BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00026248
         (3155 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...  1656   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1528   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1428   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...  1426   0.0  
gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum...  1417   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1382   0.0  
ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1372   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...  1366   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1341   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...  1315   0.0  
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob...  1306   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...  1306   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...  1291   0.0  
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...  1288   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1276   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...  1266   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...  1265   0.0  
ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D sub...  1249   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1248   0.0  
gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bu...  1248   0.0  

>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 1656 bits (4288), Expect = 0.0
 Identities = 792/1011 (78%), Positives = 903/1011 (89%), Gaps = 2/1011 (0%)
 Frame = -2

Query: 3028 WDFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFLKAFCKK 2849
            WDFLEEAGPSS +  DKFS G+T+M               E D  +QE+ +GFLK  C+K
Sbjct: 4    WDFLEEAGPSSKN--DKFSNGTTQMDIDEDIEFDSSESEDELDTAMQELSEGFLKVSCRK 61

Query: 2848 ASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGEWRRATLKF 2669
            ASTAFF+QYGLISHQINS+NDFV+HGIQ++FDSIGE+V+EPGYDPSK+G+G+W+RA LKF
Sbjct: 62   ASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLKF 121

Query: 2668 GKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQVYTEGLSRS 2489
            GKVTLE PTFWTGEKFSS DGAKDYL+LLPRHA LQNMTY+++IKVETHLQVYT+GL+RS
Sbjct: 122  GKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNRS 181

Query: 2488 DKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQGGYFVIKGA 2309
            DKF TGV+  VEKT+LNEYH EVNFGRLP+MVKSDLCWM   +++DCEFDQGGYFVIKGA
Sbjct: 182  DKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGGYFVIKGA 241

Query: 2308 EKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEHLVAGEKILTAYFYV 2129
            EKTFIAQEQ+CLKRLWV K P+W+++YRPV++R RV+IK+VPK+EH++  +KILT YFYV
Sbjct: 242  EKTFIAQEQLCLKRLWVTKIPSWTVSYRPVARRNRVYIKLVPKMEHVIGADKILTVYFYV 301

Query: 2128 AEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDGFRKGGNAIKH 1949
             EI VW++FFALG+PND+EVVKLI LD E+ DIANIL+ SI+DADKK++GFRK GN+ KH
Sbjct: 302  TEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKKYEGFRKEGNSSKH 361

Query: 1948 IKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGRRKVDNRDD 1769
            IKELMQ C++PPTES+E+LI  YLFPHL +  QKA FL YMVKCLLEAY+GRRKV+NRDD
Sbjct: 362  IKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLEAYKGRRKVENRDD 421

Query: 1768 MRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDASIITNGLSR 1589
             RNK             RVHIKHAERRM KAMQRDLY+DREVQSID YLDASI+TNGLSR
Sbjct: 422  FRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQYLDASIVTNGLSR 481

Query: 1588 AFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDARYPHPSHW 1409
            AFSTGAW HPFKRMER +GVVA++RRTNPLQA+ D+R+TRQQVSYTGRVGDARYPHPSHW
Sbjct: 482  AFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHW 541

Query: 1408 GKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVDDTSCLLNGKH 1232
            GKVCFLSTPDGENCGLVKNLASLG+VSTN+L   NLLKKF + GME +VDDTS LL GKH
Sbjct: 542  GKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGMEKMVDDTSNLLGGKH 601

Query: 1231 RVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRPLF 1052
            +VFLDGDW+G+CKDSSSFV+KLRR+RR++E+P+Q+EIKRD+H+GEVRIF D+GRILRPL 
Sbjct: 602  KVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEVRIFNDSGRILRPLL 661

Query: 1051 VVQNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYSH 872
            VVQNLKKIKDLKG+FSFQSLL +GI+E IG EEEEDCQTAWG+ YLFTAELENPPVKY+H
Sbjct: 662  VVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAWGVRYLFTAELENPPVKYTH 721

Query: 871  CEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYYP 692
            CE DSSFLLGLS GI+PF NHDHARRVLYQS KHSQQAIGYSTTN  IRVDTNSH LYYP
Sbjct: 722  CELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNSIIRVDTNSHSLYYP 781

Query: 691  QRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRASL 512
            QR LFRT+LSD LG+S +SDH+KGM+PRP+F+NGQCAIVA+NVHLGYNQEDSLVMNR+SL
Sbjct: 782  QRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLGYNQEDSLVMNRSSL 841

Query: 511  ERGMFRTEHVRSYKAEVENSEG-AGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGAN 335
            ERGMFRTEHVRS+KA+VENSE   GK++K DE+VSFGK+QSKIGRVDSL+DDGFPYIGAN
Sbjct: 842  ERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRVDSLEDDGFPYIGAN 901

Query: 334  LQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLGDK 155
            LQTGDIVIGKHAA GVDHSIKLKHTE+GMV KVVLSANDEGKNFAVVSLRQVR+PCLGDK
Sbjct: 902  LQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAVVSLRQVRSPCLGDK 961

Query: 154  FSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLLEAA 2
            FSSMHGQKGVLGFLESQENFPF++ GIVPDIVINPHAFPSRQTPGQLLEAA
Sbjct: 962  FSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQLLEAA 1012


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1528 bits (3955), Expect = 0.0
 Identities = 739/1009 (73%), Positives = 867/1009 (85%), Gaps = 4/1009 (0%)
 Frame = -2

Query: 3016 EEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFLKAFCKKASTA 2837
            ++ GPS+S  +DK   G+T M               + D  +Q++D+G +K+FC+KA+T+
Sbjct: 2    DDVGPSTS--KDKLFNGNTFMDIDEDIDFDLSDSDDDIDNAMQDLDEGVVKSFCRKAATS 59

Query: 2836 FFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGD-GEWRRATLKFGKV 2660
            FFEQ+GLISHQ+NS+N+F++HGI QLF SIGE+++EPGYDPSKRGD GEW++A+LKFGKV
Sbjct: 60   FFEQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSKRGDDGEWQKASLKFGKV 119

Query: 2659 TLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV-YTEGLSRSDK 2483
             LE P+FWTGEKFSSA+GAKD L+L P+HA LQNMTY++RIKVETHL+V YTEGL RS+K
Sbjct: 120  NLERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKVETHLEVVYTEGLVRSEK 179

Query: 2482 FKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQGGYFVIKGAEK 2303
            F TGV T V++T L     E+NFG+LP+MV SDLCW+    ++DCEFDQGGYF+IKGAEK
Sbjct: 180  FTTGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKKDCEFDQGGYFIIKGAEK 239

Query: 2302 TFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEHLVAGEKILTAYFYVAE 2123
            TFIAQEQICLKRLWV+K+PTW+I+YRP++KR+R+++K+VPKVE    GEKILT YF   E
Sbjct: 240  TFIAQEQICLKRLWVSKDPTWTISYRPITKRRRIYLKLVPKVESAPVGEKILTVYFSFVE 299

Query: 2122 IPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDGFRKGGNAIKHIK 1943
            +P+W++FFALG  ND+EVVK+I +D E+  IANIL+ SIHDAD K++GFRK G+AIKH+K
Sbjct: 300  MPIWILFFALGARNDKEVVKMIDMDIEDSAIANILLASIHDADSKYEGFRKNGSAIKHLK 359

Query: 1942 ELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGRRKVDNRDDMR 1763
            +LMQ  +YPPTESVEE    +LFPHL S  QKA FLAYMVKCLLE Y+GRRKVDNRDD+R
Sbjct: 360  DLMQEGKYPPTESVEEYFQIHLFPHLKSSVQKACFLAYMVKCLLECYKGRRKVDNRDDLR 419

Query: 1762 NKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDASIITNGLSRAF 1583
            NK             R+ IKHAERRM+++MQRDL K R++Q+IDHYLDASIITNGLSRAF
Sbjct: 420  NKRLELAGELLERELRIQIKHAERRMMRSMQRDLDKGRDLQTIDHYLDASIITNGLSRAF 479

Query: 1582 STGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDARYPHPSHWGK 1403
            STGAW HP+KRMERI+G+VA+LRRTNPLQA+ D+R+TRQQVSYTGRVGDARYPHPSHWGK
Sbjct: 480  STGAWSHPYKRMERISGIVATLRRTNPLQAIADMRKTRQQVSYTGRVGDARYPHPSHWGK 539

Query: 1402 VCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVDDTSCLLNGKHRV 1226
            +CFLSTPDGENCGLVKNLASLG+VST +L+   LLKKF E GME L DDTS LL+GKH++
Sbjct: 540  ICFLSTPDGENCGLVKNLASLGLVSTEVLDQEGLLKKFRECGMEQLADDTSSLLDGKHKI 599

Query: 1225 FLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADAGRILRPLFVV 1046
            FLDGD VGVC+DSSSFV+ LRRRR+K EVP+Q+EIK D+ +GEVR+FADAGRILRPL VV
Sbjct: 600  FLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQVEIKMDQSNGEVRVFADAGRILRPLLVV 659

Query: 1045 QNLKKIKDLKGHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYSHCE 866
            +NL+KI DLK H  FQSLL  GIVE IGPEEEEDCQTAWG  YLF AELENPPVKYSHCE
Sbjct: 660  RNLRKINDLKSHVFFQSLLDVGIVELIGPEEEEDCQTAWGTKYLFMAELENPPVKYSHCE 719

Query: 865  FDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYYPQR 686
             DSSFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+STT+P+IRVDTNSHQLYYPQ+
Sbjct: 720  LDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTTSPNIRVDTNSHQLYYPQK 779

Query: 685  SLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRASLER 506
             LFRT+LSDCLGK   S   KG++P P FFNGQCAIVAVNVHLGYNQEDSLVMNRASLER
Sbjct: 780  PLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNGQCAIVAVNVHLGYNQEDSLVMNRASLER 839

Query: 505  GMFRTEHVRSYKAEVENSEGAG-KRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGANLQ 329
            GMFR+EHVRSYK++V+NSE A  K+ KAD+++SFGK+QSKIGRVDSLD+DGFPY+GANLQ
Sbjct: 840  GMFRSEHVRSYKSDVDNSEAAPVKKFKADDLISFGKVQSKIGRVDSLDEDGFPYVGANLQ 899

