BLASTX nr result

ID: Mentha26_contig00024806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00024806
         (752 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus...   216   7e-54
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu...   197   4e-48
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu...   196   7e-48
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   194   2e-47
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              194   2e-47
ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao] ...   190   4e-46
ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao] ...   190   4e-46
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   189   9e-46
ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutr...   187   3e-45
ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isofo...   185   2e-44
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isofo...   185   2e-44
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps...   184   4e-44
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag...   183   5e-44
gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis]               182   8e-44
ref|XP_007142808.1| hypothetical protein PHAVU_007G018500g [Phas...   181   2e-43
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice...   180   4e-43
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops...   180   4e-43
ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidops...   180   4e-43
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab...   180   4e-43
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]        180   4e-43

>gb|EYU37971.1| hypothetical protein MIMGU_mgv1a003198mg [Mimulus guttatus]
          Length = 600

 Score =  216 bits (550), Expect = 7e-54
 Identities = 118/174 (67%), Positives = 125/174 (71%), Gaps = 15/174 (8%)
 Frame = +3

Query: 3   ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQTSGQMLPGL 164
           AD DDD G+GLSLNA SRALLMQKLDRTGTASS        V     V GQTS  +LPGL
Sbjct: 425 ADFDDDGGSGLSLNAHSRALLMQKLDRTGTASSITGPPAAPVFGAPPVFGQTSVALLPGL 484

Query: 165 TAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX---------GRLK 317
            AAG +MPALT  +IDT GVPSECLLLKNMFDPS E EPDFDLD            GRLK
Sbjct: 485 AAAGLAMPALTASSIDT-GVPSECLLLKNMFDPSSEVEPDFDLDIKEDVQEECSKFGRLK 543

Query: 318 HIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFP 479
           HIYVEKNSAGFVYLRFEN          LHGRWFAGKMITAT+M+H DYEA+FP
Sbjct: 544 HIYVEKNSAGFVYLRFENTEAAMAAQRALHGRWFAGKMITATYMLHQDYEARFP 597


>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
           gi|550331684|gb|EEE86903.2| hypothetical protein
           POPTR_0009s13940g [Populus trichocarpa]
          Length = 599

 Score =  197 bits (500), Expect = 4e-48
 Identities = 108/188 (57%), Positives = 123/188 (65%), Gaps = 28/188 (14%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQT--------- 140
           D DDDEG GL+LNA+SRALLMQKLDRTGTASS           TA +LG           
Sbjct: 411 DFDDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGTPTLPTAPILGAAPAVSPAIAP 470

Query: 141 --SGQML--PGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX- 305
             SG +L  PGL  AG  +PA T+P ++TIGVPS+C+LLKNMFDP  ETEPDFDLD    
Sbjct: 471 LLSGSVLAIPGLPVAGLQLPATTIPTVETIGVPSDCILLKNMFDPKKETEPDFDLDIKED 530

Query: 306 --------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSD 461
                   G +KHI+V+KNSAGFVY+RFEN          LHGRWFAGKMITATFMV   
Sbjct: 531 VQEECSRFGNVKHIHVDKNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQT 590

Query: 462 YEAKFPST 485
           YEAKFP +
Sbjct: 591 YEAKFPDS 598


>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
           gi|550341316|gb|EEE86704.2| hypothetical protein
           POPTR_0004s18320g [Populus trichocarpa]
          Length = 609

 Score =  196 bits (498), Expect = 7e-48
 Identities = 107/188 (56%), Positives = 121/188 (64%), Gaps = 28/188 (14%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------VASTASVLGQT--------- 140
           D DDDEG GL+LNA+SRALLMQKLDRTGTASS           TA +LG T         
Sbjct: 421 DFDDDEGGGLALNARSRALLMQKLDRTGTASSIAGSLGTPTLPTAPILGATPVVSPAVAP 480

Query: 141 --SGQM--LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX- 305
             SG +  +PGL   G  +PA  +P +DTIGVPS+CL LKNMFDP  ETEPDFDLD    
Sbjct: 481 LLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKTETEPDFDLDIKED 540

Query: 306 --------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSD 461
                   G +KHIYV+KNSAGFVY+RFEN          LHGRWFAGK+ITATFMV   
Sbjct: 541 VQEECSRFGNVKHIYVDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQT 600

