BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00027081
         (1833 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               655   0.0  
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   627   e-177
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   614   e-173
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     606   e-171
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   606   e-170
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   605   e-170
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         604   e-170
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         604   e-170
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   604   e-170
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     604   e-170
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   604   e-170
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   603   e-170
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   603   e-170
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   603   e-170
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   603   e-170
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        603   e-169
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]         602   e-169
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   602   e-169
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       602   e-169
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]         601   e-169

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  655 bits (1689), Expect = 0.0
 Identities = 319/597 (53%), Positives = 429/597 (71%), Gaps = 5/597 (0%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIE-----IAVEPRRSKRQRTEKTYGTD 1646
            EHIFP+K+                  SG S Q I+     ++ + RRSKRQR E ++G D
Sbjct: 718  EHIFPLKS------------------SGTSEQPIDSVSDTLSEDVRRSKRQRKETSFGND 759

Query: 1645 FITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTWD 1466
            F T                 +++  DP+S+  A S+ DA  W +AI++E++SI  N+TW 
Sbjct: 760  FYT-----------------YLVENDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWT 802

Query: 1465 LVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARISTI 1286
            LVDLP   KPI  KWIFKKK  PDGSI+++KARLV  G +QK ++D+FDT++PV RIS+I
Sbjct: 803  LVDLPKGAKPIGCKWIFKKKYHPDGSIEKYKARLVAKGFTQKHNIDYFDTFAPVTRISSI 862

Query: 1285 RTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLK 1106
            R L+ALASIH LV+HQMDVKT FLNG+L+EEIY+ QPEGCVV G + KVC+L +SLYGLK
Sbjct: 863  RVLLALASIHKLVIHQMDVKTTFLNGELEEEIYMTQPEGCVVLGQKEKVCKLLKSLYGLK 922

Query: 1105 QAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVEI 926
            QAP QW+EK  N +L  GF  N ++ C+Y+++   + V+ICLYVDDMLIFGTC DIV + 
Sbjct: 923  QAPKQWHEKLDNVLLCEGFSTNDADKCVYSRSENGEYVIICLYVDDMLIFGTCNDIVFKT 982

Query: 925  KAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDS 746
            K +L S F+MKD+GEA VILG+K++R      LSQ  Y E++L +F   D   V TPYD+
Sbjct: 983  KLFLGSKFEMKDMGEASVILGVKIIRKGDSILLSQEKYTEKLLKKFGYYDFKSVSTPYDA 1042

Query: 745  SIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRL 566
            +  LKKN G+++SQ QYA+I+GS+++L + +RPDIAYAV RLSR T  PS++HW+AL RL
Sbjct: 1043 NSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAVGRLSRCTQCPSQDHWEALARL 1102

Query: 565  MKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTC 386
            MKYL+GT D  + YS FP V+EGY DANW+SD D+  STSG+VFTLGGGAV+W+S +QT 
Sbjct: 1103 MKYLRGTMDYAIEYSGFPAVLEGYSDANWISDSDETKSTSGYVFTLGGGAVTWRSARQTI 1162

Query: 385  IASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYNG 206
            IA STMESEF+ALE+A  EA+WL+  LA+IPLG +    +S+HCD QSAI++AKN  YNG
Sbjct: 1163 IARSTMESEFVALEMAGSEAEWLKNFLANIPLGMKPTPSVSMHCDCQSAIAIAKNKSYNG 1222

Query: 205  KKRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMKNL 35
            K RHI+++H  V+++++ G IS+D+V++ER+LADP TKPL ++ + E   G+G+K L
Sbjct: 1223 KNRHIQLRHNLVKQLLKSGTISIDYVKSERDLADPLTKPLGRKMILETSRGMGLKPL 1279


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  627 bits (1616), Expect = e-177
 Identities = 314/592 (53%), Positives = 422/592 (71%), Gaps = 12/592 (2%)
 Frame = -3

Query: 1774 ESMTSTSGNATVEQSGQSSQE-----IEIAVEPRRSKRQRTEKTYGTDFITA-----FVV 1625
            E++ S S +      G+S +E     IE  + PR+S+R R EK  G+D I +     ++V
Sbjct: 514  ENLLSDSNSQVPTSVGESLEETPSKVIEQPIVPRKSQRARKEKVLGSDEIDSQRISFYLV 573

