHAASMRVQ YG HQVVLGDLVYC ++  
Sbjct: 388  QKNPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGMHQVVLGDLVYCKDQEI 447

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
             KE   S  ECE             +++SV+DLS+ +N  VKVIS+EDIAAG YTI+DI+
Sbjct: 448  EKETKFSNSECEDGNGNDTHDDCHVDELSVIDLSEARNTVVKVISEEDIAAGTYTIDDIV 507

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+++YP
Sbjct: 508  LPLPGSRITYP 518


>ref|XP_006347775.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            tuberosum]
          Length = 685

 Score =  654 bits (1687), Expect = 0.0
 Identities = 329/489 (67%), Positives = 389/489 (79%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDFIVNEV LD NVVHLT L+ P E +E K     D ++R +  EIESFR LAG+ D 
Sbjct: 28   RYSDFIVNEVDLDENVVHLTLLEAPKECSENKDVNISDQLNRSYVTEIESFRSLAGNSDA 87

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            +KLK  ID++ SG   + ES+VLSPSSDKSHRTAIHNFFKER+KFLVTDT+DG +  SKC
Sbjct: 88   DKLKAFIDELNSGADVSDESIVLSPSSDKSHRTAIHNFFKERLKFLVTDTIDGVEDQSKC 147

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            +RVRL                      YDSRGSD+WP ++GKFLRFHL+KENKDTQEAL 
Sbjct: 148  VRVRLNNDRNNGRGRSSRKRKDRDDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEALN 207

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            ++AKMLG + RSFGFAGTKDKR+VSTQRVTVFKQ+AS+LAALN++LIGIKVG+FCHV EG
Sbjct: 208  VIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKEG 267

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            L+LGQL GNRFTITLR + AE+EDIIKA+A ALGK+GFINYFGLQRFGSSS+PTHLIGAA
Sbjct: 268  LLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGAA 327

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW+AAV+++L+PREGEK+A   +REYYKESGDI+GT+RQLPR+LVAE+AILQC ++
Sbjct: 328  LLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDIDGTLRQLPRYLVAEKAILQCLKR 387

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSAK 1260
             PGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQ +GF QVVLGDLVY  EE   K
Sbjct: 388  SPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKEEYKVK 447

Query: 1261 EMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDIILP 1440
            E  S V ECE             ++IS  DL + +N  VKVI++ED+ +G Y I+D++LP
Sbjct: 448  E--SFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYAIDDVLLP 505

Query: 1441 LPGSKVSYP 1467
            LPGS+V YP
Sbjct: 506  LPGSRVIYP 514


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  653 bits (1685), Expect = 0.0
 Identities = 327/491 (66%), Positives = 382/491 (77%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RY DFIVNEV  DGNVVHLT+LD P E  E+ + K  D  ++ ++ EIE FR L GD DV
Sbjct: 28   RYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNETKISDQSNKGYASEIELFRSLVGDSDV 87

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E LK LIDQV SG+ +    +VLS SSDKSHRTA+HNFFKE +KFLVTDT+DGPD+SSKC
Sbjct: 88   ECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKC 147

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     P+DSRGSDNW E++GKFLRFHLYKENKDTQEA+G
Sbjct: 148  IRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            L+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQ A+RLAALN++LIGIKVG+FCHV EG
Sbjct: 208  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            LVLGQL GNRFTITLR ++A++E+ IKA+A ALG+ GFINYFGLQRFGS S+PTHLIGAA
Sbjct: 268  LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW+ AV+++L+PREGE+DA RK REYYKES DIEGT+RQ PRHLVAERAILQC ++
Sbjct: 328  LLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 387

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSAK 1260
             PGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQNYG  QVVLGDLVYC  +G   
Sbjct: 388  YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYC--KGDNA 445

Query: 1261 EMISSVLECEXXXXXXXXXXXXP--EDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
            E ++ V+  E               ++IS  DL + +N  VK +  ED+  G YTI+D++
Sbjct: 446  EKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVV 505

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+  YP
Sbjct: 506  LPLPGSRAIYP 516


>ref|XP_004230110.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Solanum
            lycopersicum]
          Length = 685

 Score =  643 bits (1659), Expect = 0.0
 Identities = 324/489 (66%), Positives = 386/489 (78%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDFIVNEV LD NVVHL +L+ P E +E K     D ++R +  EIESFR LAG+ D 
Sbjct: 28   RYSDFIVNEVDLDENVVHLNSLEAPKECSENKDVNISDQLNRSYVTEIESFRSLAGNSDA 87

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            +KLK  ID++ SG   + ES+VLSPSSDKSHRT IHNFFKER+KFLVTDT+DG +  SKC
Sbjct: 88   DKLKAFIDELNSGADVSDESIVLSPSSDKSHRTEIHNFFKERLKFLVTDTIDGVEDQSKC 147

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            +RVRL                      YDSRGSD+WP ++GKFLRFHL+KENKDTQEAL 
Sbjct: 148  VRVRLNNDRNNGRGRYSRKRKDRNDKRYDSRGSDSWPGHLGKFLRFHLFKENKDTQEALN 207

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            ++AKMLG + RSFGFAGTKDKR+VSTQRVTVFKQ+AS+LAALN++LIGIKVG+FCHV EG
Sbjct: 208  VIAKMLGVQLRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVGDFCHVKEG 267

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            L+LGQL GNRFTITLR + AE+EDIIKA+A ALGK+GFINYFGLQRFGSSS+PTHLIGAA
Sbjct: 268  LLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSVPTHLIGAA 327

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW+AAV+++L+PREGEK+    +REYYKESGDI+GT+RQLPR+LVAE+AILQ  ++
Sbjct: 328  LLRGEWKAAVSLILDPREGEKNTISTVREYYKESGDIDGTLRQLPRYLVAEKAILQSLKR 387

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSAK 1260
             PGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQ +GF QVVLGDLVY  E+   K
Sbjct: 388  SPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVYSKEDYKVK 447

