BLASTX nr result
ID: Mentha26_contig00024806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00024806
(752 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus... 216 7e-54
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu... 197 4e-48
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu... 196 7e-48
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 194 2e-47
emb|CBI37850.3| unnamed protein product [Vitis vinifera] 194 2e-47
ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao] ... 190 4e-46
ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao] ... 190 4e-46
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 189 9e-46
ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutr... 187 3e-45
ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isofo... 185 2e-44
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isofo... 185 2e-44
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps... 184 4e-44
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag... 183 5e-44
gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis] 182 8e-44
ref|XP_007142808.1| hypothetical protein PHAVU_007G018500g [Phas... 181 2e-43
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice... 180 4e-43
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops... 180 4e-43
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops... 180 4e-43
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 180 4e-43
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana] 180 4e-43
>gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus guttatus]
Length = 600
Score = 216 bits (550), Expect = 7e-54
Identities = 118/174 (67%), Positives = 125/174 (71%), Gaps = 15/174 (8%)
Frame = +3
Query: 3 ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQTSGQMLPGL 164
AD DDD G+GLSLNA SRALLMQKLDRTGTASS V V GQTS +LPGL
Sbjct: 425 ADFDDDGGSGLSLNAHSRALLMQKLDRTGTASSITGPPAAPVFGAPPVFGQTSVALLPGL 484
Query: 165 TAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX---------GRLK 317
AAG +MPALT +IDT GVPSECLLLKNMFDPS E EPDFDLD GRLK
Sbjct: 485 AAAGLAMPALTASSIDT-GVPSECLLLKNMFDPSSEVEPDFDLDIKEDVQEECSKFGRLK 543
Query: 318 HIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFP 479
HIYVEKNSAGFVYLRFEN LHGRWFAGKMITAT+M+H DYEA+FP
Sbjct: 544 HIYVEKNSAGFVYLRFENTEAAMAAQRALHGRWFAGKMITATYMLHQDYEARFP 597
>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
gi|550331684|gb|EEE86903.2| hypothetical protein
POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 197 bits (500), Expect = 4e-48
Identities = 108/188 (57%), Positives = 123/188 (65%), Gaps = 28/188 (14%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQT--------- 140
D DDDEG GL+LNA+SRALLMQKLDRTGTASS TA +LG
Sbjct: 411 DFDDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGTPTLPTAPILGAAPAVSPAIAP 470
Query: 141 --SGQML--PGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX- 305
SG +L PGL AG +PA T+P ++TIGVPS+C+LLKNMFDP ETEPDFDLD
Sbjct: 471 LLSGSVLAIPGLPVAGLQLPATTIPTVETIGVPSDCILLKNMFDPKKETEPDFDLDIKED 530
Query: 306 --------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSD 461
G +KHI+V+KNSAGFVY+RFEN LHGRWFAGKMITATFMV
Sbjct: 531 VQEECSRFGNVKHIHVDKNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQT 590
Query: 462 YEAKFPST 485
YEAKFP +
Sbjct: 591 YEAKFPDS 598
>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
gi|550341316|gb|EEE86704.2| hypothetical protein
POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 196 bits (498), Expect = 7e-48
Identities = 107/188 (56%), Positives = 121/188 (64%), Gaps = 28/188 (14%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQT--------- 140
D DDDEG GL+LNA+SRALLMQKLDRTGTASS TA +LG T
Sbjct: 421 DFDDDEGGGLALNARSRALLMQKLDRTGTASSIAGSLGTPTLPTAPILGATPVVSPAVAP 480
Query: 141 --SGQM--LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX- 305
SG + +PGL G +PA +P +DTIGVPS+CL LKNMFDP ETEPDFDLD
Sbjct: 481 LLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKTETEPDFDLDIKED 540
Query: 306 --------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSD 461
G +KHIYV+KNSAGFVY+RFEN LHGRWFAGK+ITATFMV
Sbjct: 541 VQEECSRFGNVKHIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQT 600
Query: 462 YEAKFPST 485
YEAKFP +
Sbjct: 601 YEAKFPDS 608
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 194 bits (494), Expect = 2e-47
Identities = 111/195 (56%), Positives = 125/195 (64%), Gaps = 35/195 (17%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYGVA---------STASVLG---- 134
D DDDEG GLSLNA+SRA+LMQKLDR+GT A S G STA +LG
Sbjct: 414 DFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPV 473
Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
Q L GL AG +PA+TVP+IDTIGVPSECL+LKNMFDP LETEPDF
Sbjct: 474 VSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDF 533
Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
DLD G +KHIYV+KNSAGFV+LRFEN LHGRWFAGKMITA
Sbjct: 534 DLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITA 593
Query: 441 TFMVHSDYEAKFPST 485
TFM+ +YEAKFP +
Sbjct: 594 TFMLPQNYEAKFPDS 608
>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 194 bits (494), Expect = 2e-47
Identities = 111/195 (56%), Positives = 125/195 (64%), Gaps = 35/195 (17%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYGVA---------STASVLG---- 134
D DDDEG GLSLNA+SRA+LMQKLDR+GT A S G STA +LG
Sbjct: 232 DFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPV 291
Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
Q L GL AG +PA+TVP+IDTIGVPSECL+LKNMFDP LETEPDF
Sbjct: 292 VSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDF 351
Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
DLD G +KHIYV+KNSAGFV+LRFEN LHGRWFAGKMITA
Sbjct: 352 DLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITA 411
Query: 441 TFMVHSDYEAKFPST 485
TFM+ +YEAKFP +
Sbjct: 412 TFMLPQNYEAKFPDS 426
>ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao]
gi|508705720|gb|EOX97616.1| Splicing factor isoform 4
[Theobroma cacao]
Length = 452
Score = 190 bits (483), Expect = 4e-46
Identities = 109/195 (55%), Positives = 124/195 (63%), Gaps = 34/195 (17%)
Frame = +3
Query: 3 ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY----GVA--------STASVLG---- 134
ADLDDDEG GLSLN+ SRALLM KLDR+GTASS GVA +TA+VLG
Sbjct: 253 ADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAAPA 312
Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
Q + + GL G +P+ +P IDTIG PSECLLLKNMFDP LETEPDF
Sbjct: 313 VPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKNMFDPDLETEPDF 372
Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
DLD G+LKHIYV+++SAGFVYLRFE+ LHGRWFA KMITA
Sbjct: 373 DLDIKEDVQEECSKFGKLKHIYVDRDSAGFVYLRFEDTQAAMSAQRNLHGRWFAAKMITA 432
Query: 441 TFMVHSDYEAKFPST 485
TFMV YEAKFP +
Sbjct: 433 TFMVPQTYEAKFPDS 447
>ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao]
gi|590684187|ref|XP_007041783.1| Splicing factor isoform
1 [Theobroma cacao] gi|508705717|gb|EOX97613.1| Splicing
factor isoform 1 [Theobroma cacao]
gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
[Theobroma cacao]
Length = 581
Score = 190 bits (483), Expect = 4e-46
Identities = 109/195 (55%), Positives = 124/195 (63%), Gaps = 34/195 (17%)
Frame = +3
Query: 3 ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY----GVA--------STASVLG---- 134
ADLDDDEG GLSLN+ SRALLM KLDR+GTASS GVA +TA+VLG
Sbjct: 382 ADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAAPA 441
Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
Q + + GL G +P+ +P IDTIG PSECLLLKNMFDP LETEPDF
Sbjct: 442 VPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKNMFDPDLETEPDF 501
Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
DLD G+LKHIYV+++SAGFVYLRFE+ LHGRWFA KMITA
Sbjct: 502 DLDIKEDVQEECSKFGKLKHIYVDRDSAGFVYLRFEDTQAAMSAQRNLHGRWFAAKMITA 561
Query: 441 TFMVHSDYEAKFPST 485
TFMV YEAKFP +
Sbjct: 562 TFMVPQTYEAKFPDS 576
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 189 bits (480), Expect = 9e-46
Identities = 106/194 (54%), Positives = 119/194 (61%), Gaps = 34/194 (17%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------------VASTASVLGQT--- 140
D DDDEG GL+LNA+SRA+LMQKLDR+GTASS TA +LG
Sbjct: 416 DFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLAVPTAPILGAAPVI 475
Query: 141 ----------SGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFD 290
S PGL A +P +P++DTIGVPSECLLLKNMFDPS+ETEPDFD
Sbjct: 476 PPIVAPLISGSAPAFPGLPGASVQLPG-AIPSVDTIGVPSECLLLKNMFDPSIETEPDFD 534
Query: 291 LDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITAT 443
LD G L+HIYV+KNSAGFVYLRFEN LHGRWFAGKMITAT
Sbjct: 535 LDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITAT 594
Query: 444 FMVHSDYEAKFPST 485
FMV YE KFP +
Sbjct: 595 FMVPQVYETKFPDS 608
>ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
gi|557110532|gb|ESQ50823.1| hypothetical protein
EUTSA_v10022624mg [Eutrema salsugineum]
Length = 566
Score = 187 bits (476), Expect = 3e-45
Identities = 103/182 (56%), Positives = 120/182 (65%), Gaps = 22/182 (12%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTS--GQMLPGLTAAGF 179
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + S+ G S ++ L GF
Sbjct: 384 DLDDDDGAGLSLNAQSRALLMQKLDRSGTASSTGLTAAGSIHGAASTISPLVAPLVQGGF 443