Query: 1624 E--HPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTWDLVDLP 1451
            E    D+I    +    I EDP +Y+ AM+S D  FWKEAI  E+DSI SN TW+LVDLP
Sbjct: 574  EGNREDIIRKIPI-VLQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLP 632

Query: 1450 AHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARISTIRTLVA 1271
               KPI  KW+F++K   DG I  FKARLV  G  Q++ +D+FDTY+PVAR ++IR L A
Sbjct: 633  PGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRILFA 692

Query: 1270 LASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQ 1091
            LASIH+L VHQMDVKTAFLNGDL+EE+Y+ QPEG V+ G ENKVC+L +SLYGLKQAP Q
Sbjct: 693  LASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLPGNENKVCKLVKSLYGLKQAPKQ 752

Query: 1090 WYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVEIKAYLS 911
            W+EKF + IL +GF  N ++ CLY+KT     +++CLYVDDMLI    +  ++E K +LS
Sbjct: 753  WHEKFDHAILSBGFRHNNADKCLYSKTCBDYMIIVCLYVDDMLILSDDMRGIIETKRFLS 812

Query: 910  STFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLK 731
            STF MKDLGE D ILGIK+ R +GG+ L+Q+HYIE+V+++F+   +    TP+DSSI L+
Sbjct: 813  STFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHLKIKDANTPFDSSIKLE 872

Query: 730  KNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLK 551
            KNDG +V+Q +YA  +GS+MY   CTR DI++AVS+LSR+T  PS EHW A+ R++ YL+
Sbjct: 873  KNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFTSNPSVEHWKAIGRVLSYLR 932

Query: 550  GTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASST 371
             TK+L L YS+FP ++EGY DA+W+S   D  ST+G+VFTLGGGAVSW S KQTCI+ ST
Sbjct: 933  NTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFTLGGGAVSWGSKKQTCISHST 992

Query: 370  MESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYNGKKRHI 191
            ME+EFIAL     EA+WLR+L+ DIP    + + +S+HCDSQ+ ++ A + VYNGK RHI
Sbjct: 993  MEAEFIALAATRKEAEWLRDLMMDIPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHI 1052

Query: 190  RVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMKNL 35
             ++H  VR++I++G+IS+ FVR+  NLADPFTKPL +  V     G+G+K L
Sbjct: 1053 SIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLVRITSRGMGLKLL 1104


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  614 bits (1584), Expect = e-173
 Identities = 307/577 (53%), Positives = 412/577 (71%), Gaps = 12/577 (2%)
 Frame = -3

Query: 1774 ESMTSTSGNATVEQSGQSSQE-----IEIAVEPRRSKRQRTEKTYGTDFITA-----FVV 1625
            E++ S S +      G+S +E     +E  + PR+S+R R EK  G+D I +     ++V
Sbjct: 721  ENLLSDSNSQVPTSVGESQEETPSKVVEQPIVPRKSQRARKEKVLGSDEIDSQRISFYLV 780

Query: 1624 E--HPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTWDLVDLP 1451
            E    D+I    +    I EDP +Y+ AM+S D  FWKEAI  E+DSI SN TW+LVDLP
Sbjct: 781  EGNREDIIRKIPI-VLQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLP 839

Query: 1450 AHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARISTIRTLVA 1271
               KPI  KW+F++K   DG I  FKARLV  G  Q++ +D+FDTY+PVAR ++IR L A
Sbjct: 840  PGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRILFA 899

Query: 1270 LASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQ 1091
            LASIH+L VHQMDVKTAFLNGDL+EE+Y+ QPEG V+ G ENKVC+L +SLYGLKQAP Q
Sbjct: 900  LASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLLGNENKVCKLVKSLYGLKQAPKQ 959

Query: 1090 WYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVEIKAYLS 911
            W+EKF + IL +GF  N  + CLY+KT     V++CLYVDDMLI    +  ++E K +LS
Sbjct: 960  WHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLILSDDMXGIIETKRFLS 1019

Query: 910  STFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLK 731
             TF MKDL E D ILGIK+ R +GG+ L+Q+HYIE+V+++F+   +    TP+DSSI L+
Sbjct: 1020 XTFKMKDLXEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHLKIKDANTPFDSSIKLE 1079

Query: 730  KNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLK 551
            KN+G +V+Q +YA  +GS+MY   CTR DI++AVS+LSR+T  PS EHW A+ R++ YLK
Sbjct: 1080 KNBGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFTSNPSVEHWKAIGRVLGYLK 1139

Query: 550  GTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASST 371
             TK+L L YS+FP ++EGY DA+W+S   D  ST+G+VFTLGGGAVSW S KQTCI+ ST
Sbjct: 1140 NTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFTLGGGAVSWGSKKQTCISHST 1199

Query: 370  MESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYNGKKRHI 191
            ME+EFIAL     EA+WLR+L+ DIP    + + +S+HCDSQ+ ++ A + VYNGK RHI
Sbjct: 1200 MEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCDSQATLARAYSGVYNGKSRHI 1259

Query: 190  RVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVK 80
             ++H  VR++I++G+IS+ FVR+  NLADPFTKPL +
Sbjct: 1260 SIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTR 1296


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  606 bits (1563), Expect = e-171
 Identities = 301/597 (50%), Positives = 420/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+R+P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKLVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  606 bits (1562), Expect = e-170
 Identities = 299/603 (49%), Positives = 422/603 (69%), Gaps = 7/603 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G V+ G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT ++++ E
Sbjct: 944  KQAPKQWHEKFDKTLTFAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    NS  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMKNLY 32
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++ + 
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLRPIS 1303

Query: 31   GES 23
             ++
Sbjct: 1304 NDA 1306


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  605 bits (1559), Expect = e-170
 Identities = 299/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G V+ G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT ++++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    NS  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNNSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  604 bits (1558), Expect = e-170
 Identities = 301/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++  S Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPSEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEAI SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAICSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T++  GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLISAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L   Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGFHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  604 bits (1557), Expect = e-170
 Identities = 300/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  604 bits (1557), Expect = e-170
 Identities = 300/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 937  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 996

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 997  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 1039

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 1040 EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 1099

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 1100 IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 1159

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 1160 KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1219

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1220 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1279

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1280 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1339

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1340 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1399

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1400 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1459

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1460 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1516


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  604 bits (1557), Expect = e-170
 Identities = 300/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 810  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 869

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 870  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 912

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 913  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 972

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 973  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 1032

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 1033 KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1092

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1093 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1152

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1153 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1212

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1213 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1272

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1273 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1332

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1333 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1389


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  604 bits (1557), Expect = e-170
 Identities = 300/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  603 bits (1556), Expect = e-170
 Identities = 301/590 (51%), Positives = 410/590 (69%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVEPRRSKRQRTEKTYGTDFITAF 1631
            E +FP K      S    S +  + +S   ++E+E  VEPRRSKR RTEK++G DF+T  
Sbjct: 758  EDVFPCK------SKEEPSSSKRMLESQDQNEEVE--VEPRRSKRVRTEKSFGPDFLT-- 807

Query: 1630 VVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTWDLVDLP 1451
                           FM+  +P +++ A++S +   WKEAI+SEIDSI  NHTW+LVDLP
Sbjct: 808  ---------------FMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLP 852

Query: 1450 AHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARISTIRTLVA 1271
              CKP+ SKWIFK+K+K DGSID++KARLV+ G  Q + +D+FDTYSPV RI++IR ++A
Sbjct: 853  PGCKPLSSKWIFKRKMKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLA 912

Query: 1270 LASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQ 1091
            +A++ +L +HQMD+K          EIY+ QPEG    G E KVC+L +SLYGLKQAP Q
Sbjct: 913  IAALRNLEIHQMDMK----------EIYMEQPEGFSAPGQEKKVCKLVKSLYGLKQAPKQ 962

Query: 1090 WYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVEIKAYLS 911
            W+EKF N +L +GF +N  + C+Y K      V++CLYVDDMLI G+   ++   K  L+
Sbjct: 963  WHEKFDNVMLSHGFKINECDKCVYVKDTEHGYVIVCLYVDDMLIVGSDDKMITSTKNMLN 1022