Query: 1261 EMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDIILP 1440
            E  S V ECE             ++IS  DL + +N  VKVI++ED+ +G YTI+D++LP
Sbjct: 448  E--SFVAECEDVNDNNMDDYSNLDEISETDLPEERNIPVKVINEEDLKSGTYTIDDVLLP 505

Query: 1441 LPGSKVSYP 1467
            L GS+V YP
Sbjct: 506  LSGSRVIYP 514


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  639 bits (1647), Expect = e-180
 Identities = 323/491 (65%), Positives = 378/491 (76%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RY DFIVNEV  DGNVVHLT+LD P E  E+ + K  D  ++ ++ EIE FR L GD DV
Sbjct: 28   RYCDFIVNEVDSDGNVVHLTSLDAPPESMEKNETKISDQSNKGYASEIELFRSLVGDSDV 87

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E LK LIDQV SG+ +    +VLS SSDKSHRTA+HNFFKE +KFLVTDT+DGPD+SSKC
Sbjct: 88   ECLKGLIDQVASGIEDGVSPIVLSSSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKC 147

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     P+DSRGSDNW E++GKFLRFHLYKENKDTQEA+G
Sbjct: 148  IRVRLNSGGSHNNGRNSRKRKDRRDKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIG 207

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            L+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQ A+RLAALN++LIGIKVG+FCHV EG
Sbjct: 208  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAALNERLIGIKVGDFCHVREG 267

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            LVLGQL GNRFTITLR ++A++E+ IKA+A ALG+ GFINYFGLQRFGS S+PTHLIGAA
Sbjct: 268  LVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYFGLQRFGSGSVPTHLIGAA 327

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW+ AV+++L+PREG+     K REYYKES DIEGT+RQ PRHLVAERAILQC ++
Sbjct: 328  LLRGEWETAVSLILDPREGD-ILLLKAREYYKESDDIEGTLRQFPRHLVAERAILQCLKK 386

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSAK 1260
             PGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQNYG  QVVLGDLVYC  +G   
Sbjct: 387  YPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQVVLGDLVYC--KGDNA 444

Query: 1261 EMISSVLECEXXXXXXXXXXXXP--EDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
            E ++ V+  E               ++IS  DL + +N  VK +  ED+  G YTI+D++
Sbjct: 445  EKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAEDLLTGNYTIDDVV 504

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+  YP
Sbjct: 505  LPLPGSRAIYP 515


>gb|EXB39195.1| Multisubstrate pseudouridine synthase 7 [Morus notabilis]
          Length = 784

 Score =  628 bits (1619), Expect = e-177
 Identities = 312/491 (63%), Positives = 376/491 (76%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDFIVNEV  DGNVVHLT+LD P E  EE + +T D   + ++ EIESFR LAGD D 
Sbjct: 87   RYSDFIVNEVDTDGNVVHLTSLDAPPETREETRTETIDAGTKSYTSEIESFRCLAGDSDA 146

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E L+ LI+Q+ SG       +VLSPSSDKSHRT IHNFFK+  KFLVTDT+DGPD+SSKC
Sbjct: 147  ESLEALINQINSGGGEEVSPIVLSPSSDKSHRTEIHNFFKKNFKFLVTDTVDGPDASSKC 206

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     P+D RGSD+WPE++GKFLRFHLYKENKD+QEALG
Sbjct: 207  IRVRLNSGRHNNHGRNSKKRKERGDKPFDRRGSDDWPEHVGKFLRFHLYKENKDSQEALG 266

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            L+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALN +LIGI+VG+FC+V E 
Sbjct: 267  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNDRLIGIQVGDFCYVKEE 326

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            LVLGQL GNRFT+TLR ++A++E+ IKA+A+ALG+ GFINYFGLQRFGS S+PT+LIGA 
Sbjct: 327  LVLGQLSGNRFTVTLRGVVADSEETIKASASALGRRGFINYFGLQRFGSGSVPTYLIGAM 386

Query: 901  LLRGEWQAAVNMVLEPREGE--KDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            L RGEW+ AV+M+L+PREG+   D   K REYYKE+ DI+GT+RQLPRHLVAE AILQC 
Sbjct: 387  LFRGEWKDAVHMILDPREGDILLDVITKAREYYKETNDIDGTLRQLPRHLVAENAILQCL 446

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            ++CPGNYLQAL AIPRTLRMMYVHSYQSYLWNHAAS RVQ YG  QVV+GDLV+C E   
Sbjct: 447  KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKYGTDQVVVGDLVFCKEHNI 506

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
             K   ++  +C+             +++S  +L + +N  VKV++ EDI AG + I+D++
Sbjct: 507  EKVKGTASADCKDEDSNAIFGSHDIDEVSGAELPEERNNPVKVVAAEDILAGNFAIDDVV 566

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+V  P
Sbjct: 567  LPLPGSRVILP 577


>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  627 bits (1617), Expect = e-177
 Identities = 315/490 (64%), Positives = 380/490 (77%), Gaps = 1/490 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDFIVNEV  +GNVVHLT+LD P E  +E + KT D +++ ++ EI  FR LAGD D 
Sbjct: 70   RYSDFIVNEVDTEGNVVHLTSLDAPPEAVQEGETKTPDQLNKCYASEIIKFRSLAGDTDA 129

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            ++L+  I+Q+ SG   +   +VLSP SDKSHRTA+HNFFKE ++FLVTDT+DGPDSSSKC
Sbjct: 130  DRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKC 189

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     PYDSRGS +WPE++GKFLRFHLYKENKDTQEALG
Sbjct: 190  IRVRLNSGNNNKGRNSKKRKERGDK-PYDSRGSSHWPEHLGKFLRFHLYKENKDTQEALG 248

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            L+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALN++LIGIKVG+FC+V + 
Sbjct: 249  LIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVKDD 308

