BLASTX nr result

ID: Mentha26_contig00024926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00024926
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007048377.1| Eukaryotic translation initiation factor 3 s...    45   6e-08

>ref|XP_007048377.1| Eukaryotic translation initiation factor 3 subunit A isoform 4
           [Theobroma cacao] gi|508700638|gb|EOX92534.1| Eukaryotic
           translation initiation factor 3 subunit A isoform 4
           [Theobroma cacao]
          Length = 779

 Score = 45.4 bits (106), Expect(2) = 6e-08
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +3

Query: 3   ERDRVRKEREETISNIIQSRKQEREAKRKMIYFL 104
           E DR R+EREE IS IIQ+RK+ERE KRK I+++
Sbjct: 694 EFDRRREEREERISQIIQARKKEREFKRKKIFYV 727



 Score = 37.0 bits (84), Expect(2) = 6e-08
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = +1

Query: 154 EDLKRWRGERKRKPSERRSWTK*LKSRGSERENW 255
           E+ ++   E K+K + R++W + LKSRG E ENW
Sbjct: 741 EEARKLEDEGKKKLNARQNWMRLLKSRGRENENW 774


Top