BLASTX nr result

ID: Mentha26_contig00026375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00026375
         (376 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21605.1| hypothetical protein MIMGU_mgv1a015248mg [Mimulus...    75   9e-12
ref|XP_006356193.1| PREDICTED: cytochrome c oxidase subunit 5b-1...    57   2e-06
gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum...    57   3e-06
ref|XP_004241710.1| PREDICTED: cytochrome c oxidase subunit 5b-2...    55   8e-06

>gb|EYU21605.1| hypothetical protein MIMGU_mgv1a015248mg [Mimulus guttatus]
           gi|604302020|gb|EYU21606.1| hypothetical protein
           MIMGU_mgv1a015248mg [Mimulus guttatus]
          Length = 163

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = -3

Query: 188 MFRRLAIQLRTLVPPRS---ASKTAVGASRQSENVIRSLPVYSRHFSTESGNVPKKVENV 18
           MFRRLAIQLRTL P RS   A++ AVG+    ENVIR  P++SRHF+ ESG V K+VE+V
Sbjct: 1   MFRRLAIQLRTLAPARSTRAAARFAVGSPIAPENVIRPFPIFSRHFAAESG-VTKRVEDV 59

Query: 17  MPIAT 3
           MPIAT
Sbjct: 60  MPIAT 64


>ref|XP_006356193.1| PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial-like
           [Solanum tuberosum]
          Length = 166

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
 Frame = -3

Query: 188 MFRRLAIQLRTLVPPRSASKT------AVGASRQSENVIRSLPVYSRHFSTESGNVPKKV 27
           M+RRL+ Q+RTL P RS +K+      A   S        ++P  SRHFST S NV KKV
Sbjct: 1   MWRRLSSQVRTLSPLRSTAKSNRLSAAATSLSSSPATFRPTVPFISRHFSTASANVVKKV 60

Query: 26  ENVMPIAT 3
           E+VMPIAT
Sbjct: 61  EDVMPIAT 68


>gb|ABB87114.1| cytochrome c oxidase family protein-like [Solanum tuberosum]
          Length = 167

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
 Frame = -3

Query: 188 MFRRLAIQLRTLVPPRSASKT------AVGASRQSENVIR-SLPVYSRHFSTESGNVPKK 30
           M+RRL+ Q+RTL P RS +K+      AV +   S    R ++P  SRHFST S NV KK
Sbjct: 1   MWRRLSSQVRTLSPLRSTAKSNRLSAAAVTSLSSSPATFRPTVPFISRHFSTASANVVKK 60

Query: 29  VENVMPIAT 3
           +E+VMPIAT
Sbjct: 61  IEDVMPIAT 69


>ref|XP_004241710.1| PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial-like
           [Solanum lycopersicum]
          Length = 165

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
 Frame = -3

Query: 188 MFRRLAIQLRTLVPPRSASKT----AVGASRQSENVIR-SLPVYSRHFSTESGNVPKKVE 24
           M+RRL+ Q+RTL P RS +K+    A      S    R ++P  +RHFST S NV KKVE
Sbjct: 1   MWRRLSSQVRTLSPLRSTAKSNRLSAAATLPSSPATFRPTVPFIARHFSTASANVVKKVE 60

Query: 23  NVMPIAT 3
           +VMPIAT
Sbjct: 61  DVMPIAT 67


Top