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
             +LGQL GNRFTI LR I+A++E+ IKA+  +LG++GFINYFGLQRFGS SIPTH IGA 
Sbjct: 309  FLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIGAT 368

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEWQAA + +L+PREGE+D   K REYYKE+GDIEGT+RQLPRHLVAERA+LQC ++
Sbjct: 369  LLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKK 428

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSAK 1260
            CPGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRV+ YG ++VVLGDLVYC  +G+  
Sbjct: 429  CPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYC--KGNDA 486

Query: 1261 EMISSV-LECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDIIL 1437
            E +  V  E E             ++IS  DL + +N  VK I+  DI+ G YTIED++L
Sbjct: 487  EKVKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVVL 546

Query: 1438 PLPGSKVSYP 1467
            P+PGS++ YP
Sbjct: 547  PMPGSRIIYP 556


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  624 bits (1609), Expect = e-176
 Identities = 314/502 (62%), Positives = 379/502 (75%), Gaps = 13/502 (2%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQ------EIESFRVL 162
            RY+DFIVNEV  DGNVVHLT L+ P ++ EE KE    + D   S+      EIE FR L
Sbjct: 79   RYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKECGAKVSDEKMSESKSYEAEIELFRSL 138

Query: 163  AGDPDVEKLKKLIDQVVS--GVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLD 336
            AGD D EKL+ LI QV S  G  ++   +VLSP SDK+HRTA+HNFFK+  KFLVTDT D
Sbjct: 139  AGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDSDKTHRTAVHNFFKQNFKFLVTDTTD 198

Query: 337  GPDSSSKCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKEN 516
            GPD+SSKCIRVRL                     P+DSRGS NWPE++GKFLRFHLYKEN
Sbjct: 199  GPDASSKCIRVRLDSGGHKNNGRNSKKRKERGEKPFDSRGSSNWPEHLGKFLRFHLYKEN 258

Query: 517  KDTQEALGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVG 696
            KDTQEALG++ KMLG + +SFGFAGTKDKR+VSTQRVTVFKQ+ASRLAALN +LIGIKVG
Sbjct: 259  KDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAALNDRLIGIKVG 318

Query: 697  NFCHVNEGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSI 876
            +FCHV EGL+LG+L GNRFT+TLR +IA++ED IKAAA +LG++GFINYFGLQRFG+ S+
Sbjct: 319  DFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYFGLQRFGTGSV 378

Query: 877  PTHLIGAALLRGEWQAAVNMVLEPREGE-----KDATRKIREYYKESGDIEGTIRQLPRH 1041
            PTHLIGAALLRGEW+ AV+M+L+PREG+         RK REYYKES DIEGT+RQLPRH
Sbjct: 379  PTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDIEGTLRQLPRH 438

Query: 1042 LVAERAILQCFRQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVL 1221
            LVAERA+LQC ++CPG+YLQA+ AIPRTLRMMYVH YQSYLWNHAAS RVQ YGF QV+L
Sbjct: 439  LVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERVQKYGFDQVLL 498

Query: 1222 GDLVYCNEEGSAKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDI 1401
            GDLVYC  + S KE +    EC              ++ S  DL + +N  VKV++ ED+
Sbjct: 499  GDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNTLVKVVTVEDM 558

Query: 1402 AAGKYTIEDIILPLPGSKVSYP 1467
            + G YT++D++LP+PGS+V +P
Sbjct: 559  STGNYTVDDVVLPMPGSRVIFP 580


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  620 bits (1598), Expect = e-175
 Identities = 317/504 (62%), Positives = 390/504 (77%), Gaps = 15/504 (2%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEI---AEEKKEKTDDLVDRDFSQEIESFRVLAGD 171
            RYSDFIVNEV  +GNVVHLT+L  P EI   AEE++E+  + V ++++ EIESFR LAGD
Sbjct: 76   RYSDFIVNEVDNNGNVVHLTSLHVPREIVEVAEEREEEITNQVGKNYAAEIESFRELAGD 135

Query: 172  PDVEKLKKLIDQVVSGVHN-NGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDS 348
             D ++L+  I+QV+S  +  N   ++LSP SDK+HRTA HNFFKE++KFLVTDT+DGPD+
Sbjct: 136  ADTQRLEAFINQVISEDNCINISPILLSPDSDKAHRTATHNFFKEKLKFLVTDTVDGPDA 195

Query: 349  SSKCIRVRLXXXXXXXXXXXXXXXXXXXXX-PYDSRGSDNWPENIGKFLRFHLYKENKDT 525
            SSKCIRVRL                      P+DSRGSD+WPE++GKFLRFHLYKENKDT
Sbjct: 196  SSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPFDSRGSDHWPEHLGKFLRFHLYKENKDT 255

Query: 526  QEALGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFC 705
            QEA+GL+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALN +LIGIKVG+FC
Sbjct: 256  QEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNDRLIGIKVGDFC 315

Query: 706  HVNEGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTH 885
            +VNEGL+LGQL GNRFT+TLR ++A++ED IK +A +LG++GFINYFGLQRFGS S+PTH
Sbjct: 316  YVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYFGLQRFGSGSVPTH 375

Query: 886  LIGAALLRGEWQAAVNMVLEPREGEKDA-------TRKIREYYKESGDIEGTIRQLPRHL 1044
            LIGAALLRGEW+ AV+M+L+PREG+           R  REYYKES DI+GT+RQLPR+L
Sbjct: 376  LIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDIDGTLRQLPRYL 435

Query: 1045 VAERAILQCFRQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLG 1224
             AERA+LQC ++CPGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQ YG  QVV+G
Sbjct: 436  TAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDQVVVG 495

Query: 1225 DLVYCNEEGSAKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKV---ISKE 1395
            DLVYC  + + +E+ S+   CE             ++ S  DLS+ ++  VKV   ++ E
Sbjct: 496  DLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTLVKVEQAVNAE 555