Query: 328  TGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRAPCLGDKFS 149
            TGDIVIGK  A GVDHSIKLKHTERGMVQKV+LSA+DEG+N+AVVSLRQVR+PCLGDKFS
Sbjct: 900  TGDIVIGKCTATGVDHSIKLKHTERGMVQKVILSADDEGRNYAVVSLRQVRSPCLGDKFS 959

Query: 148  SMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLLEAA 2
            SMHGQKGVLGFLESQENFPF + GIVPDIVINPHAFPSRQTPGQLLEAA
Sbjct: 960  SMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAA 1008


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1428 bits (3696), Expect = 0.0
 Identities = 702/1023 (68%), Positives = 834/1023 (81%), Gaps = 15/1023 (1%)
 Frame = -2

Query: 3025 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVD 2879
            D +EE G SS   ++K S GS RM               + D            +++E+ 
Sbjct: 5    DIMEEVGCSSG--KEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELG 62

Query: 2878 KGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGD 2699
            + +LK FCKKAST FFE+YGLISHQINS+NDF+++GIQ++FDS+GE+ +EPGYDPSKRGD
Sbjct: 63   ETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 122

Query: 2698 GEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHL 2519
            G+W+ A++KFGKVTLE P FW GEKFS ADG K+YLDLLPRHA LQNMTYS+RI VETH+
Sbjct: 123  GDWKHASVKFGKVTLERPKFWAGEKFS-ADGGKEYLDLLPRHARLQNMTYSARIMVETHV 181

Query: 2518 QVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFD 2339
            QVYT+ L RSDKFKTGVD  V+K    E   +V  GR+P+MV S+LCWM+  ++ DCEFD
Sbjct: 182  QVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFD 241

Query: 2338 QGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLV 2165
             GGYF++KGAEKTFIAQEQ+CLKRLWV+  PTW + YRP  KRKRV+IK+    K+EH+ 
Sbjct: 242  HGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIK 301

Query: 2164 AGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKF 1985
             GEK L+ Y  +AE+P+W++FFALGV +DREVV LI +D E+  I NILV SIH+ADK  
Sbjct: 302  GGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC 360

Query: 1984 DGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEA 1805
            + FRKG  A+ ++  L++ C++PP ESVEE I+ YLFP+L+   QKA FL YMVKCLL +
Sbjct: 361  EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS 420

Query: 1804 YRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHY 1625
            + GRRKVDNRDD RNK             R HIKHAERRMVKAMQRDLY DR+VQ I+HY
Sbjct: 421  FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY 480

Query: 1624 LDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGR 1445
            LDASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   D+R++RQQV+YTG+
Sbjct: 481  LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK 540

Query: 1444 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-L 1268
            VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+    L+     GM+ L
Sbjct: 541  VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKL 598

Query: 1267 VDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRI 1088
            VDD +  L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+  GEVRI
Sbjct: 599  VDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658

Query: 1087 FADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLF 911
            F+D+GRILRPL VV NLKKIK LKG  + FQSLL +GI+EFIGPEEEEDC+TAWG++Y+ 
Sbjct: 659  FSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGVEYIL 718

Query: 910  TAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPS 731
             A+ ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+
Sbjct: 719  KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778

Query: 730  IRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGY 551
             RVDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGY
Sbjct: 779  NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838

Query: 550  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDS 371
            NQEDSLVMNRASLERGMFR+EHVRSYKAEV+N E   K+LK ++ V+FGK QSKIGRVDS
Sbjct: 839  NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898

Query: 370  LDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVS 191
            LDDDGFP+IGANLQ+GDI+IGK A +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVS
Sbjct: 899  LDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958

Query: 190  LRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLL 11
            LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQLL
Sbjct: 959  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018

Query: 10   EAA 2
            EAA
Sbjct: 1019 EAA 1021


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 1426 bits (3692), Expect = 0.0
 Identities = 702/1023 (68%), Positives = 832/1023 (81%), Gaps = 15/1023 (1%)
 Frame = -2

Query: 3025 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVD 2879
            D +EE G SS   ++K S GSTRM               + D            +++E+ 
Sbjct: 5    DIMEEVGCSSG--KEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELG 62

Query: 2878 KGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGD 2699
            + FLK FCKKAST FFE+YGLISHQINS+NDF+++GIQ++FDS+GE+ +EPGYDPSKRGD
Sbjct: 63   ESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 122

Query: 2698 GEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHL 2519
            G+W+ A++KFGKVTLE P FW GEKFS  DG K+YLDLLPRHA LQNMTYS+RI VETH+
Sbjct: 123  GDWKHASVKFGKVTLERPKFWAGEKFS-VDGGKEYLDLLPRHARLQNMTYSARIMVETHV 181

Query: 2518 QVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFD 2339
            QVYT+ L RSDKFKTGVD  V+K    E   +V  GR+P+MV S+LCWM+  ++ DCEFD
Sbjct: 182  QVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCEFD 241

Query: 2338 QGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLV 2165
             GGYF++KGAEKTFIAQEQ+CLKRLWV+  PTW + YRP  KRKRV+IK+    K+EH+ 
Sbjct: 242  HGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIK 301

Query: 2164 AGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKF 1985
             GEK L+ Y  +AE+P+W++FFALGV +DREVV LI +D E+  I NILV SIH+ADK  
Sbjct: 302  GGEKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNC 360

Query: 1984 DGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEA 1805
            + FRKG  A+ ++  L++ C++PP ESVEE I+ YLFP+L+   QKA FL YMVKCLL +
Sbjct: 361  EDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHS 420

Query: 1804 YRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHY 1625
            + GRRKVDNRDD RNK             R HIKHAERRMVKAMQRDLY DR+VQ I+HY
Sbjct: 421  FIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHY 480

Query: 1624 LDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGR 1445
            LDASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   D+R++RQQV+YTG+
Sbjct: 481  LDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGK 540

Query: 1444 VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-L 1268
            VGDARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+    L+     GM+ L
Sbjct: 541  VGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKL 598

Query: 1267 VDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRI 1088
            VDD S  L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+  GEVRI
Sbjct: 599  VDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRI 658

Query: 1087 FADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLF 911
            F+D GRILRPL VV NLKKIK LKG  + FQSLL +GI+E IGPEEEEDC+TAWG++Y+ 
Sbjct: 659  FSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYIL 718

Query: 910  TAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPS 731
             A+ ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+
Sbjct: 719  KADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPN 778

Query: 730  IRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGY 551
             RVDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGY
Sbjct: 779  NRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGY 838

Query: 550  NQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDS 371
            NQEDSLVMNRASLERGMFR+EHVRSYKAEV+N E   K+LK ++ V+FGK QSKIGRVDS
Sbjct: 839  NQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDS 898

Query: 370  LDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVS 191
            LDDDGFP+IGANLQ+GDI+IGK + +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVS
Sbjct: 899  LDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVS 958

Query: 190  LRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLL 11
            LRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQLL
Sbjct: 959  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLL 1018

Query: 10   EAA 2
            EAA
Sbjct: 1019 EAA 1021


>gb|AAY68206.1| RNA polymerase IV second largest subunit [Solanum lycopersicum]
          Length = 1123

 Score = 1417 bits (3669), Expect = 0.0
 Identities = 699/1021 (68%), Positives = 828/1021 (81%), Gaps = 15/1021 (1%)
 Frame = -2

Query: 3019 LEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-----------CVLQEVDKG 2873
            +EE G SS   ++K S GSTRM               + D            +++E+ + 
Sbjct: 1    MEEVGCSSG--KEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 58

Query: 2872 FLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGE 2693
            FLK FCKKAST FFE+YG ISHQINS+NDF+++GIQ++FDS+GE+ +EPGYDPSKRGDG+
Sbjct: 59   FLKNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 118

Query: 2692 WRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 2513
            W+ A++KFGKVTLE P FW GEKFS   G K+YLDLLPRHA LQNMTYS+RI VETH+QV
Sbjct: 119  WKHASVKFGKVTLERPKFWAGEKFS-VGGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 177

Query: 2512 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQG 2333
            YT+ L RSDKFKTGVD  V+K    E   +V  GR+P+MV S+LCWM+  ++ DCEFD G
Sbjct: 178  YTKKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCWMNGVDKLDCEFDHG 237

Query: 2332 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLVAG 2159
            GYF+ KGAEKTFIAQEQ+CLKRLWV+  PTW + YRP  KRKRV+IK+    K+EH+  G
Sbjct: 238  GYFIAKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGEKRKRVYIKLTETLKLEHIKGG 297

Query: 2158 EKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDG 1979
            EK L+ Y  +AE+P+W++FFALGV +DREVV LI +D E+  I NILV SIH+ADK  + 
Sbjct: 298  EKALSVYI-LAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIHEADKNCED 356

Query: 1978 FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYR 1799
            FRKG  A+ ++  L++ C++PP ESVEE I+ YLFP+L+   QKA FL YMVKCLL ++ 
Sbjct: 357  FRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMVKCLLHSFI 416

Query: 1798 GRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLD 1619
            GRRKVDNRDD RNK             R HIKHAERRMVKAMQRDLY DR+VQ I+HYLD
Sbjct: 417  GRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQVQPIEHYLD 476

Query: 1618 ASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVG 1439
            ASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   D+R++RQQV+YTG+VG
Sbjct: 477  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQVTYTGKVG 536

Query: 1438 DARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVD 1262
            DARYPHPSHWGK+CFLSTPDGENCGLVKNLAS+G+VST IL+    L+     GM+ LVD
Sbjct: 537  DARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKP--FLETLFRCGMQKLVD 594

Query: 1261 DTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFA 1082
            D S  L+GK +V LDG+WVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+  GEVRIF+
Sbjct: 595  DCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQGEVRIFS 654