Query: 910  STFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLK 731
            S FDMKD+G ADVILGIK+ RT+    LSQSHY++++L +F+  +    RTP D ++HL 
Sbjct: 1023 SRFDMKDMGLADVILGIKIKRTSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLS 1082

Query: 730  KNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLK 551
            KN G++VSQ +Y+RI+GS+MYL +CTRPDIAYAV +LSRYT  P  +HW  + R++KYL+
Sbjct: 1083 KNKGESVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLR 1142

Query: 550  GTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASST 371
             T+D  L Y+R+P V+EGY DANW+S+  D  S SG+VFTLGG AVSWKS KQT IA ST
Sbjct: 1143 FTRDYXLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARST 1202

Query: 370  MESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYNGKKRHI 191
            MESEFIAL+    EA+WLR  L DIP   +   PI +HCDSQSAI  A++++YNGK RHI
Sbjct: 1203 MESEFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAIGRAQSNMYNGKSRHI 1262

Query: 190  RVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
            R +H  +R+++  GVIS+D+V+++ N+ADP TK L +  VE+   G+ +K
Sbjct: 1263 RRRHNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVEKSSXGMXLK 1312


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  603 bits (1556), Expect = e-170
 Identities = 299/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G V+ G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score =  603 bits (1556), Expect = e-170
 Identities = 311/600 (51%), Positives = 420/600 (70%), Gaps = 10/600 (1%)
 Frame = -3

Query: 1810 EHIFPMK---TNVSVESMTSTSGNATV-----EQSGQSSQEIEIAVEPRRSKRQRTEKTY 1655
            E+ FPMK   ++ S E++ S     ++     E S     E +  +  R+SKRQR  K++
Sbjct: 695  ENEFPMKNTPSDTSHETIISHEHELSIPIDHAEDSHVHIPEEDDTIVTRKSKRQRVAKSF 754

Query: 1654 GTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNH 1475
            G DFI   V + P  I +                 A SS DA  WKEA++SE++SI SN 
Sbjct: 755  GNDFIVYLVEDTPTTISE-----------------AYSSPDADLWKEAVRSEMESIMSNG 797

Query: 1474 TWDLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARI 1295
            TW++VD P  C+PI  KWIFKKKL+PDG+I+R+KARLV  G +QK+  DFFDTYSPVAR+
Sbjct: 798  TWEVVDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSPVARL 857

Query: 1294 STIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLY 1115
            +TIRTL+A+A+ + L++HQMDVKTAFLNG+LDEEIY+ QPEG +  G ENKVCRL +SLY
Sbjct: 858  TTIRTLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLIKSLY 917

Query: 1114 GLKQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIV 935
            GLKQAP QW+EKF NT+   GFVVN S++C+Y +  G +SV++CLYVDD+LIFG+ L+++
Sbjct: 918  GLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVMLCLYVDDILIFGSNLNVI 977

Query: 934  VEIKAYLSSTFDMKDLGEADVILGIKLVR-TNGGFGLSQSHYIEQVLNRFNCSDLVPVRT 758
             E+K  LSS F+MKDLGEADVIL IKLVR  +GG  L QSHY+E+VL+RF  SD  P  T
Sbjct: 978  EEVKNLLSSNFEMKDLGEADVILNIKLVRKADGGVTLLQSHYVEKVLSRFGFSDCDPAPT 1037

Query: 757  PYDSSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDA 578
            PYD S+ L+KN   A  Q  Y++I+GS+MYL + TRPDI+YAVS+LSR+  KP  +HW A
Sbjct: 1038 PYDPSVLLRKNRRIARDQLTYSQIIGSLMYLASATRPDISYAVSKLSRFVSKPGDDHWCA 1097

Query: 577  LYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSG 398
            L R+++YLKGT    + Y+  P+V+EGYCDANW+SD D++ +TSG+VF  GGGAVSWKS 
Sbjct: 1098 LERVLRYLKGTMTYGIHYTGNPKVLEGYCDANWISDADELYATSGYVFLFGGGAVSWKSC 1157