Query: 180 ----------SMPALTVPA-IDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------- 305
++P + +PA +D +GVPSECLLLKNMFDPS ETEPDFDLD
Sbjct: 444 PPVAGLAGVGNVPGVNMPAALDPVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVQEECS 503
Query: 306 --GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFP 479
G L HI+V+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKFP
Sbjct: 504 KFGNLNHIFVDKNSVGFVYLRFENAQAAMGAQRALHGRWFAGKMITATYMTTETYEAKFP 563
Query: 480 ST 485
+
Sbjct: 564 ES 565
>ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Glycine max]
Length = 421
Score = 185 bits (469), Expect = 2e-44
Identities = 103/180 (57%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVASTASVLGQTSGQM---- 152
D DDDEG GLSLNA SRA+LMQKLDR+GTASS GV +T L T +
Sbjct: 241 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAP 300
Query: 153 LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX--------- 305
+ GL G +P T+P+ID IGVPSECL+LKNMFDP ETEPDFDLD
Sbjct: 301 VGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKF 360
Query: 306 GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
G LKHIYV+K SAGFVYLRFE+ LHGRWFAGKMITA+FMV YE KFP +
Sbjct: 361 GALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 420
>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
Length = 597
Score = 185 bits (469), Expect = 2e-44
Identities = 103/180 (57%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVASTASVLGQTSGQM---- 152
D DDDEG GLSLNA SRA+LMQKLDR+GTASS GV +T L T +
Sbjct: 417 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAP 476
Query: 153 LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX--------- 305
+ GL G +P T+P+ID IGVPSECL+LKNMFDP ETEPDFDLD
Sbjct: 477 VGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKF 536
Query: 306 GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
G LKHIYV+K SAGFVYLRFE+ LHGRWFAGKMITA+FMV YE KFP +
Sbjct: 537 GALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 596
>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
gi|482568547|gb|EOA32736.1| hypothetical protein
CARUB_v10016041mg [Capsella rubella]
Length = 550
Score = 184 bits (466), Expect = 4e-44
Identities = 102/183 (55%), Positives = 117/183 (63%), Gaps = 23/183 (12%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS+ G Q S
Sbjct: 366 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISPLAAPALLQGS 425
Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
+ GL AG +P + +D +G+PSECLLLKNMFDPS ETEP FD D
Sbjct: 426 FPAVAGLAGAGI-IPGVIPAVLDPVGIPSECLLLKNMFDPSTETEPHFDEDIKEDVKEEC 484
Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
G+L HIYV+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKF
Sbjct: 485 SKFGQLDHIYVDKNSVGFVYLRFENTQAAMGAQRALHGRWFAGKMITATYMTTEVYEAKF 544
Query: 477 PST 485
P +
Sbjct: 545 PES 547
>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
vesca]
Length = 588
Score = 183 bits (465), Expect = 5e-44
Identities = 102/185 (55%), Positives = 118/185 (63%), Gaps = 25/185 (13%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVAST----ASVLGQTSGQM------- 152
D DDDEG GLSLNA+SRA+LMQKLDR+G+ SS V ST A +LG G
Sbjct: 403 DFDDDEGGGLSLNARSRAILMQKLDRSGSGSSLAVNSTGLPVAPILGAAPGISSLVAPMA 462
Query: 153 ----LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPS-LETEPDFDLDXXX---- 305
L GL G +P TVP++DTIGVPSECLLL NMFDP +E EPD D+D
Sbjct: 463 SVPGLAGLGVPGLQIPTATVPSVDTIGVPSECLLLTNMFDPKEIEAEPDIDVDIKEDVQE 522
Query: 306 -----GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEA 470
G+LKHI+V+KN+AGFVYLRFEN LHGRWFAGKMITATFM +YE
Sbjct: 523 ECSKYGKLKHIFVDKNTAGFVYLRFENTQAAINARQVLHGRWFAGKMITATFMSPQNYET 582
Query: 471 KFPST 485
KFP +
Sbjct: 583 KFPES 587
>gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis]
Length = 811
Score = 182 bits (463), Expect = 8e-44
Identities = 104/188 (55%), Positives = 124/188 (65%), Gaps = 32/188 (17%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTAS-----------SYGVA-STASVLGQT--- 140
D DDD+G GL+LNA+SRALLMQKLDR+GTA+ S G+A TA +LG
Sbjct: 284 DFDDDDGGGLALNARSRALLMQKLDRSGTATNITGSPGTPAVSTGLALPTAPILGAAPVV 343
Query: 141 ---SGQMLP-----GLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLD 296
S + P GL AGF +PA+TVP+IDTIG PSECL LKNMFDP+ ETEP+FDLD
Sbjct: 344 SPLSASVAPIPALAGLGGAGFQVPAVTVPSIDTIGAPSECLQLKNMFDPAAETEPNFDLD 403
Query: 297 XXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFM 449
G L+HIYV+KNSAG+VYLRFE+ LHGRWFAGKMITA+FM
Sbjct: 404 IKEDVQDECSKFGNLQHIYVDKNSAGYVYLRFEHTQSAIAAQRALHGRWFAGKMITASFM 463
Query: 450 VHSDYEAK 473
+ DYEA+
Sbjct: 464 LPQDYEAR 471