Query: 1081 DAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTA 905
            D GRILRPL VV NLKKIK LKG  + FQSLL +GI+E IGPEEEEDC+TAWG++Y+  A
Sbjct: 655  DPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGVEYILKA 714

Query: 904  ELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIR 725
            + ENPP KY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIG+ST NP+ R
Sbjct: 715  DKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFSTVNPNNR 774

Query: 724  VDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQ 545
            VDTN+HQLYYPQR LFRTML+D LGK + + + KGM+PRP++FNGQCAIVAVNVHLGYNQ
Sbjct: 775  VDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVNVHLGYNQ 834

Query: 544  EDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLD 365
            EDSLVMNRASLERGMFR+EHVRSYKAEV+N E   K+LK ++ V+FGK QSKIGRVDSLD
Sbjct: 835  EDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIGRVDSLD 894

Query: 364  DDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLR 185
            DDGFP+IGANLQ+GDI+IGK + +G DHS+KLKHTERGMVQKV+LSANDEGKNFAVVSLR
Sbjct: 895  DDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKNFAVVSLR 954

Query: 184  QVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLLEA 5
            QVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQTPGQLLEA
Sbjct: 955  QVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEA 1014

Query: 4    A 2
            A
Sbjct: 1015 A 1015


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1382 bits (3576), Expect = 0.0
 Identities = 679/1025 (66%), Positives = 819/1025 (79%), Gaps = 17/1025 (1%)
 Frame = -2

Query: 3025 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD---------CVLQEVDKG 2873
            D +E+ G SS   + K S GST M               + D           ++E+  G
Sbjct: 5    DIMEDVGCSSG--KAKTSNGSTMMDFDIDGLFEVEDYDWDEDEDEDDNLDMTSIKELGGG 62

Query: 2872 FLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGE 2693
            FL+ FCKKAS  FFE+YG+ISHQI+S+NDF+ +GIQ++FDS+GE+ +EPGYDPSK+G+GE
Sbjct: 63   FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 2692 WRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 2513
            W+ A++KFGKVTL+ P FW GEKFS+ +G ++YLDL PRHA LQNMTYS+RI VETH+QV
Sbjct: 123  WKHASVKFGKVTLDRPKFWAGEKFSAYNG-EEYLDLWPRHARLQNMTYSARIIVETHVQV 181

Query: 2512 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQG 2333
            +T+ L RSDKFKTGV+  V+K  + E   +V  GR+P+MV S+LCWMS  +  DC+FD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHG 241

Query: 2332 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLVAG 2159
            GYF++KGAEK FIAQEQICLKRLWV+   TW +AYR   KR RV++K+    K EH+   
Sbjct: 242  GYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGE 301

Query: 2158 EKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDG 1979
             K L+ YF +AE+P+W++FFALGV +DRE+V LI +D ++ +I NILV SIHDADK  + 
Sbjct: 302  AKALSVYF-LAEMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDADKNCED 360

Query: 1978 FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYR 1799
            FRKG  A+ ++  L++ C++PP ESVEE I  YLFP+L+   QKA FL YMVKCLL +Y 
Sbjct: 361  FRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYI 420

Query: 1798 GRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLD 1619
            GRRKVDNRDD RNK             R HIKHAERRMVKA+QRDL  DR+VQ ++HYLD
Sbjct: 421  GRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPLEHYLD 480

Query: 1618 ASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVG 1439
            ASIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   DLR+TRQQV+YTG+VG
Sbjct: 481  ASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVG 540

Query: 1438 DARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVD 1262
            DARYPHPSHWGKVCFLSTPDGENCGLVKNLAS+G+VST +L+   LL+     GM+ LVD
Sbjct: 541  DARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKP--LLETLFRCGMQKLVD 598

Query: 1261 DTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFA 1082
            D++  L+GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+   EVRIF+
Sbjct: 599  DSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFS 658

Query: 1081 DAGRILRPLFVVQNLKKIKDLK-----GHFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDY 917
            DAGRI+RPL VV NLK IK LK     G + FQ+LL  GI+E IGPEEEEDC+TAWG++Y
Sbjct: 659  DAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEY 718

Query: 916  LFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTN 737
            L  A+ ENPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST N
Sbjct: 719  LLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVN 778

Query: 736  PSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHL 557
            P+ RVDTN+HQLYYPQR LF TMLSD LGK +   H KGM+ RP+++NGQCAIVAVNVHL
Sbjct: 779  PNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAVNVHL 838

Query: 556  GYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRV 377
            GYNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N E  GK+ K ++ V+FGK QSKIGRV
Sbjct: 839  GYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQSKIGRV 898

Query: 376  DSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAV 197
            DSLDDDGFP+IGANLQ+GDI+IGK+A +G DHS+K+KHTERGMVQKV+LSAND+GKNFAV
Sbjct: 899  DSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDGKNFAV 958

Query: 196  VSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQ 17
            VSLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPF   GIVPDIVINPHAFPSRQTPGQ
Sbjct: 959  VSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQ 1018

Query: 16   LLEAA 2
            LLEAA
Sbjct: 1019 LLEAA 1023


>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1372 bits (3551), Expect = 0.0
 Identities = 675/972 (69%), Positives = 801/972 (82%), Gaps = 8/972 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            + +++K +LK FCKK + +FF +YGLI HQINSFNDF+ +GIQ++FDS GE+ +EPGYDP
Sbjct: 38   IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 97

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SKRG+G+WR A+++FGKVTLE P  W GE    +DG K+ L+ LPRHA LQNMTYSSR+K
Sbjct: 98   SKRGEGDWRYASVRFGKVTLERPRVWAGE----SDG-KESLNFLPRHARLQNMTYSSRMK 152

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDT-VVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEE 2357
             + H QVYT+ L RSDK+KTG D   VEK ++ E + ++  GR+P+MVKS+LCWM+  E 
Sbjct: 153  AQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVER 212

Query: 2356 RDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP-K 2180
             DCE+D GGYF+IKGAEKTFIAQEQICLKRLWV+  PTW +AYRP+ KRKRV++K+ P K
Sbjct: 213  GDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPK 272

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
             E+   GEK+LT YF   EIP+W++FFALG  +D+EVV LI  + ++  I+NILV SIH+
Sbjct: 273  DENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHE 332

Query: 1999 ADKKFDG----FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 1832
            AD++ +     FR+ GNAI  + +L++ C++PP ES++E IS YLFP+ +   QKA FL 
Sbjct: 333  ADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLG 392

Query: 1831 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 1652
            YMVKCLL+AY GRRK DNRDD RNK             RVHI+HAERRMVKAMQR+LY D
Sbjct: 393  YMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGD 452

Query: 1651 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 1472
            R+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVA+LRRTNPLQ   D+R+T
Sbjct: 453  RDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKT 512

Query: 1471 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKK 1292
            RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  G+VST +L+   L+ K
Sbjct: 513  RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDP--LVDK 570

Query: 1291 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1115
              + GME LVDDTS  L+GK++VFLDGDWVGVC+D  SFV +LR +RR  E+P Q+EIKR
Sbjct: 571  LFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKR 630

Query: 1114 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQ 938
            D+  GEVRIF+DAGRILRPL VV+NLKK+K  KG  F+FQSLL  GIVE IG EEEEDC 
Sbjct: 631  DEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCS 690

Query: 937  TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 758
            TAWGI YL     ++PPVKY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQA
Sbjct: 691  TAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQA 749

Query: 757  IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 578
            IG+STTNP+IRVDT SHQLYYPQR LFRTM+SDCLGK  YS+ HKG+VPRP++FNGQ AI
Sbjct: 750  IGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVPRPEYFNGQIAI 809

Query: 577  VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 398
            VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYK+EV+N+E   K+ K+++ V FGK+
Sbjct: 810  VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKM 869

Query: 397  QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 218
            QSKIGRVDSLDDDGFP+IGANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND
Sbjct: 870  QSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSAND 929

Query: 217  EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 38
            +GKNFAVVSLRQVR PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFP
Sbjct: 930  DGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 989

Query: 37   SRQTPGQLLEAA 2
            SRQTPGQLLEAA
Sbjct: 990  SRQTPGQLLEAA 1001


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 1366 bits (3536), Expect = 0.0
 Identities = 671/1024 (65%), Positives = 814/1024 (79%), Gaps = 16/1024 (1%)
 Frame = -2

Query: 3025 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD---------CVLQEVDKG 2873
            D +E+ G SS   + K S GST M               + D           ++E+  G
Sbjct: 5    DIMEDVGCSSG--KGKTSNGSTMMDFDIDGLFEVGDYDWDDDEDEDDNLDMASIKELGGG 62

Query: 2872 FLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGE 2693
            FL+ FCKKAS  FFE+YGLISHQI+S+NDF+ +GIQ++FDS+GE+ +EPGYDPSK+G+GE
Sbjct: 63   FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 2692 WRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQV 2513
            W+ A++KFG V L+ P FW GEK+S+ +G ++YL++ PRHA LQNMTYS+RI VETH+QV
Sbjct: 123  WKHASVKFGNVILDRPKFWAGEKYSAYNG-EEYLNMWPRHARLQNMTYSARIIVETHVQV 181

Query: 2512 YTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQG 2333
            +T+ L RSDKFKTGV+  V+K  + E   +V  GR+P+MV S+LCWMS  +  DCEFD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 241

Query: 2332 GYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPKVEH-LVAGE 2156
            GYF++KGAEK FIAQEQ+CLKRLWV+   TW +AYR   KR RV++K+   ++H  + GE
Sbjct: 242  GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGEKRNRVYLKLTETLKHEQIKGE 301

Query: 2155 KILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDGF 1976
                + +++AE+P+W++FFALGV +DREVV LI +D +++ I NILV SIHDADK  + F
Sbjct: 302  AKSLSVYFLAEMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADKNCEDF 361

Query: 1975 RKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRG 1796
            RKG  A+ ++  L++ C++PP ESVEE I  YLFP+L+   QKA FL YMVKCLL +Y G
Sbjct: 362  RKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIG 421

