BLASTX nr result

ID: Mentha26_contig00027553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00027553
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345796.1| PREDICTED: double-stranded RNA-binding prote...    61   2e-07
gb|EYU39599.1| hypothetical protein MIMGU_mgv1a006880mg [Mimulus...    60   2e-07
ref|XP_004505998.1| PREDICTED: double-stranded RNA-binding prote...    57   3e-06
ref|XP_004168816.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...    56   4e-06
ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding prote...    56   4e-06
ref|XP_004239670.1| PREDICTED: double-stranded RNA-binding prote...    55   8e-06
ref|XP_007132261.1| hypothetical protein PHAVU_011G079700g [Phas...    55   1e-05

>ref|XP_006345796.1| PREDICTED: double-stranded RNA-binding protein 2-like [Solanum
           tuberosum]
          Length = 506

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEH-PSIKVEDPRILRPTTPRVENPSLSRDVP 177
           VMRPP +G+APPV IRQAVPV+AA PVR E  P++     R++R +   V        VP
Sbjct: 333 VMRPPGLGLAPPVCIRQAVPVYAAPPVRAEELPTL----DRVMRHSGLGVAPVYAVPSVP 388

Query: 178 FSKLPPVLAEDPLGYKKP 231
             K PP+L ++PL  K P
Sbjct: 389 --KAPPLLVDEPLASKAP 404


>gb|EYU39599.1| hypothetical protein MIMGU_mgv1a006880mg [Mimulus guttatus]
          Length = 428

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
 Frame = +1

Query: 10  PPTMGMAPPVSIRQAVPVFAAAPVRMEHPS-----IKVEDPRILRPTTPRVENPSLSRDV 174
           PP   +APPV +R +VP F AAPVRM+  +     +K+EDPRI +  T  VE P +S  +
Sbjct: 328 PPAPAIAPPVCVRHSVPAF-AAPVRMKERTTGNVVVKIEDPRISKSPTVEVEKPPVS--L 384

Query: 175 PFSKLPPVLAEDPLGYKKPVPVAPNSEAQTAQVDLPRTEVLTVEPQLPKICSPPVSTKSS 354
           P S++ P                      T Q +   +EV T          PP S+++S
Sbjct: 385 PSSEVVP----------------------TVQAEATVSEVST----------PPASSQAS 412

Query: 355 AEETTAEKDEVQE 393
           AEET+AE + +++
Sbjct: 413 AEETSAEIEGLKD 425


>ref|XP_004505998.1| PREDICTED: double-stranded RNA-binding protein 2-like [Cicer
           arietinum]
          Length = 451

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEHP-SIKVEDPRILRPTTPRVENP-SLSRDV 174
           ++RPP + +A P++IRQAVPV AA PVR++ P  I   DP +      RVE P S+S++ 
Sbjct: 314 IIRPPPVHVASPINIRQAVPVNAAPPVRLDEPVPISKVDPALYAAPPVRVEEPVSISKEG 373

Query: 175 PFSKL---PPVLAED--PLGYKKPVPV 240
           P S +   PPV  +D  P G     PV
Sbjct: 374 PASAVYSTPPVQKDDLVPNGKDDSAPV 400


>ref|XP_004168816.1| PREDICTED: LOW QUALITY PROTEIN: double-stranded RNA-binding protein
           2-like [Cucumis sativus]
          Length = 414

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEHPSIKVEDPRILRPTTPRVENPSLSRDVPF 180
           V+R P + +APPVSIRQA+PVFAA PVR E+P + V+      P  P+ + P+LS  V  
Sbjct: 317 VIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPV-VKKEECPAPAAPKEDPPALSAPVTV 375

Query: 181 SKLPPVLAEDPLGYKKPVPVAPNSEAQTAQVD 276
           +   P         ++      NS  +T  ++
Sbjct: 376 TVPSPPTVVSTAEVEQATFTVVNSPEETKTLE 407


>ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding protein 2-like [Cucumis
           sativus]
          Length = 414

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEHPSIKVEDPRILRPTTPRVENPSLSRDVPF 180
           V+R P + +APPVSIRQA+PVFAA PVR E+P + V+      P  P+ + P+LS  V  
Sbjct: 317 VIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPV-VKKEECPAPAAPKEDPPALSAPVTV 375

Query: 181 SKLPPVLAEDPLGYKKPVPVAPNSEAQTAQVD 276
           +   P         ++      NS  +T  ++
Sbjct: 376 TVPSPPTVVSTAEVEQATFTVVNSPEETKTLE 407


>ref|XP_004239670.1| PREDICTED: double-stranded RNA-binding protein 2-like [Solanum
           lycopersicum]
          Length = 553

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEHPSIKVEDPRILRPT----TPRVENPSLSR 168
           VMRPP +G+APPV IRQAVPV+AA PVR E  S      R++R +     P    PS+ +
Sbjct: 333 VMRPPGLGVAPPVCIRQAVPVYAAPPVRAEELSTL---DRVMRHSGLGMAPVYAVPSVPK 389

Query: 169 DVPFSKLPPVLAEDPLGYKKPVPVAPNSEAQTAQVDLPRTEVLTVEPQLP------KICS 330
                   P+L ++PL  K P         +   +DLP  + +  + + P      K CS
Sbjct: 390 -------APLLVDEPLASKAP---------EMQVLDLPTCKAVLGKAESPHDHSEEKSCS 433

Query: 331 PPVSTK 348
               TK
Sbjct: 434 EVQPTK 439


>ref|XP_007132261.1| hypothetical protein PHAVU_011G079700g [Phaseolus vulgaris]
           gi|561005261|gb|ESW04255.1| hypothetical protein
           PHAVU_011G079700g [Phaseolus vulgaris]
          Length = 410

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   VMRPPTMGMAPPVSIRQAVPVFAAAPVRMEHPSIKVEDPRILRP-TTPRVENPSLSRDVP 177
           V+R P + +APPV+IRQAVPVFAA PV+++ P   V     L P TTP+ + P++S    
Sbjct: 321 VLRAPPVRVAPPVTIRQAVPVFAAPPVQIDEP---VPSLTSLEPVTTPKDDAPTISSPSQ 377

Query: 178 FSKLPPVLAEDPLGYKKPVPVAPNSEAQTAQ 270
             KLP  + E  +  +K +P    +E++T Q
Sbjct: 378 EEKLPVKIPEIEIKTEK-IP----AESETVQ 403


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