Query: 462 YEAKFPST 485
           YEAKFP +
Sbjct: 601 YEAKFPDS 608


>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  194 bits (494), Expect = 2e-47
 Identities = 111/195 (56%), Positives = 125/195 (64%), Gaps = 35/195 (17%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYGVA---------STASVLG---- 134
           D DDDEG GLSLNA+SRA+LMQKLDR+GT    A S G           STA +LG    
Sbjct: 414 DFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPV 473

Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
                    Q     L GL  AG  +PA+TVP+IDTIGVPSECL+LKNMFDP LETEPDF
Sbjct: 474 VSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDF 533

Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
           DLD            G +KHIYV+KNSAGFV+LRFEN          LHGRWFAGKMITA
Sbjct: 534 DLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITA 593

Query: 441 TFMVHSDYEAKFPST 485
           TFM+  +YEAKFP +
Sbjct: 594 TFMLPQNYEAKFPDS 608


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  194 bits (494), Expect = 2e-47
 Identities = 111/195 (56%), Positives = 125/195 (64%), Gaps = 35/195 (17%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGT----ASSYGVA---------STASVLG---- 134
           D DDDEG GLSLNA+SRA+LMQKLDR+GT    A S G           STA +LG    
Sbjct: 232 DFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPV 291

Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
                    Q     L GL  AG  +PA+TVP+IDTIGVPSECL+LKNMFDP LETEPDF
Sbjct: 292 VSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDF 351

Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
           DLD            G +KHIYV+KNSAGFV+LRFEN          LHGRWFAGKMITA
Sbjct: 352 DLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITA 411

Query: 441 TFMVHSDYEAKFPST 485
           TFM+  +YEAKFP +
Sbjct: 412 TFMLPQNYEAKFPDS 426


>ref|XP_007041785.1| Splicing factor isoform 4 [Theobroma cacao]
           gi|508705720|gb|EOX97616.1| Splicing factor isoform 4
           [Theobroma cacao]
          Length = 452

 Score =  190 bits (483), Expect = 4e-46
 Identities = 109/195 (55%), Positives = 124/195 (63%), Gaps = 34/195 (17%)
 Frame = +3

Query: 3   ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY----GVA--------STASVLG---- 134
           ADLDDDEG GLSLN+ SRALLM KLDR+GTASS     GVA        +TA+VLG    
Sbjct: 253 ADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAAPA 312

Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
                    Q   + + GL   G  +P+  +P IDTIG PSECLLLKNMFDP LETEPDF
Sbjct: 313 VPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKNMFDPDLETEPDF 372

Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
           DLD            G+LKHIYV+++SAGFVYLRFE+          LHGRWFA KMITA
Sbjct: 373 DLDIKEDVQEECSKFGKLKHIYVDRDSAGFVYLRFEDTQAAMSAQRNLHGRWFAAKMITA 432

Query: 441 TFMVHSDYEAKFPST 485
           TFMV   YEAKFP +
Sbjct: 433 TFMVPQTYEAKFPDS 447


>ref|XP_007041782.1| Splicing factor isoform 1 [Theobroma cacao]
           gi|590684187|ref|XP_007041783.1| Splicing factor isoform
           1 [Theobroma cacao] gi|508705717|gb|EOX97613.1| Splicing
           factor isoform 1 [Theobroma cacao]
           gi|508705718|gb|EOX97614.1| Splicing factor isoform 1
           [Theobroma cacao]
          Length = 581

 Score =  190 bits (483), Expect = 4e-46
 Identities = 109/195 (55%), Positives = 124/195 (63%), Gaps = 34/195 (17%)
 Frame = +3

Query: 3   ADLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY----GVA--------STASVLG---- 134
           ADLDDDEG GLSLN+ SRALLM KLDR+GTASS     GVA        +TA+VLG    
Sbjct: 382 ADLDDDEGGGLSLNSSSRALLMAKLDRSGTASSITGSVGVAGNSTGLTATTATVLGAAPA 441

Query: 135 ---------QTSGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDF 287
                    Q   + + GL   G  +P+  +P IDTIG PSECLLLKNMFDP LETEPDF
Sbjct: 442 VPSLVPPTLQAHVRTISGLPGVGLQLPSNGIPTIDTIGTPSECLLLKNMFDPDLETEPDF 501

Query: 288 DLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITA 440
           DLD            G+LKHIYV+++SAGFVYLRFE+          LHGRWFA KMITA
Sbjct: 502 DLDIKEDVQEECSKFGKLKHIYVDRDSAGFVYLRFEDTQAAMSAQRNLHGRWFAAKMITA 561