Query: 1795 RRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDA 1616
            RRKVDNRDD RNK             RVHIKHAERRMVKA+QRDL  DR+V  I+HYLDA
Sbjct: 422  RRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIEHYLDA 481

Query: 1615 SIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGD 1436
            SIITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   DLR+TRQQV+YTG+VGD
Sbjct: 482  SIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGD 541

Query: 1435 ARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVDD 1259
            ARYP+PSHWGKVCFLSTPDGENCGLVKNLAS+G+VST +L    LL+     GM+ LVDD
Sbjct: 542  ARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVL--MPLLETLFRCGMQKLVDD 599

Query: 1258 TSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFAD 1079
             +  L+GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q+E+KRD+   EVRIF+D
Sbjct: 600  CATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVRIFSD 659

Query: 1078 AGRILRPLFVVQNLKKIKDLKG-----HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYL 914
            AGRI+RPL VV NLK IK L G      + FQ+LL  GI+E IGPEEEEDC+TAWG++YL
Sbjct: 660  AGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWGVEYL 719

Query: 913  FTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNP 734
              A+ ENPPV Y+HCE D SFLLGLS G+IPFANHDHARRVLYQS KHSQQAIG+ST NP
Sbjct: 720  LKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFSTVNP 779

Query: 733  SIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLG 554
            +IRVDTN+HQLYYPQR LF TMLSD LGK + + H +GM+ RP+++NGQCAIVAVNVHLG
Sbjct: 780  NIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVNVHLG 839

Query: 553  YNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVD 374
            YNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N E  GK+ KA++ V+FGK QSKIGRVD
Sbjct: 840  YNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEATGKKSKAEDSVNFGKTQSKIGRVD 899

Query: 373  SLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVV 194
             LDDDG PYIGANLQ+GDI+IGK A +G DHS+K+KHTE+GMVQKV+LSANDEGKNFAVV
Sbjct: 900  CLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGKNFAVV 959

Query: 193  SLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQL 14
            SLRQVR+PCLGDKFSSMHGQKGVLG+LESQENFPF   GIVPDIVINPHAFPSRQTPGQL
Sbjct: 960  SLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQL 1019

Query: 13   LEAA 2
            LEAA
Sbjct: 1020 LEAA 1023


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1341 bits (3471), Expect = 0.0
 Identities = 665/972 (68%), Positives = 790/972 (81%), Gaps = 8/972 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            + +++K +LK FCKK + +FF +YGLI HQINSFNDF+ +GIQ++FDS GE+ +EPGYDP
Sbjct: 74   IDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIKNGIQRVFDSFGEIPVEPGYDP 133

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SKRG+G+WR A+++FGKVTLE P  W GE    +DG K+ L+ LPRHA LQNMTYSSR+K
Sbjct: 134  SKRGEGDWRYASVRFGKVTLERPRVWAGE----SDG-KESLNFLPRHARLQNMTYSSRMK 188

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDT-VVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEE 2357
             + H QVYT+ L RSDK+KTG D   VEK ++ E + ++  GR+P+MVKS+LCWM+  E 
Sbjct: 189  AQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDILIGRIPVMVKSELCWMNGVER 248

Query: 2356 RDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP-K 2180
             DCE+D GGYF+IKGAEKTFIAQEQICLKRLWV+  PTW +AYRP+ KRKRV++K+ P K
Sbjct: 249  GDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTWMVAYRPIWKRKRVYVKLEPPK 308

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
             E+   GEK+LT YF   EIP+W++FFALG  +D+EVV LI  + ++  I+NILV SIH+
Sbjct: 309  DENNRGGEKVLTVYFSSTEIPIWILFFALGASSDKEVVDLIDFNIDDAGISNILVASIHE 368

Query: 1999 ADKKFDG----FRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 1832
            AD++ +     FR+ GNAI  + +L++ C++PP ES++E IS YLFP+ +   QKA FL 
Sbjct: 369  ADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPGESIQECISKYLFPNFSGVKQKARFLG 428

Query: 1831 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 1652
            YMVKCLL+AY GRRK DNRDD RNK             RVHI+HAERRMVKAMQR+LY D
Sbjct: 429  YMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAERRMVKAMQRELYGD 488

Query: 1651 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 1472
            R+++ I++YLDASIITNGLSRAFSTG W HPFKRMERI+GVVA+LRRTNPLQ   D+R+T
Sbjct: 489  RDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRRTNPLQMTADMRKT 548

Query: 1471 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKK 1292
            RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA  G+VST +L+   L+ K
Sbjct: 549  RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLVSTEVLDP--LVDK 606

Query: 1291 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1115
              + GME LVDDTS  L+GK++VFLDGDWVGVC+D  SFV +LR +RR  E+P Q+EIKR
Sbjct: 607  LFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRHKELPQQVEIKR 666

Query: 1114 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQ 938
            D+  GEVRIF+DAGRILRPL VV+NLKK+K  KG  F+FQSLL  GIVE IG EEEEDC 
Sbjct: 667  DEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCS 726

Query: 937  TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 758
            TAWGI YL     ++PPVKY+HCE D SFLLGLS GIIP+ANHDHARRVLYQS KHSQQA
Sbjct: 727  TAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQA 785

Query: 757  IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 578
            IG+STTNP+IRVDT SHQLYYPQR LFRTM+SD              +PRP++FNGQ AI
Sbjct: 786  IGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD--------------LPRPEYFNGQIAI 831

Query: 577  VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 398
            VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYK+EV+N+E   K+ K+++ V FGK+
Sbjct: 832  VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKM 891

Query: 397  QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 218
            QSKIGRVDSLDDDGFP+IGANLQ GDIVIG+ A +GVDHSIKLKHTERGMVQKVV+SAND
Sbjct: 892  QSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSAND 951

Query: 217  EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 38
            +GKNFAVVSLRQVR PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFP
Sbjct: 952  DGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 1011

Query: 37   SRQTPGQLLEAA 2
            SRQTPGQLLEAA
Sbjct: 1012 SRQTPGQLLEAA 1023


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score = 1315 bits (3403), Expect = 0.0
 Identities = 640/968 (66%), Positives = 776/968 (80%), Gaps = 4/968 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            L+++ + FLK FC+KA+ +FF +YGL+SHQINS+N+F+ +G+Q+ FDS GE ++EPGYDP
Sbjct: 39   LRDLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDP 98

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+G+GEWR A+++FG+VTL+ P+F+ G          D  D+ PRHA LQNMTYSSR+K
Sbjct: 99   SKKGEGEWRYASMRFGQVTLDKPSFFAGN-------GGDEHDMFPRHARLQNMTYSSRMK 151

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            V+   QVYT+    SDKFKTG +  ++K +L++  T++  GR+P+MVKSDLCWM   E+ 
Sbjct: 152  VKVQFQVYTQKRVTSDKFKTGREQYIQKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKG 211

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2180
            DC+FD GGYF+IKGAEK F+AQEQICLKRLWV+    W++AY+  +KR R+ +++V   K
Sbjct: 212  DCDFDHGGYFIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSK 271

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
             E +  GEK+L+ YF   EIP+W++FFALGV +D+E+V LI    E+  I NIL  SIHD
Sbjct: 272  FEDIKGGEKVLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHD 331

Query: 1999 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 1820
            AD K D FRKG NA+K++ +L++G  +PP ES EE ++TYLFP L    QKA FL YMVK
Sbjct: 332  ADNKCDEFRKGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVK 391

Query: 1819 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 1640
            CLL+AY GRRK DNRDD RNK             +VHI HA +RM KA+QRDLY DR V+
Sbjct: 392  CLLQAYSGRRKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVR 451

Query: 1639 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 1460
             I++YLDASI+TNGLSRAFSTGAW HPFKR ERI+G+VA+L R NPLQ + DLRRTRQQV
Sbjct: 452  PIEYYLDASILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQV 511

Query: 1459 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHES 1280
             YTG+VGDARYPHPSHWGK+CFLSTPDGENCGLVKNL   G+VST+ILE   + ++   S
Sbjct: 512  QYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILE--PIFEQLFNS 569

Query: 1279 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1103
            GME L DD S  L GK +VF+DGDW+GVCKDS SFV++LRR+RR+ E+P Q+EIKRD+  
Sbjct: 570  GMEKLADDASYSLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQ 629

Query: 1102 GEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWG 926
             EVRIF DAGRILRPL VV+N+ KIK L+G +++FQ+LL  GI+E +G EEEEDC TAWG
Sbjct: 630  SEVRIFMDAGRILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWG 689

Query: 925  IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 746
            I YL     +  P+K++HCE D SFLLGLS GIIPFANHDHARRVLYQS KHS QAIG+ 
Sbjct: 690  IKYLLKDIEDKKPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFP 749

Query: 745  TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 566
            TTNPSIRVDT SHQL+YPQR LFRTM+SDCLGK  Y  +H  ++PRP+ +NGQ AIVAVN
Sbjct: 750  TTNPSIRVDTLSHQLFYPQRPLFRTMISDCLGKPGYGHNH--ILPRPELYNGQNAIVAVN 807

Query: 565  VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 386
            VHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E   KR  +D++V+FGKIQSKI
Sbjct: 808  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKEMQVKRRSSDDMVNFGKIQSKI 867

Query: 385  GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 206
            GRVDSLDDDGFP+IGANLQ GDIVIGK+A +G DHSIKLKHTERGMVQKVVLS+ND+GKN
Sbjct: 868  GRVDSLDDDGFPFIGANLQCGDIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKN 927

Query: 205  FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 26
            F+VVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQT
Sbjct: 928  FSVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 987

Query: 25   PGQLLEAA 2
            PGQLLEAA
Sbjct: 988  PGQLLEAA 995


>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1073

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 642/968 (66%), Positives = 775/968 (80%), Gaps = 4/968 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            +Q++ + FL+ FCK+A+ +FF++YGLISHQ+NS+N F+ +G+Q  FDS GE +I  GYDP
Sbjct: 29   VQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDP 88