Query: 1396 DIAAGKYTIEDIILPLPGSKVSYP 1467
            D++ G YTI D+ILP+PGS+VSYP
Sbjct: 556  DLSTGNYTINDVILPMPGSRVSYP 579


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  618 bits (1593), Expect = e-174
 Identities = 310/493 (62%), Positives = 380/493 (77%), Gaps = 4/493 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIA--EEKKEKTDDLVDRDFSQEIESFRVLAGDP 174
            RY DFIVNEV  D  VVHLT+LD P E A  E  + K  D ++R ++ EIESFR LAGD 
Sbjct: 72   RYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEHNETKASDQLNRSYASEIESFRSLAGDS 131

Query: 175  DVEKLKKLIDQVVSGVHNNG-ESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSS 351
            D + L+ LI+QV SG + +    +VLS +SDKSHRTAIHNFFK+  KFLVTDT+DGPD+S
Sbjct: 132  DAQCLETLINQVTSGKNEDSIPPIVLSANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDAS 191

Query: 352  SKCIRVRLXXXXXXXXXXXXXXXXXXXXX-PYDSRGSDNWPENIGKFLRFHLYKENKDTQ 528
            SKCIRVRL                      P+DSRGS+NWPE +GKFLRFHLYKENKDTQ
Sbjct: 192  SKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQ 251

Query: 529  EALGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCH 708
            EALGL++KMLG  PRSFGFAGTKDKRSVSTQRVTVFKQRAS+LAALN++LIGI++G+FC+
Sbjct: 252  EALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY 311

Query: 709  VNEGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHL 888
            V EGL+LGQL GNRFTITLR ++ ++ED+IKA+A +LG+NGFINYFGLQRFGS S+PTHL
Sbjct: 312  VKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHL 371

Query: 889  IGAALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQ 1068
            +GA LLRGEW++AV M+L+PREGE++   K REYYKE+ DI+GT+R+LPRHLVAERAILQ
Sbjct: 372  VGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLRKLPRHLVAERAILQ 431

Query: 1069 CFRQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEE 1248
            C ++CPGNYLQAL AIPRTLRMMYVHSYQS+LWNHAAS RVQ +G   VV+GDLV+C  +
Sbjct: 432  CLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGD 491

Query: 1249 GSAKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIED 1428
             + KE+     E E             +++   D  D ++  VK ++ EDI +GKYTI+D
Sbjct: 492  DTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTIDD 551

Query: 1429 IILPLPGSKVSYP 1467
            ++LPLPGS+V YP
Sbjct: 552  VVLPLPGSRVIYP 564


>ref|XP_007208186.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
            gi|462403828|gb|EMJ09385.1| hypothetical protein
            PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  616 bits (1588), Expect = e-174
 Identities = 310/493 (62%), Positives = 376/493 (76%), Gaps = 4/493 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDF+VNEV  + NVVHLT LD P+E  +E + KT D   +D++ EIESFR L    D 
Sbjct: 28   RYSDFMVNEVDTEENVVHLTNLDAPAETVKEIETKTHDATSKDYTTEIESFRSLVDPDDA 87

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E+L+ +I+Q+ SG  ++   +VLSP  DKSHRTA+HNFFKE  KFLVTDT+DGPD+SSKC
Sbjct: 88   ERLEAIINQINSGSEDSILPIVLSPDYDKSHRTAVHNFFKENFKFLVTDTVDGPDASSKC 147

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVR+                     P+DSRGSD+W EN+GKFLRFHLYKENKDTQEALG
Sbjct: 148  IRVRINSGGQNSRGRNSRKRKERGDKPFDSRGSDDWSENVGKFLRFHLYKENKDTQEALG 207

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            ++AKMLG +PRSFGFAGTKDKR+V+TQRVTVFKQ ASRLAALN +LIGIKVG+FC+V EG
Sbjct: 208  IIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLASRLAALNDRLIGIKVGDFCYVKEG 267

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            LVLGQL GNRFTITLR ++A++ED IKA+  ALGK GFINYFGLQRFGS S+PTHLIGA 
Sbjct: 268  LVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYFGLQRFGSGSVPTHLIGAT 327

Query: 901  LLRGEWQAAVNMVLEPREGE--KDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            LLRGEW++ V++ L+PREG+         REYYKE+ DIEGT+RQLPRHLV+E+AILQC 
Sbjct: 328  LLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGTLRQLPRHLVSEKAILQCL 387

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYC--NEE 1248
            ++CPGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQ YG  +VVLGDLVYC  NE 
Sbjct: 388  KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCKGNET 447

Query: 1249 GSAKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIED 1428
                E++SS  +C              +DIS  +L + +   VK ++ EDI +G YTI+D
Sbjct: 448  EKVSEVVSS--KCVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYTIDD 505

Query: 1429 IILPLPGSKVSYP 1467
            ++LP+PGS+V +P
Sbjct: 506  VVLPMPGSRVIFP 518


>ref|XP_004302031.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 2
            [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  612 bits (1577), Expect = e-172
 Identities = 304/494 (61%), Positives = 376/494 (76%), Gaps = 5/494 (1%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDF+VNEV ++GNVVHLT L+ P E+ +E   KT+D   +D+S EIE FR LA   DV
Sbjct: 27   RYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTEDAASKDYSAEIEKFRCLASGEDV 86

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E+L+  I +V SG  +    +VLSP  DK HRTA+HNFFKE +KFLVTD +DGPD+SSKC
Sbjct: 87   ERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKC 146

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     P+DSRG D+W E++GKFLRFHL+KENKDTQEALG
Sbjct: 147  IRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENKDTQEALG 206

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            ++ KMLG +PR+FGFAGTKDKR+V+ QRVTVFKQ ASRLAALN +LIGIKVG+FC+V EG
Sbjct: 207  VIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGDFCYVKEG 266