Query: 441 TFMVHSDYEAKFPST 485
           TFMV   YEAKFP +
Sbjct: 562 TFMVPQTYEAKFPDS 576


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score =  189 bits (480), Expect = 9e-46
 Identities = 106/194 (54%), Positives = 119/194 (61%), Gaps = 34/194 (17%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYG------------VASTASVLGQT--- 140
           D DDDEG GL+LNA+SRA+LMQKLDR+GTASS                 TA +LG     
Sbjct: 416 DFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLAVPTAPILGAAPVI 475

Query: 141 ----------SGQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFD 290
                     S    PGL  A   +P   +P++DTIGVPSECLLLKNMFDPS+ETEPDFD
Sbjct: 476 PPIVAPLISGSAPAFPGLPGASVQLPG-AIPSVDTIGVPSECLLLKNMFDPSIETEPDFD 534

Query: 291 LDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITAT 443
           LD            G L+HIYV+KNSAGFVYLRFEN          LHGRWFAGKMITAT
Sbjct: 535 LDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITAT 594

Query: 444 FMVHSDYEAKFPST 485
           FMV   YE KFP +
Sbjct: 595 FMVPQVYETKFPDS 608


>ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
           gi|557110532|gb|ESQ50823.1| hypothetical protein
           EUTSA_v10022624mg [Eutrema salsugineum]
          Length = 566

 Score =  187 bits (476), Expect = 3e-45
 Identities = 103/182 (56%), Positives = 120/182 (65%), Gaps = 22/182 (12%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTS--GQMLPGLTAAGF 179
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ +  S+ G  S    ++  L   GF
Sbjct: 384 DLDDDDGAGLSLNAQSRALLMQKLDRSGTASSTGLTAAGSIHGAASTISPLVAPLVQGGF 443

Query: 180 ----------SMPALTVPA-IDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------- 305
                     ++P + +PA +D +GVPSECLLLKNMFDPS ETEPDFDLD          
Sbjct: 444 PPVAGLAGVGNVPGVNMPAALDPVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVQEECS 503

Query: 306 --GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFP 479
             G L HI+V+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKFP
Sbjct: 504 KFGNLNHIFVDKNSVGFVYLRFENAQAAMGAQRALHGRWFAGKMITATYMTTETYEAKFP 563

Query: 480 ST 485
            +
Sbjct: 564 ES 565


>ref|XP_006589727.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Glycine max]
          Length = 421

 Score =  185 bits (469), Expect = 2e-44
 Identities = 103/180 (57%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVASTASVLGQTSGQM---- 152
           D DDDEG GLSLNA SRA+LMQKLDR+GTASS        GV +T   L  T   +    
Sbjct: 241 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAP 300

Query: 153 LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX--------- 305
           + GL   G  +P  T+P+ID IGVPSECL+LKNMFDP  ETEPDFDLD            
Sbjct: 301 VGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKF 360

Query: 306 GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
           G LKHIYV+K SAGFVYLRFE+          LHGRWFAGKMITA+FMV   YE KFP +
Sbjct: 361 GALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 420


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
          Length = 597

 Score =  185 bits (469), Expect = 2e-44
 Identities = 103/180 (57%), Positives = 116/180 (64%), Gaps = 20/180 (11%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY-------GVASTASVLGQTSGQM---- 152
           D DDDEG GLSLNA SRA+LMQKLDR+GTASS        GV +T   L  T   +    
Sbjct: 417 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAP 476

Query: 153 LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX--------- 305
           + GL   G  +P  T+P+ID IGVPSECL+LKNMFDP  ETEPDFDLD            
Sbjct: 477 VGGLAGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKF 536

Query: 306 GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
           G LKHIYV+K SAGFVYLRFE+          LHGRWFAGKMITA+FMV   YE KFP +
Sbjct: 537 GALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDS 596


>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
           gi|482568547|gb|EOA32736.1| hypothetical protein
           CARUB_v10016041mg [Capsella rubella]
          Length = 550

 Score =  184 bits (466), Expect = 4e-44
 Identities = 102/183 (55%), Positives = 117/183 (63%), Gaps = 23/183 (12%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS+ G              Q S
Sbjct: 366 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISPLAAPALLQGS 425

Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
              + GL  AG  +P +    +D +G+PSECLLLKNMFDPS ETEP FD D         
Sbjct: 426 FPAVAGLAGAGI-IPGVIPAVLDPVGIPSECLLLKNMFDPSTETEPHFDEDIKEDVKEEC 484

Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
              G+L HIYV+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKF
Sbjct: 485 SKFGQLDHIYVDKNSVGFVYLRFENTQAAMGAQRALHGRWFAGKMITATYMTTEVYEAKF 544

Query: 477 PST 485
           P +
Sbjct: 545 PES 547


>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
           vesca]
          Length = 588

 Score =  183 bits (465), Expect = 5e-44
 Identities = 102/185 (55%), Positives = 118/185 (63%), Gaps = 25/185 (13%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVAST----ASVLGQTSGQM------- 152
           D DDDEG GLSLNA+SRA+LMQKLDR+G+ SS  V ST    A +LG   G         
Sbjct: 403 DFDDDEGGGLSLNARSRAILMQKLDRSGSGSSLAVNSTGLPVAPILGAAPGISSLVAPMA 462

Query: 153 ----LPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPS-LETEPDFDLDXXX---- 305
               L GL   G  +P  TVP++DTIGVPSECLLL NMFDP  +E EPD D+D       
Sbjct: 463 SVPGLAGLGVPGLQIPTATVPSVDTIGVPSECLLLTNMFDPKEIEAEPDIDVDIKEDVQE 522

Query: 306 -----GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEA 470
                G+LKHI+V+KN+AGFVYLRFEN          LHGRWFAGKMITATFM   +YE 
Sbjct: 523 ECSKYGKLKHIFVDKNTAGFVYLRFENTQAAINARQVLHGRWFAGKMITATFMSPQNYET 582

Query: 471 KFPST 485
           KFP +
Sbjct: 583 KFPES 587


>gb|EXC16553.1| RNA-binding protein 39 [Morus notabilis]
          Length = 811

 Score =  182 bits (463), Expect = 8e-44
 Identities = 104/188 (55%), Positives = 124/188 (65%), Gaps = 32/188 (17%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTAS-----------SYGVA-STASVLGQT--- 140
           D DDD+G GL+LNA+SRALLMQKLDR+GTA+           S G+A  TA +LG     
Sbjct: 284 DFDDDDGGGLALNARSRALLMQKLDRSGTATNITGSPGTPAVSTGLALPTAPILGAAPVV 343

Query: 141 ---SGQMLP-----GLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLD 296
              S  + P     GL  AGF +PA+TVP+IDTIG PSECL LKNMFDP+ ETEP+FDLD
Sbjct: 344 SPLSASVAPIPALAGLGGAGFQVPAVTVPSIDTIGAPSECLQLKNMFDPAAETEPNFDLD 403

Query: 297 XXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFM 449
                       G L+HIYV+KNSAG+VYLRFE+          LHGRWFAGKMITA+FM
Sbjct: 404 IKEDVQDECSKFGNLQHIYVDKNSAGYVYLRFEHTQSAIAAQRALHGRWFAGKMITASFM 463

Query: 450 VHSDYEAK 473
           +  DYEA+
Sbjct: 464 LPQDYEAR 471


>ref|XP_007142808.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
           gi|561015998|gb|ESW14802.1| hypothetical protein
           PHAVU_007G018500g [Phaseolus vulgaris]
          Length = 603

 Score =  181 bits (459), Expect = 2e-43
 Identities = 103/188 (54%), Positives = 114/188 (60%), Gaps = 31/188 (16%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTSGQMLP--------- 158
           D DDDEG GLSLNA SRA+LMQKLDR+GTASS  V S  + +   +G  LP         
Sbjct: 413 DFDDDEGGGLSLNACSRAILMQKLDRSGTASSM-VGSLGNSVVSNTGLNLPATGNILAAV 471

Query: 159 -------------GLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDX 299
                        GL   G  +P  T+P+IDTIGVPSECL+LKNMFDP  ETEPDFDLD 
Sbjct: 472 PEGSPHSSIPAVSGLAGGGLQIPTATIPSIDTIGVPSECLMLKNMFDPKDETEPDFDLDI 531

Query: 300 XX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMV 452
                      G LKHIYV+K SAGFVYLRFE           LHGRWFAGKMITA+FMV
Sbjct: 532 KEDVEAECSKFGTLKHIYVDKKSAGFVYLRFEETQSAISAQRSLHGRWFAGKMITASFMV 591

