BLASTX nr result

ID: Mentha26_contig00025802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00025802
         (467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus...   106   4e-21
ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-lik...    70   3e-10
ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-lik...    67   3e-09

>gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus guttatus]
          Length = 430

 Score =  106 bits (264), Expect = 4e-21
 Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
 Frame = +1

Query: 136 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRNGKSGRRSN-PTPSLSVVS 312
           MENLGLVSSPKIVLGVSPNPRNS I  SSK  VGLPNLL++ G  GR +   T SL V+S
Sbjct: 1   MENLGLVSSPKIVLGVSPNPRNSVI--SSKPLVGLPNLLKKTGNYGRHTTIHTSSLQVLS 58

Query: 313 LFGARKATKTIVEEKVSEDCFASIAPSGQQT 405
           LF + K TKTIV EK ++D FA+I+ SGQ+T
Sbjct: 59  LFRSPKPTKTIVSEKAAKDRFATISSSGQET 89


>ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum
           lycopersicum]
          Length = 443

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/87 (48%), Positives = 51/87 (58%)
 Frame = +1

Query: 136 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRNGKSGRRSNPTPSLSVVSL 315
           MEN+G+VSSPK+VLG+S N       +SSK F GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENIGIVSSPKMVLGLSSNS-----VISSKPFFGLPHLPKRPFKNGRTVRPTTCFEVVSC 55

Query: 316 FGARKATKTIVEEKVSEDCFASIAPSG 396
           F   + TK IV  K     FAS   SG
Sbjct: 56  FQGPRLTKKIVLGKSGRGSFASTTTSG 82


>ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum tuberosum]
          Length = 443

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 41/89 (46%), Positives = 52/89 (58%)
 Frame = +1

Query: 136 MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRNGKSGRRSNPTPSLSVVSL 315
           MEN+ +VSSPK+VLG+S NP      +S+K   GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENICIVSSPKMVLGLSSNP-----VISNKPLFGLPHLPKRPFKNGRIVRPTTCFEVVSC 55

Query: 316 FGARKATKTIVEEKVSEDCFASIAPSGQQ 402
           F + + TK IV  K     FAS   SG Q
Sbjct: 56  FQSPRLTKKIVLGKSGRGSFASTTTSGGQ 84


Top