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            L LGQL GNRFTITLR ++A++EDII+A+A ALGK GF+NYFGLQRFGS SIPTHLIGA+
Sbjct: 267  LSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTHLIGAS 326

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW++ V+M+LEPREGE+D   + R+YYKES DI+GT+R+LPR+LVAERA+LQC ++
Sbjct: 327  LLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVLQCLKK 386

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYC--NEEGS 1254
            CPGNY QAL A+PRTLRMMYVHSYQSYLWNHAASMRVQ YG  +VV+GDLVYC  +E   
Sbjct: 387  CPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYCKGHETEK 446

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXP---EDISVVDLSDVQNASVKVISKEDIAAGKYTIE 1425
               ++SS    E            P   +DIS  ++ + + + VK ++ EDI  G YTI+
Sbjct: 447  VTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDINNGTYTID 506

Query: 1426 DIILPLPGSKVSYP 1467
            DI+LPLPGS+V +P
Sbjct: 507  DIVLPLPGSRVIFP 520


>ref|XP_004302030.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform 1
            [Fragaria vesca subsp. vesca]
          Length = 701

 Score =  612 bits (1577), Expect = e-172
 Identities = 304/494 (61%), Positives = 376/494 (76%), Gaps = 5/494 (1%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDRDFSQEIESFRVLAGDPDV 180
            RYSDF+VNEV ++GNVVHLT L+ P E+ +E   KT+D   +D+S EIE FR LA   DV
Sbjct: 27   RYSDFMVNEVDMEGNVVHLTNLEAPPEVVKENGAKTEDAASKDYSAEIEKFRCLASGEDV 86

Query: 181  EKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSKC 360
            E+L+  I +V SG  +    +VLSP  DK HRTA+HNFFKE +KFLVTD +DGPD+SSKC
Sbjct: 87   ERLEAFIREVNSGSEDGVMPIVLSPDYDKVHRTAVHNFFKENLKFLVTDAVDGPDASSKC 146

Query: 361  IRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEALG 540
            IRVRL                     P+DSRG D+W E++GKFLRFHL+KENKDTQEALG
Sbjct: 147  IRVRLNSGGQNGRGRNSKKRKERGDKPFDSRGVDDWSEHVGKFLRFHLFKENKDTQEALG 206

Query: 541  LLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNEG 720
            ++ KMLG +PR+FGFAGTKDKR+V+ QRVTVFKQ ASRLAALN +LIGIKVG+FC+V EG
Sbjct: 207  VIGKMLGIQPRAFGFAGTKDKRAVTCQRVTVFKQFASRLAALNDRLIGIKVGDFCYVKEG 266

Query: 721  LVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGAA 900
            L LGQL GNRFTITLR ++A++EDII+A+A ALGK GF+NYFGLQRFGS SIPTHLIGA+
Sbjct: 267  LSLGQLLGNRFTITLRGVVADSEDIIQASANALGKQGFVNYFGLQRFGSGSIPTHLIGAS 326

Query: 901  LLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFRQ 1080
            LLRGEW++ V+M+LEPREGE+D   + R+YYKES DI+GT+R+LPR+LVAERA+LQC ++
Sbjct: 327  LLRGEWKSTVSMMLEPREGERDVITEARKYYKESNDIDGTLRKLPRYLVAERAVLQCLKK 386

Query: 1081 CPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYC--NEEGS 1254
            CPGNY QAL A+PRTLRMMYVHSYQSYLWNHAASMRVQ YG  +VV+GDLVYC  +E   
Sbjct: 387  CPGNYSQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVVGDLVYCKGHETEK 446

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXP---EDISVVDLSDVQNASVKVISKEDIAAGKYTIE 1425
               ++SS    E            P   +DIS  ++ + + + VK ++ EDI  G YTI+
Sbjct: 447  VTGIVSSECVDENVNDENCDDTFDPNHLDDISETNVPEARVSLVKAVTAEDINNGTYTID 506

Query: 1426 DIILPLPGSKVSYP 1467
            DI+LPLPGS+V +P
Sbjct: 507  DIVLPLPGSRVIFP 520


>ref|XP_006432989.1| hypothetical protein CICLE_v10003382mg [Citrus clementina]
            gi|557535111|gb|ESR46229.1| hypothetical protein
            CICLE_v10003382mg [Citrus clementina]
          Length = 697

 Score =  609 bits (1570), Expect = e-171
 Identities = 309/493 (62%), Positives = 378/493 (76%), Gaps = 4/493 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIA--EEKKEKTDDLVDRDFSQEIESFRVLAGDP 174
            RY DFIVNEV  D  VVHLT+LD P E A  E  + K  D ++R ++ EIESFR LAGD 
Sbjct: 28   RYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVEHNETKASDQLNRSYASEIESFRSLAGDS 87

Query: 175  DVEKLKKLIDQVVSGVHNNG-ESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSS 351
            D + L+ LI+QV SG + +    +VLS +SDKSHRTAIHNFFK+  KFLVTDT+DGPD+S
Sbjct: 88   DAQCLETLINQVTSGKNEDSIPPIVLSANSDKSHRTAIHNFFKDNFKFLVTDTVDGPDAS 147

Query: 352  SKCIRVRLXXXXXXXXXXXXXXXXXXXXX-PYDSRGSDNWPENIGKFLRFHLYKENKDTQ 528
            SKCIRVRL                      P+DSRGS+NWPE +GKFLRFHLYKENKDTQ
Sbjct: 148  SKCIRVRLNSGGNNNSMGRNSKKRKERGDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQ 207

Query: 529  EALGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCH 708
            EALGL++KMLG  PRSFGFAGTKDKRSVSTQRVTVFKQRAS+LAALN++LIGI++G+FC+
Sbjct: 208  EALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAALNKRLIGIRLGDFCY 267

Query: 709  VNEGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHL 888
            V EGL+LGQL GNRFTITLR ++ ++ED+IKA+A +LG+NGFINYFGLQRFGS S+PTHL
Sbjct: 268  VKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYFGLQRFGSGSVPTHL 327

Query: 889  IGAALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQ 1068
            +GA LLRGEW++AV M+L+PREG+     K REYYKE+ DI+GT+R+LPRHLVAERAILQ
Sbjct: 328  VGATLLRGEWKSAVKMILDPREGD-ILLFKAREYYKETDDIDGTLRKLPRHLVAERAILQ 386

Query: 1069 CFRQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEE 1248
            C ++CPGNYLQAL AIPRTLRMMYVHSYQS+LWNHAAS RVQ +G   VV+GDLV+C  +
Sbjct: 387  CLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGTEHVVVGDLVFCKGD 446

Query: 1249 GSAKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIED 1428
             + KE+     E E             +++   D  D ++  VK ++ EDI +GKYTI+D
Sbjct: 447  DTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTVTAEDINSGKYTIDD 506

Query: 1429 IILPLPGSKVSYP 1467
            ++LPLPGS+V YP
Sbjct: 507  VVLPLPGSRVIYP 519


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  608 bits (1569), Expect = e-171
 Identities = 306/491 (62%), Positives = 379/491 (77%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIA--EEKKEKTDDLVDRDFSQEIESFRVLAGDP 174
            RY+DFIVNEV +DGNVVHLT+LD P E+A  EE K K+ D V ++++  +ESF+ ++   
Sbjct: 64   RYADFIVNEVDMDGNVVHLTSLDLPPEMAVKEEDKAKSCDNVPQNYTSAVESFKSISSVT 123

Query: 175  DVEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSS 354
            D E+L+ LI+QV SG       VVL PSSDKS RTAIHNF KE  KFLVTDT+DGPDS+S
Sbjct: 124  DAERLEILINQVTSGTDGEVLPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDSTS 183

Query: 355  KCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEA 534
            KCIRVR+                     P+DSRGS++WPE++GKFLRFHLYKENKDTQEA
Sbjct: 184  KCIRVRVNSGANNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENKDTQEA 243

Query: 535  LGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVN 714
            LGL+ KMLG +P+SFGF+GTKDKRSVSTQRVTVFKQ+AS+LAALN++L GIKVG+FC+V 
Sbjct: 244  LGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAALNKRLFGIKVGDFCNVK 303

Query: 715  EGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIG 894
            EGL+LGQL GNRFTITLR ++A++E+ IK +A +LGK+GFINYFGLQRFGS S+PTH +G
Sbjct: 304  EGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYFGLQRFGSGSVPTHHVG 363

Query: 895  AALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            AALL+GEW+ AV+M+L+PRE E+      REYYKE+GDI+GT+RQLPR+LVAERAILQC 
Sbjct: 364  AALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERAILQCL 423

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            ++CPGNYLQAL  IPRTLRMMYVHSYQSYLWN+AAS+RV+NYG  QVVLGDLV   +  +
Sbjct: 424  KKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQVVLGDLV-STKVDA 482

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
            AK M+ S+                 +D +VVDL   ++  VKV+S ED+ AG Y+  DI+
Sbjct: 483  AKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIEDLEAGTYSTSDIV 542

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+V YP
Sbjct: 543  LPLPGSRVIYP 553


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  604 bits (1557), Expect = e-170
 Identities = 313/521 (60%), Positives = 382/521 (73%), Gaps = 32/521 (6%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEI-------------AEEKKEKTDDLVDRDFSQE 141
            RYSDFIVNEV  +GNVVHLT+LD P E+              +E + KT D +++ ++ E
Sbjct: 70   RYSDFIVNEVDTEGNVVHLTSLDAPPEVMIDVFSLNKFTQAVQEGETKTPDQLNKCYASE 129

Query: 142  IESFRVLAGDPDVEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLV 321
            I  FR LAGD D ++L+  I+Q+ SG   +   +VLSP SDKSHRTA+HNFFKE ++FLV
Sbjct: 130  IIKFRSLAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLV 189

Query: 322  TDTLDGPDSSSKCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFH 501
            TDT+DGPDSSSKCIRVRL                     PYDSRGS +WPE++GKFLRFH
Sbjct: 190  TDTVDGPDSSSKCIRVRLNSGNNNKGRNSKKRKERGDK-PYDSRGSSHWPEHLGKFLRFH 248

Query: 502  LYKENKDTQEALGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLI 681
            LYKENKDTQEALGL+ KMLG +PRSFGFAGTKDKRSVSTQRVTVFKQ ASRLAALN++LI
Sbjct: 249  LYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLI 308

Query: 682  GIKVGNFCHVNEGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRF 861
            GIKVG+FC+V +  +LGQL GNRFTI LR I+A++E+ IKA+  +LG++GFINYFGLQRF
Sbjct: 309  GIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRF 368

Query: 862  GSSSIPTHLIGAALLRGEWQAAVNMVLEPREGEKDA------------------TRKIRE 987
            GS SIPTH IGA LLRGEWQAA + +L+PREG+  +                  T++ RE
Sbjct: 369  GSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRARE 428

Query: 988  YYKESGDIEGTIRQLPRHLVAERAILQCFRQCPGNYLQALLAIPRTLRMMYVHSYQSYLW 1167
            YYKE+GDIEGT+RQLPRHLVAERA+LQC ++CPGNYLQAL AIPRTLRMMYVHSYQSYLW
Sbjct: 429  YYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 488

Query: 1168 NHAASMRVQNYGFHQVVLGDLVYCNEEGSAKEMISSV-LECEXXXXXXXXXXXXPEDISV 1344
            NHAASMRV+ YG ++VVLGDLVYC  +G+  E +  V  E E             ++IS 
Sbjct: 489  NHAASMRVEKYGSNEVVLGDLVYC--KGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISG 546