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+G+G+WR A ++FGKVT+E PTFW       A    + L++LPRHA LQNMTYSSR+K
Sbjct: 89   SKKGEGDWRHARVRFGKVTVERPTFW-------AVSGGNELNMLPRHARLQNMTYSSRMK 141

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            V   LQVYT    +SDKFKTG +  VE+ ++ + + ++  GR+P+MV+SDLCWM++ E+ 
Sbjct: 142  VNVDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKA 201

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2180
            DC+FD GGYF+IKG EK FIAQEQI +KRLW++    W+IAYR   KR R+ I++V   K
Sbjct: 202  DCDFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSK 261

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
            VE++  GEK+LT YF   EIPVW++FFALGV +D+EVV LI  +  +  I NIL  SI +
Sbjct: 262  VEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRN 321

Query: 1999 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 1820
            AD K   F +G NAI ++ +L++  R+PP E +EE +STYLFP L S  QKA FL YMVK
Sbjct: 322  ADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVK 381

Query: 1819 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 1640
            CLL+AY GR K DNRDD RNK             +VHI HA RRM K +QRDLY DR V+
Sbjct: 382  CLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVR 441

Query: 1639 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 1460
             I+HYLDASI+TNGLSRAFSTGAW HP+KRMERI+GVVA+L R NPLQ + DLR+TRQQV
Sbjct: 442  PIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQV 501

Query: 1459 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHES 1280
             YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VSTNI+E  +++ K  +S
Sbjct: 502  QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIME--SIVDKLFDS 559

Query: 1279 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1103
            GME LV+DT   L+GK +VFL+G+WVGVC+DS SF A++RR+RR  E P+Q+EIKRD+H 
Sbjct: 560  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619

Query: 1102 GEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWG 926
            GEVRIF+D GRILRPL VV NL +IK  KG +++FQ+LL  GI+E +G EEEEDC+TAW 
Sbjct: 620  GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679

Query: 925  IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 746
            I YL T      PVKY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+S
Sbjct: 680  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739

Query: 745  TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 566
            TTNP+IRVDT SHQLYYPQR LFRTM SDCLGK  +    KG++P+P+ +NGQ AIVAVN
Sbjct: 740  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799

Query: 565  VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 386
            VHLGYNQEDSLVMNR+SLERGMFR+EHVRSYKAEV+N E   KR K+++IV+FGKIQSKI
Sbjct: 800  VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKI 859

Query: 385  GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 206
            GRVDSLDDDGFPY+GANLQ GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+ND+GKN
Sbjct: 860  GRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKN 919

Query: 205  FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 26
            +AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQT
Sbjct: 920  YAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQT 979

Query: 25   PGQLLEAA 2
            PGQLLEAA
Sbjct: 980  PGQLLEAA 987


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 1306 bits (3380), Expect = 0.0
 Identities = 642/968 (66%), Positives = 775/968 (80%), Gaps = 4/968 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            +Q++ + FL+ FCK+A+ +FF++YGLISHQ+NS+N F+ +G+Q  FDS GE +I  GYDP
Sbjct: 29   VQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDP 88

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+G+G+WR A ++FGKVT+E PTFW       A    + L++LPRHA LQNMTYSSR+K
Sbjct: 89   SKKGEGDWRHARVRFGKVTVERPTFW-------AVSGGNELNMLPRHARLQNMTYSSRMK 141

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            V   LQVYT    +SDKFKTG +  VE+ ++ + + ++  GR+P+MV+SDLCWM++ E+ 
Sbjct: 142  VNVDLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKA 201

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2180
            DC+FD GGYF+IKG EK FIAQEQI +KRLW++    W+IAYR   KR R+ I++V   K
Sbjct: 202  DCDFDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSK 261

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
            VE++  GEK+LT YF   EIPVW++FFALGV +D+EVV LI  +  +  I NIL  SI +
Sbjct: 262  VEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRN 321

Query: 1999 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 1820
            AD K   F +G NAI ++ +L++  R+PP E +EE +STYLFP L S  QKA FL YMVK
Sbjct: 322  ADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVK 381

Query: 1819 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 1640
            CLL+AY GR K DNRDD RNK             +VHI HA RRM K +QRDLY DR V+
Sbjct: 382  CLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVR 441

Query: 1639 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 1460
             I+HYLDASI+TNGLSRAFSTGAW HP+KRMERI+GVVA+L R NPLQ + DLR+TRQQV
Sbjct: 442  PIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQV 501

Query: 1459 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHES 1280
             YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VSTNI+E  +++ K  +S
Sbjct: 502  QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIME--SIVDKLFDS 559

Query: 1279 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1103
            GME LV+DT   L+GK +VFL+G+WVGVC+DS SF A++RR+RR  E P+Q+EIKRD+H 
Sbjct: 560  GMEELVNDTCSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHK 619

Query: 1102 GEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWG 926
            GEVRIF+D GRILRPL VV NL +IK  KG +++FQ+LL  GI+E +G EEEEDC+TAW 
Sbjct: 620  GEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWS 679

Query: 925  IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 746
            I YL T      PVKY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+S
Sbjct: 680  IKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 739

Query: 745  TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 566
            TTNP+IRVDT SHQLYYPQR LFRTM SDCLGK  +    KG++P+P+ +NGQ AIVAVN
Sbjct: 740  TTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAVN 799

Query: 565  VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 386
            VHLGYNQEDSLVMNR+SLERGMFR+EHVRSYKAEV+N E   KR K+++IV+FGKIQSKI
Sbjct: 800  VHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEIQDKRRKSEDIVNFGKIQSKI 859

Query: 385  GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 206
            GRVDSLDDDGFPY+GANLQ GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+ND+GKN
Sbjct: 860  GRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDGKN 919

Query: 205  FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 26
            +AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFPSRQT
Sbjct: 920  YAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSRQT 979

Query: 25   PGQLLEAA 2
            PGQLLEAA
Sbjct: 980  PGQLLEAA 987


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 633/968 (65%), Positives = 772/968 (79%), Gaps = 4/968 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            L E+ K  L++FCKKA++ FF++YGLISHQINS+N F++ G+Q++FDS GEV +EPGYD 
Sbjct: 36   LNELGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDS 95

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+ DGEWRRA+++FGKVTL+ P+FW G   +S+D   +   + PRHA LQNMTYS+R+K
Sbjct: 96   SKQKDGEWRRASVRFGKVTLDRPSFWGG---TSSDAEHN---MFPRHARLQNMTYSARMK 149

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            +  ++QVYT+ + RSDKFKTG+D VV+K +++  + E+  GR+P+MVKSDLCW++  E+ 
Sbjct: 150  IHVNVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKG 209

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--K 2180
            DC+FD GGYF+IKGAEK FIAQEQIC+KRLW++    W+++Y+   KR R+ +++V   K
Sbjct: 210  DCDFDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEVKRNRLIVRLVELSK 269

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
            +E++   +K L  YF   EIP+W++FFALGV +D+EV+ LI     +  I NI   SIHD
Sbjct: 270  LEYIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASIHD 329

Query: 1999 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 1820
            AD+K + FR+   A+ ++ +L++  R+PP ES+E+ IS YLFP L SR  KA FL YMVK
Sbjct: 330  ADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYMVK 389

Query: 1819 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 1640
            CLLEAY G RK DNRD  RNK             +VH+ HA RRM KA+QRDLY DR+V 
Sbjct: 390  CLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRDVH 449

Query: 1639 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 1460
             I+HYLDASI+TNGL+RAFSTGAW HPFK MER++GVV +L R NPLQ + DLR+TRQQV
Sbjct: 450  PIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQQV 509

Query: 1459 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHES 1280
             YTG+VGDARYPHPSHWG+VCFLSTPDGENCGLVKNLA  G+VSTNI E  +L+ K  +S
Sbjct: 510  LYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISE--SLVDKLFDS 567

Query: 1279 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1103
            GME LVDDT   L+GKH+VFL+G+WVGVC+DS  FV +LR  RR+ E+PYQ+EIKRD+  
Sbjct: 568  GMEKLVDDTYTKLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQQ 627

Query: 1102 GEVRIFADAGRILRPLFVVQNLKKIKDLK-GHFSFQSLLSSGIVEFIGPEEEEDCQTAWG 926
             EVRIF+DAGRILRPL VV+NL KIK  K G++ F SLL  GI+EFIG EEEEDC TAWG
Sbjct: 628  REVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWG 687

Query: 925  IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 746
            I +L        P+KYSHCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+S
Sbjct: 688  IKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFS 747

Query: 745  TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 566
            TTNP+IRVDT SHQL+YPQR LFRTM+SDCL           ++P+P+ FNGQ AIVAVN
Sbjct: 748  TTNPNIRVDTLSHQLHYPQRPLFRTMISDCL-----------VLPKPELFNGQNAIVAVN 796

Query: 565  VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 386
            VHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E   KR K+++ ++FGKIQSKI
Sbjct: 797  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKI 856

Query: 385  GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 206
            GRVDSLDDDGFP+IGAN+Q+GDIVIGK A +G DHS+KLKHTERGMVQKVVLS+NDEGKN
Sbjct: 857  GRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKN 916

Query: 205  FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 26
            FAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   G+VPDIVINPHAFPSRQT
Sbjct: 917  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQT 976

Query: 25   PGQLLEAA 2
            PGQLLEAA
Sbjct: 977  PGQLLEAA 984


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score = 1288 bits (3332), Expect = 0.0
 Identities = 637/972 (65%), Positives = 771/972 (79%), Gaps = 8/972 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            + ++ +GFLK FCK+A+ AFF +YGLISHQINS+NDF+ +GIQ++FDS GE+++EPGYDP
Sbjct: 43   IHDLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDP 102

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+G+ EWR A++KFGKVTL  P+FW G     +D  K+Y  +LPRHA LQNM+Y+S++K
Sbjct: 103  SKKGESEWRYASVKFGKVTLGMPSFWGG-----SDDEKEY-KMLPRHARLQNMSYASKMK 156

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            V   ++VYT+ L  SDKFKTG    ++K IL+    ++  G +P+MVKSDLCWM   E+ 
Sbjct: 157  VNITVEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKG 216

