BLASTX nr result
ID: Mentha26_contig00026611
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha26_contig00026611 (361 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l... 61 1e-07 ref|XP_002320019.2| FF domain-containing family protein [Populus... 57 3e-06 >ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca subsp. vesca] Length = 990 Score = 61.2 bits (147), Expect = 1e-07 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Frame = +2 Query: 2 RRSKDRGGGNRKAKDRRKINETDS---DGSDSYS-LEETXXXXXXXXXXXXXXXXXXXXX 169 R+ KDR K K+R K +ETDS D +DS+ E+ Sbjct: 862 RKEKDREREKEKGKERSKKDETDSETVDMTDSHDHKEDKKREKDKDRKHRKRHQSSIDDV 921 Query: 170 XXXXXEKERSRSHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVR 349 EKE S+ HR+ SD KKS+ K+ + E+D EN+ ++ K++H DGS RN E Sbjct: 922 GSDKEEKEDSKKHRHSSDRKKSR---KRAYTPESDSENRHRRHKKEHRDGSRRNGGYEEL 978 Query: 350 KIGE 361 + GE Sbjct: 979 EDGE 982 >ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa] gi|550323102|gb|EEE98334.2| FF domain-containing family protein [Populus trichocarpa] Length = 1019 Score = 57.0 bits (136), Expect = 3e-06 Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 5/124 (4%) Frame = +2 Query: 5 RSKDRGGGNRKAKDRRKINETDS---DGSDSYS-LEETXXXXXXXXXXXXXXXXXXXXXX 172 + K++ K K R K NETD D SD Y ++ Sbjct: 881 KEKEKEREREKGKQRTKKNETDGENVDASDGYGHKDDKKREKDKDRKHRKRHQSAIDDVN 940 Query: 173 XXXXEKERSR-SHRYISDSKKSKQVEKQLWNDEADMENQSKKQKRDHGDGSSRNNDNEVR 349 EKE S+ S ++ SD KKS+ K + E+D E+Q K+ KRDH DGS RN NE Sbjct: 941 SDKDEKEESKKSRKHSSDRKKSR---KHTYTPESDGESQHKRHKRDHRDGSRRNGSNEEL 997 Query: 350 KIGE 361 + GE Sbjct: 998 EDGE 1001