Query: 397  KQTCIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNS 218
            KQT +  STME+E  AL+ A  EA+WLR+ L D+P+ ++    IS++CD+Q+ I+   +S
Sbjct: 1158 KQTILTKSTMEAELAALDTAGAEAEWLRDFLLDLPVVEKPIPAISMNCDNQTVITKVNSS 1217

Query: 217  VYNGKK-RHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
              N K  RH++ +   VR++   GVI++D+V T  NLAD FTK L +  +E     +GM+
Sbjct: 1218 RNNMKSTRHVKRRLKSVRKLKNSGVITVDYVHTSNNLADQFTKGLSRNVIESASREMGMR 1277


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  603 bits (1555), Expect = e-170
 Identities = 299/597 (50%), Positives = 419/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESM------TSTSGNATVEQSGQSSQEIEIAVEPRRSKRQRTEKTYGT 1649
            E  FPMK   S  +       +S +     E + +   E +++  PRRSKRQRT K++G 
Sbjct: 514  ESFFPMKDTHSGSNQPFEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 573

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 574  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 616

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 617  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 676

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 677  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 736

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 737  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 796

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 797  VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 856

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 857  PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 916

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 917  VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 976

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 977  ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1036

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  +      +G++
Sbjct: 1037 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVINNASKEMGLR 1093


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  603 bits (1554), Expect = e-169
 Identities = 299/597 (50%), Positives = 421/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATV------EQSGQSSQEIEIAVEPRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++      E + +   E +++  PRRSKRQRT K++G 
Sbjct: 693  ESFFPMKDTHSGSNQPSEIIPSSIIPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 752

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 753  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 795

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 796  EVTEQPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 855

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 856  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 915

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 916  KQAPKQWHEKFDKTLTSAGFGVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 975

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 976  VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1035

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1036 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1095

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1096 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1155

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1156 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1215

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1216 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1272


>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  602 bits (1553), Expect = e-169
 Identities = 299/597 (50%), Positives = 418/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N TW
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSPVAR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G + V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN   A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW  L R
Sbjct: 1064 PSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRVLER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 VMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  602 bits (1552), Expect = e-169
 Identities = 300/590 (50%), Positives = 415/590 (70%), Gaps = 1/590 (0%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVEPRRSKRQRTEKTYGTDFITAF 1631
            E IFPM+     + + +  G +       S  +    +E RRSKRQRTEK+ G       
Sbjct: 738  ESIFPMRD----KEVVAPDGPSRTYSLPSSVNDQTPDLELRRSKRQRTEKSLG------- 786

Query: 1630 VVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTWDLVDLP 1451
                    DDY++  +++ E+P S   A +S DA +W+EA+ SE+DSI SN TW++ DLP
Sbjct: 787  --------DDYII--YLVDEEPRSLTEAYTSPDAEYWREAVLSEMDSIISNGTWEITDLP 836

Query: 1450 AHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARISTIRTLVA 1271
            A CKP+  KWIF++K +PDG+I+++KARLV  G +QKK+ D+FDTYSPVAR+ TIR L+A
Sbjct: 837  AGCKPVGCKWIFRRKRRPDGTIEKYKARLVAKGFTQKKEEDYFDTYSPVARLPTIRVLLA 896

Query: 1270 LASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGLKQAPIQ 1091
            LA+ + L+VHQMDVKTAFLNG+L+EEIY+ QPEG VV G E+KVCRL +SLYGLKQAP Q
Sbjct: 897  LAAAYKLLVHQMDVKTAFLNGELEEEIYMQQPEGFVVKGQESKVCRLIKSLYGLKQAPRQ 956

Query: 1090 WYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVEIKAYLS 911
            W+EKF+NT+   GF VN ++ C+Y +  G   V++CLYVDD+LIFGT L+ ++E K +LS
Sbjct: 957  WHEKFNNTLTTAGFCVNEADKCVYYRFSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLS 1016

Query: 910  STFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYDSSIHLK 731
              FDMKDLGEADVIL IKL++   G  LSQSHY+E+V+ RF   D  PV TPYD S  L 
Sbjct: 1017 KNFDMKDLGEADVILNIKLIKGEDGITLSQSHYVEKVMTRFGHMDCKPVTTPYDPSYTLS 1076