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV--PK 2180
            DC+FD GGYF+IKGAEKTFIAQEQ CLKRL +      ++AYR   KR R+ I++V   K
Sbjct: 217  DCDFDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISK 276

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
            +E++   EK+LT YF   EIPVW+ FFALGV +DREV+ LI  D E+  I+NIL  SI D
Sbjct: 277  LENIEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFASIRD 336

Query: 1999 ADKKFD----GFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 1832
            ADK  D    GFR+G NA+K++ E+++   +PP ES+EE IS YLFP+L    QKA FL 
Sbjct: 337  ADKLNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLG 396

Query: 1831 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 1652
            YMVK LL+AY GRRK DNRDD RNK             + HI HA RRM KA+QRDLY D
Sbjct: 397  YMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDLYGD 456

Query: 1651 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 1472
            R V+ I+HYLDASI+TNG+SRAFSTGAW HPFKRMER++GVVA++ R NPLQ + D+R+T
Sbjct: 457  RAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKT 516

Query: 1471 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKK 1292
            RQQV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+ G+VSTN+LE  +L+ +
Sbjct: 517  RQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLE--SLIPQ 574

Query: 1291 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1115
                GME LVDDT   L GK +VFL+GDWVGVC+DS SFV +LRR RR+ ++P+Q+EIKR
Sbjct: 575  LLTCGMEKLVDDTFTSLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKR 634

Query: 1114 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQ 938
            D H GEVRIF+DAGRILRPL VV+NL K+K  KG   SFQ  L +GI+E IG EEEEDC 
Sbjct: 635  DVHQGEVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCS 694

Query: 937  TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 758
            TAWGI YLF  +      K++HCE D SFLLGLS GIIP+ANHDHARRVLYQ+ KHSQQA
Sbjct: 695  TAWGIKYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQA 754

Query: 757  IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 578
            IG+STTNP++RVDT SHQL+YPQR LF+TM SDCLGK      H  +VP+P+++NGQ AI
Sbjct: 755  IGFSTTNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKP---GRHNRIVPKPEYYNGQNAI 811

Query: 577  VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 398
            VAVNVHLG+NQEDS+VMNRASLERGMFR+EH+RSYKAEV+N E   KR K D+ V+FGK+
Sbjct: 812  VAVNVHLGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLDKRRKPDDCVNFGKM 871

Query: 397  QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 218
            QSK GRVDSLDDDGFPY+GANLQ+GDI+IG+ + +G DHSIKLKHTERGMVQKV+LS+ND
Sbjct: 872  QSKFGRVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLSSND 931

Query: 217  EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 38
            +GKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   G+VPDIVINPHAFP
Sbjct: 932  DGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFP 991

Query: 37   SRQTPGQLLEAA 2
            SRQTPGQLLEAA
Sbjct: 992  SRQTPGQLLEAA 1003


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1276 bits (3302), Expect = 0.0
 Identities = 643/1019 (63%), Positives = 780/1019 (76%), Gaps = 4/1019 (0%)
 Frame = -2

Query: 3046 IEMDREWDFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEADCVLQEVDKGFL 2867
            +E D   +   + G SS +  +K  K ST M               ++   L ++ +  L
Sbjct: 2    VEYDDAMEQDNDIGTSSKT--EKLFKASTDMDIDFDSDSGSDCDFMDSSTSLTDIGEAKL 59

Query: 2866 KAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGEWR 2687
            K FC KA+T FF +YGLISHQINS+NDF+++GIQ+ FDS GE+V+EPGYDPSK+G+ EWR
Sbjct: 60   KDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWR 119

Query: 2686 RATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQVYT 2507
             A++KFGKV LE PTFW+G     AD  K    +LPRHA LQNMTYSS++KV   ++VYT
Sbjct: 120  YASVKFGKVALEKPTFWSG-----ADEHK----MLPRHARLQNMTYSSKMKVNVSVEVYT 170

Query: 2506 EGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQGGY 2327
              + RSDKFKTG D  V+K +LN  +  +  G LP+MVKSDLCWM   E+ DC+FD GGY
Sbjct: 171  RKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGY 230

Query: 2326 FVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMV--PKVEHLVAGEK 2153
            F+IKGAEK FIAQEQICLKRLW++    W+++Y+   KR R+ +++V    +E + A +K
Sbjct: 231  FLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAEKK 290

Query: 2152 ILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDGFR 1973
             LT YF   EIP+W++FFALGV +D+EV+ LIG    +  I NI   SIHDAD+K +GFR
Sbjct: 291  CLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFR 350

Query: 1972 KGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGR 1793
            +G  A++++   ++G R+PP E+ E+    YLFP L S  QKA FL YMVKCLL+AY G+
Sbjct: 351  RGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQ 409

Query: 1792 RKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDAS 1613
            RK +N D  RNK             +VHI HA RRM KA+Q+DLY DR+V+ I+HYLDAS
Sbjct: 410  RKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDAS 469

Query: 1612 IITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDA 1433
            I+TNGLSRAFSTGAW HP+KRMERI+GVVA+L R NPLQ + DLR+TR  V YTG+VGDA
Sbjct: 470  IVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDA 529

Query: 1432 RYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGMELV-DDT 1256
            R+PHPSHWG+VCFLSTPDGENCGLVKNLA+ G+VS NILE   L+ K    GME V +D+
Sbjct: 530  RFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEP--LIDKLIARGMEKVPEDS 587

Query: 1255 SCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHHGEVRIFADA 1076
               L+ K +VFL+G+WVGVC+DS  FVA+LRR RR+ ++P Q+EIKRD+   EVRIF+DA
Sbjct: 588  HSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDA 647

Query: 1075 GRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQTAWGIDYLFTAEL 899
            GRILRPL VVQNL KI+  KG + +FQSLL  GI+EF+G EEEEDC TAWGI +L +   
Sbjct: 648  GRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVD 707

Query: 898  ENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYSTTNPSIRVD 719
                +KY+HCE D SFLLGLS GIIPFANHDHARRVLYQ+ KHSQQAIG+ TTNP+IRVD
Sbjct: 708  GKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVD 767

Query: 718  TNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVNVHLGYNQED 539
            T SHQLYYPQR LFRT+ SDCLGK   +  H G+VP+P+ +NGQ AIVAVNVHLGYNQED
Sbjct: 768  TLSHQLYYPQRPLFRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQED 827

Query: 538  SLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKIGRVDSLDDD 359
            SLVMNRASLERGMFR+EH+RSYKA+V+N E   KR K D+ V+FGKI SKIGRVDSLDDD
Sbjct: 828  SLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKYDDNVNFGKIPSKIGRVDSLDDD 887

Query: 358  GFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQV 179
            GFP+IGANLQ+GDIVIG+ A +G DHSIKLKHTERGMVQKVVLS+NDEGKNFAVVSLRQV
Sbjct: 888  GFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQV 947

Query: 178  RAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQTPGQLLEAA 2
            R+PCLGDKFSSMHGQKGVLGFLESQENFPF + GIVPDIVINPH+FPSRQTPGQLLEAA
Sbjct: 948  RSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAA 1006


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score = 1266 bits (3276), Expect = 0.0
 Identities = 627/968 (64%), Positives = 757/968 (78%), Gaps = 4/968 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            L ++ + FL  FCK+AS +FF++YGL+SHQINS+NDFV++GIQ++FDS GE+V+EP +DP
Sbjct: 46   LHDLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDP 105

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+G+ +WR A +KFGKVTL  P FW G     +D  K+Y ++LPRHA LQNMTYS+R+ 
Sbjct: 106  SKKGNADWRFAAIKFGKVTLSKPCFWGG-----SDSDKEY-NMLPRHARLQNMTYSARMS 159

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEER 2354
            V   +QVYT+ L  SDKFKTG + ++EKT L+    ++  GR+P+MVKS+LCWM   E+ 
Sbjct: 160  VNITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKG 219

Query: 2353 DCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKM--VPK 2180
            DCEFDQGGYF+I GAEKTFIAQEQ CLKRL +      ++AYR   KR R+ I++  + K
Sbjct: 220  DCEFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEVKRHRLIIRLSGISK 279

Query: 2179 VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHD 2000
            +E++   EK+L+ YF   EIPVW+ FFALGV +D+EV+ LI    E+  I+NIL  SI D
Sbjct: 280  LENVEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFASIRD 339

Query: 1999 ADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVK 1820
            AD++ D FR+G NA+++++  ++   +PP ESVE+ IS YLFP++    QKA FL YMVK
Sbjct: 340  ADERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGYMVK 399

Query: 1819 CLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQ 1640
            CLL+   G RK DNRDD RNK             + H+ HA R+M KA+QRDL  D  V+
Sbjct: 400  CLLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDHVVR 459

Query: 1639 SIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQV 1460
             ++HYLDASI+TNG+SRAFSTGAW HPFKRMERI+GVVA++ R NPLQ + D+R+TRQQV
Sbjct: 460  PVEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTRQQV 519

Query: 1459 SYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHES 1280
             YTG+ GDARYPHPSHWGKVCFLSTPDGENCGLVKNLA+  +VS NI E   +L K  + 
Sbjct: 520  QYTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEP--ILPKLFKC 577

Query: 1279 GME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDKHH 1103
            G+E LVDDT   L GKH+VFL+GDWVG+C DS  FV KLRR RR  ++P+Q+EIKRD+H 
Sbjct: 578  GIEELVDDTYTSLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDEHK 637

Query: 1102 GEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTAWG 926
            GEVRIF+DAGRILRPL VVQ LKKIK  KG   +FQ  L  GI+EFIG EEEEDC+TAW 
Sbjct: 638  GEVRIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTAWA 697

Query: 925  IDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIGYS 746
            I YLF  E +   VKY+HCE D SFLLGLS GIIPFANHDHARRVLYQS KHSQQAIGYS
Sbjct: 698  IKYLFMEE-QGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGYS 756

Query: 745  TTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVAVN 566
            TTNP++RVDT SH L+YPQR LFRTM++D LGK  Y   H G +P+P++FNGQ AIVAVN
Sbjct: 757  TTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVAVN 816

