BLASTX nr result

ID: Mentha26_contig00025800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00025800
         (425 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus...   120   3e-25
ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-lik...    84   2e-14
ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-lik...    81   1e-13
ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vi...    58   1e-06

>gb|EYU28232.1| hypothetical protein MIMGU_mgv1a006810mg [Mimulus guttatus]
          Length = 430

 Score =  120 bits (300), Expect = 3e-25
 Identities = 72/117 (61%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = +2

Query: 77  MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSN-PTPSLSVVS 253
           MENLGLVSSPKIVLGVSPNPRNS IS  SK  VGLPNLL++TG  GR +   T SL V+S
Sbjct: 1   MENLGLVSSPKIVLGVSPNPRNSVIS--SKPLVGLPNLLKKTGNYGRHTTIHTSSLQVLS 58

Query: 254 LFGARKATKTIVEEKVAEDGFASIASSGQQTSSVGAXXXXXXXXXXXXXXXXLFWIG 424
           LF + K TKTIV EK A+D FA+I+SSGQ+TSSVG                 LFWIG
Sbjct: 59  LFRSPKPTKTIVSEKAAKDRFATISSSGQETSSVGV-NPQLSVPPSSQVGSPLFWIG 114


>ref|XP_004250413.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum
           lycopersicum]
          Length = 443

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 53/117 (45%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 77  MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSNPTPSLSVVSL 256
           MEN+G+VSSPK+VLG+S N       +SSK F GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENIGIVSSPKMVLGLSSNS-----VISSKPFFGLPHLPKRPFKNGRTVRPTTCFEVVSC 55

Query: 257 FGARKATKTIVEEKVAEDGFASIASS-GQQTSSVGAXXXXXXXXXXXXXXXXLFWIG 424
           F   + TK IV  K     FAS  +S G+QTSSVG                 LFWIG
Sbjct: 56  FQGPRLTKKIVLGKSGRGSFASTTTSGGKQTSSVGVNPQFSAPSPPSQMGSPLFWIG 112


>ref|XP_006350341.1| PREDICTED: protein TIC 40, chloroplastic-like [Solanum tuberosum]
          Length = 443

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 52/117 (44%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +2

Query: 77  MENLGLVSSPKIVLGVSPNPRNSPISVSSKQFVGLPNLLRRTGKSGRRSNPTPSLSVVSL 256
           MEN+ +VSSPK+VLG+S NP      +S+K   GLP+L +R  K+GR   PT    VVS 
Sbjct: 1   MENICIVSSPKMVLGLSSNP-----VISNKPLFGLPHLPKRPFKNGRIVRPTTCFEVVSC 55

Query: 257 FGARKATKTIVEEKVAEDGFASIASS-GQQTSSVGAXXXXXXXXXXXXXXXXLFWIG 424
           F + + TK IV  K     FAS  +S GQQTSSVG                 LFWIG
Sbjct: 56  FQSPRLTKKIVLGKSGRGSFASTTTSGGQQTSSVGVNPQFSAPSQPSQVGSPLFWIG 112


>ref|XP_002282574.1| PREDICTED: protein TIC 40, chloroplastic [Vitis vinifera]
           gi|296089465|emb|CBI39284.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
 Frame = +2

Query: 77  MENLGLVSSPKIVLGVSP-NPRNSPISVSSKQFVGLPNLLRRTGK--SGRRSNPTPSLSV 247
           M++L LVSSPK+VLG SP NPR+  IS +   F  LP L R+  K  +  +S  +P    
Sbjct: 1   MDSLTLVSSPKLVLGHSPSNPRH--ISCAHSSF-SLPLLFRKPRKFIAASQSGASP---- 53

Query: 248 VSLFGARKATKTIVEEKVAEDGFASIASSGQQTSSVGAXXXXXXXXXXXXXXXXLFWIG 424
                  +  + +VE K+  + FASI+SS Q TSSVG                 LFWIG
Sbjct: 54  -------RTPRHVVETKLGTECFASISSSSQGTSSVGVNPQFSPPPPSSNIGSPLFWIG 105


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