Query: 730  KNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYRLMKYLK 551
            K +G+ V+Q  Y++I+GS+MYL++ TRPDI+YAV RL+RY+  P   HW ALYR+++YLK
Sbjct: 1077 KYEGEPVNQLLYSQIIGSLMYLSSATRPDISYAVCRLARYSASPGDRHWVALYRVLRYLK 1136

Query: 550  GTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQTCIASST 371
            G  +L + Y+ FP V+EG+ DANW+SD D + STSG+VFTL GGAVSW+S KQ+    ST
Sbjct: 1137 GAMNLGIKYTGFPSVLEGFSDANWISDSDQMKSTSGYVFTLAGGAVSWRSSKQSVSTRST 1196

Query: 370  MESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYNGK-KRH 194
             E+E +AL+ A+ EA+WLR+LL+D+P+  +    + ++CD+ S +    +   N K  RH
Sbjct: 1197 KEAELVALDSAALEAEWLRDLLSDLPMLAKPIPAVLVYCDNTSVLLKVNSRKDNQKSSRH 1256

Query: 193  IRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGM 44
            IR +    R   E GVI++D++++ERNLADPFTK L ++ ++    G+G+
Sbjct: 1257 IRRRLDSCRHARETGVITVDYIKSERNLADPFTKGLAQKPIQAACMGMGL 1306


>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  602 bits (1552), Expect = e-169
 Identities = 302/600 (50%), Positives = 419/600 (69%), Gaps = 10/600 (1%)
 Frame = -3

Query: 1810 EHIFPMK---TNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKT 1658
            EHIFPMK   +N    S      N  +E   Q     EI +E      P+RSKRQR EK+
Sbjct: 683  EHIFPMKDIHSNSRYSSEIIPEHNTPIESFEQPH---EIVLEEDDNDAPKRSKRQRVEKS 739

Query: 1657 YGTDFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSN 1478
            +G DFI                  +++ + P +   A +S DA  WKEA+ +E+DSI SN
Sbjct: 740  FGDDFIV-----------------YLVDDTPTTIAEAFASSDADDWKEAVHNEMDSILSN 782

Query: 1477 HTWDLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVAR 1298
             TW++ D P  CKP+  KW+FKKKLKPDG+I+++KARLV  G +QK+  DFFDTYSPVAR
Sbjct: 783  GTWEITDRPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVAR 842

Query: 1297 ISTIRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSL 1118
            ++TIR L++LA+ + L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E+KVC+L +SL
Sbjct: 843  MTTIRVLLSLAASYGLLVHQMDVKTAFLNGELDEEIYMEQPDGFVVKGQESKVCKLLKSL 902

Query: 1117 YGLKQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDI 938
            YGLKQAP QW+EKF  T+   GF +N ++ C+Y +  G + V++CLYVDD+LIFGT +D+
Sbjct: 903  YGLKQAPKQWHEKFDTTLTSAGFAINEADRCVYYRCGGGEGVILCLYVDDILIFGTNIDV 962

Query: 937  VVEIKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRT 758
            + E+K++LS +FDMKDLGEADVIL IKL++ +GG  LSQSHY+E+VL RF  S+  P  T
Sbjct: 963  INEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSHYVEKVLKRFGFSECKPSPT 1022

Query: 757  PYDSSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDA 578
            PYD S+ L+KN    + Q +Y++I+GS+MYL   TRPDI++AVS+LSR+   P  +HW A
Sbjct: 1023 PYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISFAVSKLSRFMSNPGTDHWHA 1082

Query: 577  LYRLMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSG 398
            L R+M+YL+GT    + YS    V+EGY D+NW+SD D++ +TSG+VFT+GGGAVSW+S 
Sbjct: 1083 LERVMRYLQGTMSYGIHYSGQHAVLEGYSDSNWISDADELYATSGYVFTIGGGAVSWRSC 1142