Query: 565  VHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQSKI 386
            VHLGYNQEDS+VMNRASLERGMFR+EH+RSYKAEVEN     KR K DE V+FGKIQSK 
Sbjct: 817  VHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLEKRRKPDECVNFGKIQSKF 876

Query: 385  GRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEGKN 206
            GRVD+LDDDGFP +GA+LQ+GDI+IG+ + +G DHSIKLKHTERGMVQKVVLS+ND GKN
Sbjct: 877  GRVDNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDAGKN 936

Query: 205  FAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSRQT 26
            FAVVSLRQVR+P LGDKFSSMHGQKGVLGFLE QENFPF   GIVPDIVINPHAFPSRQT
Sbjct: 937  FAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPSRQT 996

Query: 25   PGQLLEAA 2
            PGQLLEAA
Sbjct: 997  PGQLLEAA 1004


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score = 1265 bits (3273), Expect = 0.0
 Identities = 630/970 (64%), Positives = 760/970 (78%), Gaps = 5/970 (0%)
 Frame = -2

Query: 2896 VLQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYD 2717
            +L+E+    ++ FCKKAS  FF++YGLISHQINS+N F   G+Q  FDS G++ + PG+D
Sbjct: 43   ILKELGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFD 102

Query: 2716 PSKRGDGE-WRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSR 2540
            PSK+GD E +R A++KFGKVTL+ P FW GE      G    + +LPRHA LQ MTY+S+
Sbjct: 103  PSKKGDNEHYRYASVKFGKVTLDRPMFWCGE------GNTQEMKMLPRHARLQRMTYASK 156

Query: 2539 IKVETHLQVYTEGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHE 2360
            +KV   +QVY     RSDKFKTG +  +++ I+ + + E+  GRLP+MVKSDLCWM+  E
Sbjct: 157  MKVNVQVQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVE 216

Query: 2359 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVPK 2180
            + DCEFD GGYF+IKGAEK FIAQEQI LKRLWV   P W++AY+   KR R+ +K+V  
Sbjct: 217  KGDCEFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQMKRNRMVVKLVEN 276

Query: 2179 --VEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSI 2006
              VE +  GEK+LT YF   EIPVWL+FFALGV +D+++V LI     +  I NIL  SI
Sbjct: 277  TTVEGIKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASI 336

Query: 2005 HDADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYM 1826
             +AD+K + FR+G NA+ +I+E ++G ++PP ES++E ++ Y+FP++    +KA +LAYM
Sbjct: 337  READEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYM 396

Query: 1825 VKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDRE 1646
            VK LL AY GRRK DNRDD RNK             +VHI HA +RM KA+QRDLY DR+
Sbjct: 397  VKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRD 456

Query: 1645 VQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQ 1466
            V  I+HYLDASIITNGL RAFSTGAW HP+KRMERI+GVVA+L RTNPLQ + +LRRTRQ
Sbjct: 457  VHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQ 516

Query: 1465 QVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFH 1286
            QV YTG+VGDARYPHPSHWGKVCFLSTPDGENCGLVKN+A  G+VSTN+ E  ++L +  
Sbjct: 517  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTE--SILPQLF 574

Query: 1285 ESGM-ELVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKRDK 1109
              GM ELVDDT+ +L  K +VFL+GDWVGVC DS+SFVA+LR RRRK E+P+Q+EIKRD 
Sbjct: 575  ACGMEELVDDTTAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDP 634

Query: 1108 HHGEVRIFADAGRILRPLFVVQNLKKIKDLKGH-FSFQSLLSSGIVEFIGPEEEEDCQTA 932
               EVRI +DAGRILRPL VV NL KIK  K    SFQSLL +G++E IGPEEEEDC+TA
Sbjct: 635  SQEEVRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTA 694

Query: 931  WGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQAIG 752
            WG+ YLF  E ++  VKY+HCE D SFLLGLS  ++PFANHDHARRVLYQS KHS QAIG
Sbjct: 695  WGVPYLFGKEGKS-SVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 753

Query: 751  YSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAIVA 572
            +STTNP IRVD  SHQL+YPQ+ LF+TM SDCLGK  Y    K ++P+ +F+NGQ AIVA
Sbjct: 754  FSTTNPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGYLGPSK-LLPKSEFYNGQNAIVA 812

Query: 571  VNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKIQS 392
            VNVHLGYNQEDSLVMNRASL+RGMFR+EH+RSYKAE EN E   K+ K ++IV+FGKIQS
Sbjct: 813  VNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKRKPEDIVNFGKIQS 872

Query: 391  KIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSANDEG 212
            KIGRVDSLDDDGFP++GANLQ GDI+IG+ A +G DHSIKLKHTERG VQKVVLS+NDEG
Sbjct: 873  KIGRVDSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEG 932

Query: 211  KNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFPSR 32
            KNFAVVSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPF K GIVPDIVINPHAFPSR
Sbjct: 933  KNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSR 992

Query: 31   QTPGQLLEAA 2
            QTPGQLLEAA
Sbjct: 993  QTPGQLLEAA 1002


>ref|XP_004157128.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1031

 Score = 1249 bits (3231), Expect = 0.0
 Identities = 618/972 (63%), Positives = 751/972 (77%), Gaps = 8/972 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            + ++ + FLK FCKK+S AFF QYGLISHQINS+NDF+ +GIQ+ FD  G+++++PGYDP
Sbjct: 40   IHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDP 99

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+GDGEWR AT+KFGKVTL+ P FW G     A   K+Y ++LPRHA LQNMTYSSR+K
Sbjct: 100  SKKGDGEWRYATVKFGKVTLDKPKFWGG-----AASGKEY-NMLPRHARLQNMTYSSRMK 153

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILN--EYHTEVNFGRLPIMVKSDLCWMSKHE 2360
            +   L++YT+ L  SDKFKTG D  V+K  +     + +V  GRLP+MV SDLCWM   +
Sbjct: 154  INISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQ 213

Query: 2359 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP- 2183
            +RDCEFD+GGYF+IKGAEK FIAQEQICL+RLW++    W++AYR   KR R+ I++V  
Sbjct: 214  KRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVEN 273

Query: 2182 -KVEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSI 2006
             K E L + EK+L  YF   E+PVW++FFALGV +D+E+V LI    ++  + NIL  S+
Sbjct: 274  SKSEDLKSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASV 333

Query: 2005 H--DADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 1832
               D D K+  FR+G  A+  +   ++   +PP + +E+ ++ YLF  L    QK  FL 
Sbjct: 334  REVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLG 393

Query: 1831 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 1652
            YMVKCLL+AY GRRK DNRDD RNK             +VHI HA RRM KA+QRDLY D
Sbjct: 394  YMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGD 453

Query: 1651 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 1472
            R+V  I+HYLDASIITNGLSRAFSTGAW H FKRMERI+GVVA+L R NPLQ + +LRRT
Sbjct: 454  RQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAELRRT 513

Query: 1471 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKK 1292
            RQQV+YTG+VGDARYPHPSHWG+VCFLSTPDGENCGL+KNL+  G+VS N  +  ++   
Sbjct: 514  RQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKK--SITPT 571

Query: 1291 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1115
                GME LVD+TS    GK+R+FLDG+WVGVC+DS SFV  +RR+RR+    +Q+E+KR
Sbjct: 572  LFRCGMENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKR 631

Query: 1114 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQ 938
            D+   EVRIF+DAGRILRPL VV+NL +I   KG +++FQSLL  GI+E IG EEEEDC+
Sbjct: 632  DEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCR 691

Query: 937  TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 758
             AW I +L   E      KYSHCE D SFLLGLS G++PFANHDHARR L+QS KHS QA
Sbjct: 692  VAWSIKHLMEDE---GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQA 748

Query: 757  IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 578
            IG+S TN + RVDT SHQL+YPQR LFRTM +DCLG   Y   H G++P+P+F+NGQ AI
Sbjct: 749  IGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAI 808

Query: 577  VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 398
            VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E + KR K+D+ ++FGK 
Sbjct: 809  VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKT 868

Query: 397  QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 218
            QSKIGRVDSLDDDGFPYIGANLQ+GDIVIG+ A +G DHSIKLKHTE+GMVQKVVLS+ND
Sbjct: 869  QSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSND 928

Query: 217  EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 38
            +GKN+AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFP
Sbjct: 929  DGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 988

Query: 37   SRQTPGQLLEAA 2
            SRQTPGQLLEAA
Sbjct: 989  SRQTPGQLLEAA 1000


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1248 bits (3229), Expect = 0.0
 Identities = 618/972 (63%), Positives = 751/972 (77%), Gaps = 8/972 (0%)
 Frame = -2

Query: 2893 LQEVDKGFLKAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDP 2714
            + ++ + FLK FCKK+S AFF QYGLISHQINS+NDF+ +GIQ+ FD  G+++++PGYDP
Sbjct: 40   IHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDP 99

Query: 2713 SKRGDGEWRRATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIK 2534
            SK+GDGEWR AT+KFGKVTL+ P FW G     A   K+Y ++LPRHA LQNMTYSSR+K
Sbjct: 100  SKKGDGEWRYATVKFGKVTLDKPKFWGG-----AASGKEY-NMLPRHARLQNMTYSSRMK 153

Query: 2533 VETHLQVYTEGLSRSDKFKTGVDTVVEKTILN--EYHTEVNFGRLPIMVKSDLCWMSKHE 2360
            +   L++YT+ L  SDKFKTG D  V+K  +     + +V  GRLP+MV SDLCWM   +
Sbjct: 154  INISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQ 213

Query: 2359 ERDCEFDQGGYFVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP- 2183
            +RDCEFD+GGYF+IKGAEK FIAQEQICL+RLW++    W++AYR   KR R+ I++V  
Sbjct: 214  KRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVEN 273

Query: 2182 -KVEHLVAGEKILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSI 2006
             K E L + EK+L  YF   E+PVW++FFALGV +D+E+V LI    ++  + NIL  S+
Sbjct: 274  SKSEDLKSKEKVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTVLNILFASV 333