>ref|XP_007142808.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
gi|561015998|gb|ESW14802.1| hypothetical protein
PHAVU_007G018500g [Phaseolus vulgaris]
Length = 603
Score = 181 bits (459), Expect = 2e-43
Identities = 103/188 (54%), Positives = 114/188 (60%), Gaps = 31/188 (16%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTSGQMLP--------- 158
D DDDEG GLSLNA SRA+LMQKLDR+GTASS V S + + +G LP
Sbjct: 413 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSM-VGSLGNSVVSNTGLNLPATGNILAAV 471
Query: 159 -------------GLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDX 299
GL G +P T+P+IDTIGVPSECL+LKNMFDP ETEPDFDLD
Sbjct: 472 PEGSPHSSIPAVSGLAGGGLQIPTATIPSIDTIGVPSECLMLKNMFDPKDETEPDFDLDI 531
Query: 300 XX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMV 452
G LKHIYV+K SAGFVYLRFE LHGRWFAGKMITA+FMV
Sbjct: 532 KEDVEAECSKFGTLKHIYVDKKSAGFVYLRFEETQSAISAQRSLHGRWFAGKMITASFMV 591
Query: 453 HSDYEAKF 476
YE KF
Sbjct: 592 PQSYEDKF 599
>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
Length = 613
Score = 180 bits (457), Expect = 4e-43
Identities = 103/198 (52%), Positives = 116/198 (58%), Gaps = 38/198 (19%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY--------------------------- 104
D+DDDEG GLSLNA SRALLMQKLDR+GTASS
Sbjct: 415 DIDDDEGGGLSLNASSRALLMQKLDRSGTASSMVGFLGNSAVNNTGVNLQATGNIPAGAL 474
Query: 105 -GVASTASVLGQTSG-QMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETE 278
G A S++ S L GL GF +P LT P+I+TIGVPSECLLL+NMFDP E E
Sbjct: 475 LGAAPVGSLVSSLSSVPALAGLPGGGFQIPILTSPSIETIGVPSECLLLRNMFDPENEKE 534
Query: 279 PDFDLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKM 431
PDFD D G L+HIYV+K SAGFVYLRFE+ LHGRWFAGKM
Sbjct: 535 PDFDFDVKEDVEAECSKFGNLQHIYVDKKSAGFVYLRFEDTQSAISAQRALHGRWFAGKM 594
Query: 432 ITATFMVHSDYEAKFPST 485
ITA+FMV YE KFP +
Sbjct: 595 ITASFMVPQSYEDKFPDS 612
>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 610
Score = 180 bits (457), Expect = 4e-43
Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS G Q S
Sbjct: 426 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 485
Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
+ GL +G +P + D IGVPSECLLLKNMFDPS ETE DFD D
Sbjct: 486 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 544
Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
G+L HI+V+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKF
Sbjct: 545 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 604
Query: 477 PST 485
P +
Sbjct: 605 PES 607
>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 599
Score = 180 bits (457), Expect = 4e-43
Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS G Q S
Sbjct: 415 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 474
Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
+ GL +G +P + D IGVPSECLLLKNMFDPS ETE DFD D
Sbjct: 475 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 533
Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
G+L HI+V+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKF
Sbjct: 534 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 593
Query: 477 PST 485
P +
Sbjct: 594 PES 596
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 180 bits (457), Expect = 4e-43
Identities = 101/178 (56%), Positives = 113/178 (63%), Gaps = 18/178 (10%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTS---GQMLPGLT--- 167
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS+ G S P L
Sbjct: 377 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISSLAAPALVQGS 436
Query: 168 ---AAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX---------GR 311
AG + + ID +GVPSECLLLKNMFDPS +TE DFD D G
Sbjct: 437 FPAVAGLAGAGIIPGVIDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFGN 496
Query: 312 LKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
L HIYV+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKFP +
Sbjct: 497 LNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKFPES 554
>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 180 bits (457), Expect = 4e-43
Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
Frame = +3
Query: 6 DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS G Q S
Sbjct: 236 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 295
Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
+ GL +G +P + D IGVPSECLLLKNMFDPS ETE DFD D
Sbjct: 296 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 354
Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
G+L HI+V+KNS GFVYLRFEN LHGRWFAGKMITAT+M YEAKF
Sbjct: 355 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 414
Query: 477 PST 485
P +
Sbjct: 415 PES 417