Query: 453 HSDYEAKF 476
              YE KF
Sbjct: 592 PQSYEDKF 599


>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
          Length = 613

 Score =  180 bits (457), Expect = 4e-43
 Identities = 103/198 (52%), Positives = 116/198 (58%), Gaps = 38/198 (19%)
 Frame = +3

Query: 6    DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSY--------------------------- 104
            D+DDDEG GLSLNA SRALLMQKLDR+GTASS                            
Sbjct: 415  DIDDDEGGGLSLNASSRALLMQKLDRSGTASSMVGFLGNSAVNNTGVNLQATGNIPAGAL 474

Query: 105  -GVASTASVLGQTSG-QMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETE 278
             G A   S++   S    L GL   GF +P LT P+I+TIGVPSECLLL+NMFDP  E E
Sbjct: 475  LGAAPVGSLVSSLSSVPALAGLPGGGFQIPILTSPSIETIGVPSECLLLRNMFDPENEKE 534

Query: 279  PDFDLDXXX---------GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKM 431
            PDFD D            G L+HIYV+K SAGFVYLRFE+          LHGRWFAGKM
Sbjct: 535  PDFDFDVKEDVEAECSKFGNLQHIYVDKKSAGFVYLRFEDTQSAISAQRALHGRWFAGKM 594

Query: 432  ITATFMVHSDYEAKFPST 485
            ITA+FMV   YE KFP +
Sbjct: 595  ITASFMVPQSYEDKFPDS 612


>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 610

 Score =  180 bits (457), Expect = 4e-43
 Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS  G              Q S
Sbjct: 426 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 485

Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
              + GL  +G  +P +     D IGVPSECLLLKNMFDPS ETE DFD D         
Sbjct: 486 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 544

Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
              G+L HI+V+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKF
Sbjct: 545 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 604

Query: 477 PST 485
           P +
Sbjct: 605 PES 607


>ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251465|gb|AEC06559.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 599

 Score =  180 bits (457), Expect = 4e-43
 Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS  G              Q S
Sbjct: 415 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 474

Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
              + GL  +G  +P +     D IGVPSECLLLKNMFDPS ETE DFD D         
Sbjct: 475 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 533

Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
              G+L HI+V+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKF
Sbjct: 534 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 593

Query: 477 PST 485
           P +
Sbjct: 594 PES 596


>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
           lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
           ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  180 bits (457), Expect = 4e-43
 Identities = 101/178 (56%), Positives = 113/178 (63%), Gaps = 18/178 (10%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLGQTS---GQMLPGLT--- 167
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS+ G  S       P L    
Sbjct: 377 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASIHGGVSTISSLAAPALVQGS 436

Query: 168 ---AAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX---------GR 311
               AG +   +    ID +GVPSECLLLKNMFDPS +TE DFD D            G 
Sbjct: 437 FPAVAGLAGAGIIPGVIDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFGN 496

Query: 312 LKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKFPST 485
           L HIYV+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKFP +
Sbjct: 497 LNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKFPES 554


>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
          Length = 420

 Score =  180 bits (457), Expect = 4e-43
 Identities = 102/183 (55%), Positives = 115/183 (62%), Gaps = 23/183 (12%)
 Frame = +3

Query: 6   DLDDDEGNGLSLNAQSRALLMQKLDRTGTASSYGVASTASVLG--------------QTS 143
           DLDDD+G GLSLNAQSRALLMQKLDR+GTASS G+ + AS  G              Q S
Sbjct: 236 DLDDDDGGGLSLNAQSRALLMQKLDRSGTASSTGLTTAASFNGGVSTISSLAAPALVQGS 295

Query: 144 GQMLPGLTAAGFSMPALTVPAIDTIGVPSECLLLKNMFDPSLETEPDFDLDXXX------ 305
              + GL  +G  +P +     D IGVPSECLLLKNMFDPS ETE DFD D         
Sbjct: 296 FPAVAGLAGSGI-IPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEEC 354

Query: 306 ---GRLKHIYVEKNSAGFVYLRFENXXXXXXXXXXLHGRWFAGKMITATFMVHSDYEAKF 476
              G+L HI+V+KNS GFVYLRFEN          LHGRWFAGKMITAT+M    YEAKF
Sbjct: 355 SKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 414

Query: 477 PST 485
           P +
Sbjct: 415 PES 417


Top