Query: 2005 H--DADKKFDGFRKGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLA 1832
               D D K+  FR+G  A+  +   ++   +PP + +E+ ++ YLF  L    QK  FL 
Sbjct: 334  REVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGSKQKCHFLG 393

Query: 1831 YMVKCLLEAYRGRRKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKD 1652
            YMVKCLL+AY GRRK DNRDD RNK             +VHI HA RRM KA+QRDLY D
Sbjct: 394  YMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKALQRDLYGD 453

Query: 1651 REVQSIDHYLDASIITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRT 1472
            R+V  I+HYLDASIITNGLSRAFSTGAW H FKRMERI+GVVA+L R NPLQ + +LRRT
Sbjct: 454  RQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQTMAELRRT 513

Query: 1471 RQQVSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKK 1292
            RQQV+YTG+VGDARYPHPSHWG+VCFLSTPDGENCGL+KNL+  G+VS N  +  ++   
Sbjct: 514  RQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTKK--SITPT 571

Query: 1291 FHESGME-LVDDTSCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQIEIKR 1115
                GME LVD+TS    GK+R+FLDG+WVGVC+DS SFV  +RR+RR+    +Q+E+KR
Sbjct: 572  LFRCGMENLVDNTSTSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFLHQVEVKR 631

Query: 1114 DKHHGEVRIFADAGRILRPLFVVQNLKKIKDLKG-HFSFQSLLSSGIVEFIGPEEEEDCQ 938
            D+   EVRIF+DAGRILRPL VV+NL +I   KG +++FQSLL  GI+E IG EEEEDC+
Sbjct: 632  DEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGTEEEEDCR 691

Query: 937  TAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFANHDHARRVLYQSAKHSQQA 758
             AW I +L   E      KYSHCE D SFLLGLS G++PFANHDHARR L+QS KHS QA
Sbjct: 692  VAWSIKHLMEDE---GTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQSQKHSNQA 748

Query: 757  IGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSDHHKGMVPRPDFFNGQCAI 578
            IG+S TN + RVDT SHQL+YPQR LFRTM +DCLG   Y   H G++P+P+F+NGQ AI
Sbjct: 749  IGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEFYNGQNAI 808

Query: 577  VAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENSEGAGKRLKADEIVSFGKI 398
            VAVNVHLGYNQEDSLVMNRASLERGMFR+EH+RSYKAEV+N E + KR K+D+ ++FGK 
Sbjct: 809  VAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSEKRRKSDDAINFGKT 868

Query: 397  QSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIKLKHTERGMVQKVVLSAND 218
            QSKIGRVDSLDDDGFPYIGANLQ+GDIVIG+ A +G DHSIKLKHTE+GMVQKVVLS+ND
Sbjct: 869  QSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVLSSND 928

Query: 217  EGKNFAVVSLRQVRAPCLGDKFSSMHGQKGVLGFLESQENFPFNKDGIVPDIVINPHAFP 38
            +GKN+AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPF   GIVPDIVINPHAFP
Sbjct: 929  DGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 988

Query: 37   SRQTPGQLLEAA 2
            SRQTPGQLLEAA
Sbjct: 989  SRQTPGQLLEAA 1000


>gb|ABG29321.1| DNA-directed RNA polymerase, putative [Solanum bulbocastanum]
          Length = 1018

 Score = 1248 bits (3229), Expect = 0.0
 Identities = 624/991 (62%), Positives = 764/991 (77%), Gaps = 42/991 (4%)
 Frame = -2

Query: 3025 DFLEEAGPSSSSIRDKFSKGSTRMXXXXXXXXXXXXXXXEAD-------CVLQEVDKGFL 2867
            + +E+ G SS   ++K S GST M               + D        + +E+  GFL
Sbjct: 11   NIMEDVGCSSG--KEKTSNGSTMMDFDVDGLFEVDDYDWDEDEDEDDNLDMAKELGGGFL 68

Query: 2866 KAFCKKASTAFFEQYGLISHQINSFNDFVDHGIQQLFDSIGEVVIEPGYDPSKRGDGEWR 2687
            + FCKKAS  FFE+YG+ISHQI+S+NDF+ +GIQ++FDS+GE+ +EPGYDPSK+G+G+W+
Sbjct: 69   RNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGDWK 128

Query: 2686 RATLKFGKVTLEPPTFWTGEKFSSADGAKDYLDLLPRHAHLQNMTYSSRIKVETHLQVYT 2507
             A++KFGKVTL+ P FW GEKFS+ +G ++YL+L PRHA LQNMTYS+RI VETH  V+T
Sbjct: 129  HASVKFGKVTLDRPKFWAGEKFSAYNG-EEYLNLWPRHARLQNMTYSARIIVETH--VFT 185

Query: 2506 EGLSRSDKFKTGVDTVVEKTILNEYHTEVNFGRLPIMVKSDLCWMSKHEERDCEFDQGGY 2327
            + L RSDKFKTGV+  V+K  + E   +V  GR+P+MV S+LCWMS  +  DCEFD GGY
Sbjct: 186  KKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCEFDHGGY 245

Query: 2326 FVIKGAEKTFIAQEQICLKRLWVAKEPTWSIAYRPVSKRKRVFIKMVP--KVEHLVAGEK 2153
            F++KGAEK FIAQEQICLKRLWV+   TW +AYR   KR RV++K+    K EH+    K
Sbjct: 246  FIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGEKRNRVYLKLTETLKHEHIKGEAK 305

Query: 2152 ILTAYFYVAEIPVWLMFFALGVPNDREVVKLIGLDPEEDDIANILVPSIHDADKKFDGFR 1973
             L+ YF+ AE+P+W++FFALGV +DREVV LI +D ++ +I NILV SIHDADK  + FR
Sbjct: 306  ALSVYFF-AEMPIWVLFFALGVSSDREVVDLIDVDIKDTNIINILVASIHDADKNCEDFR 364

Query: 1972 KGGNAIKHIKELMQGCRYPPTESVEELISTYLFPHLTSRGQKASFLAYMVKCLLEAYRGR 1793
            KG  A+ ++  L++ C++PP ESVEE I  YLFP+L+   QKA FL YMVKCLL +Y GR
Sbjct: 365  KGKKALAYVDRLVKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLLLSYIGR 424

Query: 1792 RKVDNRDDMRNKXXXXXXXXXXXXXRVHIKHAERRMVKAMQRDLYKDREVQSIDHYLDAS 1613
            RKVDNRDD RNK             RVH+KHAERRMVKA+QRDL  DR+VQ I+HYLDAS
Sbjct: 425  RKVDNRDDFRNKRLDLAGELLERELRVHVKHAERRMVKALQRDLCGDRQVQPIEHYLDAS 484

Query: 1612 IITNGLSRAFSTGAWVHPFKRMERIAGVVASLRRTNPLQAVCDLRRTRQQVSYTGRVGDA 1433
            IITNGLSRAFSTG W HP+KRMER++GVVA+LRRTNPLQ   DLR+TRQQV+YTG+VGDA
Sbjct: 485  IITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYTGKVGDA 544

Query: 1432 RYPHPSHWGKVCFLSTPDGENCGLVKNLASLGIVSTNILEHTNLLKKFHESGME-LVDDT 1256
            RYPHPSHWGKVCFLSTPDGENCGLVKNLAS+G+VST +L+   LL+     GM+ LVDD+
Sbjct: 545  RYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKP--LLETLFRCGMQKLVDDS 602

Query: 1255 SCLLNGKHRVFLDGDWVGVCKDSSSFVAKLRRRRRKLEVPYQ------------------ 1130
            +  L+GK +V LDGDWVGVC+DS+ FV+KLRR+RR+ EVP+Q                  
Sbjct: 603  ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRQRRRNEVPHQLAHTLAIPPGICYLLPTH 662

Query: 1129 ---------IEIKRDKHHGEVRIFADAGRILRPLFVVQNLKKIKDLK-----GHFSFQSL 992
                     +E+KRD+   EVRIF+DAGRI+RPL VV NLK IK LK     G + FQ+L
Sbjct: 663  VPVTLTEAQVEVKRDEQQDEVRIFSDAGRIMRPLLVVSNLKNIKALKDGMKGGDYGFQTL 722

Query: 991  LSSGIVEFIGPEEEEDCQTAWGIDYLFTAELENPPVKYSHCEFDSSFLLGLSTGIIPFAN 812
            L  GI+E IGPEEEEDC+TAWG++YL  A+ ENPPV Y+HCE D SFLLGLS G+IPFAN
Sbjct: 723  LDKGIIELIGPEEEEDCRTAWGVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFAN 782

Query: 811  HDHARRVLYQSAKHSQQAIGYSTTNPSIRVDTNSHQLYYPQRSLFRTMLSDCLGKSRYSD 632
            HDHARRVLYQS KHSQQAIG+ST NP+ RVDTN+HQLYYPQR LF TMLSD LGK + + 
Sbjct: 783  HDHARRVLYQSEKHSQQAIGFSTVNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCAR 842

Query: 631  HHKGMVPRPDFFNGQCAIVAVNVHLGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVENS 452
            H KGM+ RP+++NGQCAIVAVNVHLGYNQEDS+VMNRASLERGMFR+EHVRSYKAEV+N 
Sbjct: 843  HQKGMLSRPEYYNGQCAIVAVNVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNK 902

Query: 451  EGAGKRLKADEIVSFGKIQSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAAAGVDHSIK 272
            E  GK+ K ++ V+FGK QSKIGRVDSLDDDGFP+IGANLQ+GDI+IGK+A +G DHS+K
Sbjct: 903  EAMGKKSKVEDSVNFGKTQSKIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVK 962

Query: 271  LKHTERGMVQKVVLSANDEGKNFAVVSLRQV 179
            +KHTERGMVQKV+LSAND+GKNFAVVSLRQV
Sbjct: 963  MKHTERGMVQKVLLSANDDGKNFAVVSLRQV 993