Query: 1345 VDLSDVQNASVKVISKEDIAAGKYTIEDIILPLPGSKVSYP 1467
             DL + +N  VK I+  DI+ G YTIED++LP+PGS++ YP
Sbjct: 547  TDLPEGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYP 587


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  603 bits (1554), Expect = e-170
 Identities = 301/492 (61%), Positives = 371/492 (75%), Gaps = 3/492 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSE-IAEEKKEKTDDLVDRDFSQEIESFRVLAGDPD 177
            RYSDFIVNEV  DGNVVHLT+LD P E I  E          + ++ EIE FR LAGD D
Sbjct: 67   RYSDFIVNEVDTDGNVVHLTSLDAPPEVIVSESGPTIVHSTSQSYASEIELFRSLAGDSD 126

Query: 178  VEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSSK 357
             E L+  + Q+ SGV+++   +V SP +DK+HRTA+HNFFK + KFLVTDT+DGPDSSSK
Sbjct: 127  AEILEIFLKQINSGVNDDILPIVFSPDTDKTHRTAVHNFFK-KFKFLVTDTIDGPDSSSK 185

Query: 358  CIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEAL 537
            C+RVR+                     P+DSRGSDNWPE++GKFLRFHLYKENKDTQEAL
Sbjct: 186  CVRVRVDSGAQNNRGRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEAL 245

Query: 538  GLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVNE 717
            GL+ KMLG + RSFGFAGTKDKRS+STQRVTVFKQ ASR+AALN +LIGIK+GNF ++ E
Sbjct: 246  GLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAALNDRLIGIKLGNFSYIQE 305

Query: 718  GLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIGA 897
            GL+LGQL GNRFTITLR ++A +ED+IKA+A ALG++GFINYFGLQRFGS S+PTHL+GA
Sbjct: 306  GLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYFGLQRFGSGSVPTHLVGA 365

Query: 898  ALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCFR 1077
            +LLRGEW+ AVNM+L+PREG+     + R+YYKES DI+GT++QLPR+LVAERAILQC +
Sbjct: 366  SLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLPRYLVAERAILQCLK 425

Query: 1078 QCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGSA 1257
            +CPGNYLQAL AIPRTLRMMYVHSYQSYLWNHAASMRVQ YG  +VV+GDLVYC E  + 
Sbjct: 426  KCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKVVVGDLVYCKENHTE 485

Query: 1258 KEMI--SSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDI 1431
               +  S   E E             E++  + L   ++  VK ++  D+ +G +TI+D+
Sbjct: 486  TAAVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVTAGDVLSGNFTIDDV 545

Query: 1432 ILPLPGSKVSYP 1467
            +LPLPGS+V YP
Sbjct: 546  VLPLPGSRVLYP 557


>ref|XP_006408145.1| hypothetical protein EUTSA_v10022286mg, partial [Eutrema salsugineum]
            gi|557109291|gb|ESQ49598.1| hypothetical protein
            EUTSA_v10022286mg, partial [Eutrema salsugineum]
          Length = 692

 Score =  590 bits (1521), Expect = e-166
 Identities = 298/491 (60%), Positives = 374/491 (76%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKT--DDLVDRDFSQEIESFRVLAGDP 174
            RY+DFIVNEV +DGNVVHLT+LD   E+ E+++EKT   D V + ++  IESFR ++   
Sbjct: 66   RYADFIVNEVDMDGNVVHLTSLDVSPEMDEKEEEKTKSSDDVPQSYASAIESFRSISSVT 125

Query: 175  DVEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSS 354
            D E+L+ LI+QV S   +    VV  PSSDKS RTAIHNF KE  KFLVTDT+DGPD +S
Sbjct: 126  DAERLETLINQVTSVTDDEISPVVFDPSSDKSKRTAIHNFVKENFKFLVTDTVDGPDPTS 185

Query: 355  KCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEA 534
            KCIRVR+                     P+DSRGS++WPE++GKF++FHLYKENKDTQEA
Sbjct: 186  KCIRVRVNSADHNSRGKRSKKRKERGDKPFDSRGSEHWPEHLGKFVKFHLYKENKDTQEA 245

Query: 535  LGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVN 714
            LGL+ KMLG +P+SFGF+GTKDKRSVS+QRVTVFKQ+AS+LAALN++L GIKVG+FCHV 
Sbjct: 246  LGLIGKMLGVQPKSFGFSGTKDKRSVSSQRVTVFKQQASKLAALNKRLFGIKVGDFCHVK 305

Query: 715  EGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIG 894
            EGL+LGQL GNRFTITLR ++A++E+ IK +A +LGK+GFINYFGLQRFGS S+PTH +G
Sbjct: 306  EGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVPTHHVG 365

Query: 895  AALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            AA+L+GEW+ AV+M+L+PRE       + REYYKE+GDI+GT+RQLPR+LVAERAILQC 
Sbjct: 366  AAVLKGEWKEAVDMILDPRE-----INEAREYYKETGDIDGTLRQLPRYLVAERAILQCL 420

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            ++CPGNYLQAL  IPRTLRMMYVHSYQSYLWN+AAS+RVQ YG +QVVLGDLV   +   
Sbjct: 421  KKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLV-STKVDD 479

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
            AK ++ S+                 +D +VVDLS  ++  VKV+  ED+ AG Y+  DI+
Sbjct: 480  AKRIVGSLTSEHKENNEEALDCDQLDDTAVVDLSGERSDLVKVVDIEDMEAGTYSTSDIV 539

Query: 1435 LPLPGSKVSYP 1467
            LPLPGS+V YP
Sbjct: 540  LPLPGSRVIYP 550


>ref|XP_007147153.1| hypothetical protein PHAVU_006G100200g [Phaseolus vulgaris]
            gi|561020376|gb|ESW19147.1| hypothetical protein
            PHAVU_006G100200g [Phaseolus vulgaris]
          Length = 691