Query: 397  KQTCIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNS 218
            KQT +  STME+E  AL+ A+ EA+WLRELL D+P+ ++    I ++CD+Q+ I+   +S
Sbjct: 1143 KQTILTRSTMEAELAALDTATVEAEWLRELLMDLPVVEKPIPAILMNCDNQTVIAKVTSS 1202

Query: 217  VYNGK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
              NGK  RH++ +   VR++   GVIS+ ++ T++NLADPFTK L +  +E     +GM+
Sbjct: 1203 KDNGKSSRHVKRRLKSVRKLRNSGVISVTYISTDKNLADPFTKGLPRNVIEIASREMGMR 1262


>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
          Length = 1342

 Score =  601 bits (1550), Expect = e-169
 Identities = 298/597 (49%), Positives = 418/597 (70%), Gaps = 7/597 (1%)
 Frame = -3

Query: 1810 EHIFPMKTNVSVESMTSTSGNATVEQSGQSSQEIEIAVE------PRRSKRQRTEKTYGT 1649
            E  FPMK   S  +  S    +++    Q+    E+  E      PRRSKRQRT K++G 
Sbjct: 721  ESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGD 780

Query: 1648 DFITAFVVEHPDLIDDYVVSAFMICEDPVSYRAAMSSVDAPFWKEAIQSEIDSITSNHTW 1469
            DF                 + +++ + P S   A +S DA +WKEA++SE+DSI +N  W
Sbjct: 781  DF-----------------TVYLVDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGIW 823

Query: 1468 DLVDLPAHCKPIRSKWIFKKKLKPDGSIDRFKARLVVIGCSQKKDVDFFDTYSPVARIST 1289
            ++ + P  CKP+  KW+FKKKL+PDG+I+++KARLV  G +QK+  DFFDTYSP+AR++T
Sbjct: 824  EVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPIARLTT 883

Query: 1288 IRTLVALASIHSLVVHQMDVKTAFLNGDLDEEIYIHQPEGCVVSGMENKVCRLKRSLYGL 1109
            IR L++LA+ H L+VHQMDVKTAFLNG+LDEEIY+ QP+G VV G E KVC+L +SLYGL
Sbjct: 884  IRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGL 943

Query: 1108 KQAPIQWYEKFHNTILLNGFVVNGSESCLYAKTRGSDSVLICLYVDDMLIFGTCLDIVVE 929
            KQAP QW+EKF  T+   GF VN ++ C+Y +  G   V++CLYVDD+LIFGT L+++ E
Sbjct: 944  KQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGKGVILCLYVDDILIFGTNLEVINE 1003

Query: 928  IKAYLSSTFDMKDLGEADVILGIKLVRTNGGFGLSQSHYIEQVLNRFNCSDLVPVRTPYD 749
            +K++LS  FDMKDLG ADVIL IKL+R   G  L QSHY+E++LNRF   D  P  TPYD
Sbjct: 1004 VKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYD 1063

Query: 748  SSIHLKKNDGDAVSQEQYARILGSVMYLTNCTRPDIAYAVSRLSRYTHKPSKEHWDALYR 569
             S+ L+KN+  A +Q +Y++I+GS+MYL + TRPDI++AVS+LSR+T  P  +HW AL R
Sbjct: 1064 PSLLLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALER 1123

Query: 568  LMKYLKGTKDLCLLYSRFPEVMEGYCDANWVSDCDDVSSTSGFVFTLGGGAVSWKSGKQT 389
            +M+YLKGT +L L Y+ +P V+EGY D+NW+SD D++ +TSG+VFTLGGGAVSW+S KQT
Sbjct: 1124 IMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQT 1183

Query: 388  CIASSTMESEFIALELASHEAKWLRELLADIPLGKRSDAPISLHCDSQSAISVAKNSVYN 209
             +  STME+E  AL+ A+ EA+WLR+LL D+P+ ++    I ++CD+Q+ I    +S  N
Sbjct: 1184 ILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVIVKVNSSKDN 1243

Query: 208  GK-KRHIRVKHGKVREMIEDGVISLDFVRTERNLADPFTKPLVKRQVEELGAGIGMK 41
             K  RH++ +   VR++   GVI+LD+++T RNLADPFTK L +  ++     +G++
Sbjct: 1244 MKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNASKEMGLR 1300