 Score =  588 bits (1515), Expect = e-165
 Identities = 291/491 (59%), Positives = 369/491 (75%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDR--DFSQEIESFRVLAGDP 174
            RYSDFIVNEV  DG VV L++LD P E  E  +E   +  D    ++  IE+F++LAG+P
Sbjct: 30   RYSDFIVNEVDRDGAVVQLSSLDAPEEELESVQENGTNTSDTVVSYASRIEAFKILAGEP 89

Query: 175  DVEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSS 354
            D   L++ ++++ +G   +   +VLSP SDKSHR A+HNFFKE  KFLVTD +DGPD+S 
Sbjct: 90   DAILLEEFVNKINAGGEVSVSPIVLSPDSDKSHRKAVHNFFKENFKFLVTDVVDGPDASL 149

Query: 355  KCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEA 534
            KCIRVRL                     P+DSRGS+NWPEN+GKFLRFH+YKENKDT EA
Sbjct: 150  KCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENWPENVGKFLRFHIYKENKDTHEA 209

Query: 535  LGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVN 714
            LG++  MLG +P+SFGFAGTKDKR+V+TQRVTV+KQRASRLA+LN++L GIK+G+FC+V 
Sbjct: 210  LGVIGNMLGIQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLGDFCYVK 269

Query: 715  EGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIG 894
            EGL LGQL GNRFTITLR I++++EDIIKA+A ALG+ GFINYFGLQRFGS S+PTHLIG
Sbjct: 270  EGLCLGQLMGNRFTITLRGIVSDSEDIIKASADALGRLGFINYFGLQRFGSGSLPTHLIG 329

Query: 895  AALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            AALLRGEW+ AV+M+L+PREGE+ A  K R+YYKE+ D+ GT++QLPR+LVAERA+LQ  
Sbjct: 330  AALLRGEWKLAVDMILDPREGERSAIAKARKYYKENNDVVGTLKQLPRYLVAERAVLQSL 389

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            +  PGNYLQAL +IPRTLR++Y+HSYQSYLWNHAAS RVQ YG  QVVLGDLV C E  +
Sbjct: 390  KTSPGNYLQALKSIPRTLRLLYIHSYQSYLWNHAASKRVQKYGTEQVVLGDLVNCKENST 449

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
            AK  I+  +  E             ++   VD+ +  N+ VKV+  ED+ +G YTI+D+I
Sbjct: 450  AK--ITEFVGSEYPEDCSGGYDSSNQNEISVDIHEDINSCVKVVDAEDLNSGCYTIDDVI 507

Query: 1435 LPLPGSKVSYP 1467
            LP+PGS+V YP
Sbjct: 508  LPMPGSRVKYP 518


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  585 bits (1509), Expect = e-164
 Identities = 293/491 (59%), Positives = 367/491 (74%), Gaps = 2/491 (0%)
 Frame = +1

Query: 1    RYSDFIVNEVGLDGNVVHLTTLDCPSEIAEEKKEKTDDLVDR--DFSQEIESFRVLAGDP 174
            RYSDFIVNEV  DG VV L++LD P E  E  +E   +  D    ++ +IESF+ LAGD 
Sbjct: 30   RYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQENGTNTSDNVVSYASQIESFKSLAGDS 89

Query: 175  DVEKLKKLIDQVVSGVHNNGESVVLSPSSDKSHRTAIHNFFKERMKFLVTDTLDGPDSSS 354
            D   L++ I+++ +G  +    +VLSP SDKSHR A+HNFFKE  KFLVTD +DGPD+SS
Sbjct: 90   DAVLLEEFINKINAGGEDGVSPIVLSPDSDKSHRKAMHNFFKENFKFLVTDVVDGPDASS 149

Query: 355  KCIRVRLXXXXXXXXXXXXXXXXXXXXXPYDSRGSDNWPENIGKFLRFHLYKENKDTQEA 534
            KCIRVRL                     P+DSRGS+NWP+N+GKFLRFHLYKENKDT EA
Sbjct: 150  KCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENWPKNVGKFLRFHLYKENKDTHEA 209

Query: 535  LGLLAKMLGTKPRSFGFAGTKDKRSVSTQRVTVFKQRASRLAALNQKLIGIKVGNFCHVN 714
            LG++  ML  +P+SFGFAGTKDKR+V+TQRVTV+KQRASRLA+LN++L GIK+G+FC+V 
Sbjct: 210  LGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLGDFCYVK 269

Query: 715  EGLVLGQLQGNRFTITLRSIIAENEDIIKAAATALGKNGFINYFGLQRFGSSSIPTHLIG 894
            EGL LGQL GNRFTITLR I+A++EDIIKA+A ALG++GFINYFGLQRFGS S+PTHLIG
Sbjct: 270  EGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTHLIG 329

Query: 895  AALLRGEWQAAVNMVLEPREGEKDATRKIREYYKESGDIEGTIRQLPRHLVAERAILQCF 1074
            AALL+GEW+ AV+M+L+PR+GEK A  K R+YYKES D+ GT++QLPR+LVAERA+LQ  
Sbjct: 330  AALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVLQTL 389

Query: 1075 RQCPGNYLQALLAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGFHQVVLGDLVYCNEEGS 1254
            +  PGNYLQAL +IPRTLRM+YVHSYQSYLWNHAAS RVQ YG   VVLGDLVYC E  +
Sbjct: 390  KTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENST 449

Query: 1255 AKEMISSVLECEXXXXXXXXXXXXPEDISVVDLSDVQNASVKVISKEDIAAGKYTIEDII 1434
             K  ++  +  E             ED    ++ + +  SVKV+  ED+ +G YTI+D+I
Sbjct: 450  GK--VTESVGSEYAEDCSGRYDSNNEDEISGEIHE-EIDSVKVVDVEDLNSGYYTIDDVI 506

Query: 1435 LPLPGSKVSYP 1467
            LP+PGS++ YP
Sbjct: 507  LPMPGSRIKYP 517