BLASTX nr result

ID: Mentha26_contig00024525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00024525
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein ...    57   3e-06
ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein ...    57   3e-06
ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein ...    57   3e-06
ref|XP_004140427.1| PREDICTED: ribosomal RNA-processing protein ...    57   3e-06
ref|XP_002525955.1| conserved hypothetical protein [Ricinus comm...    56   6e-06

>ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/112 (34%), Positives = 57/112 (50%)
 Frame = +1

Query: 7   KKKRKSVKSINHFEESNEKNDASEQCNGIIEPEEQFQNSGGIIKGDTAKNTRXXXXXXXX 186
           +K +K+ KS N  + S E   A +     +E  + F+N G  +KG   K+++        
Sbjct: 44  RKNKKNRKSSNDCDNSLENGRAMQ-----LEACQPFEN-GAFLKGKAKKSSKKKRKDSSS 97

Query: 187 XXXXXRQLVSNHTSSDNLPETKDENADAEVYQMSSGDEDYSKGMKKWITQYH 342
                     +   S  L E  DEN   +VYQ+SSGD+D SKGMK+WIT+YH
Sbjct: 98  L---------DAKGSTELHEDIDEN---DVYQISSGDDDSSKGMKRWITEYH 137


>ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 1 [Cucumis sativus]
          Length = 268

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/112 (34%), Positives = 57/112 (50%)
 Frame = +1

Query: 7   KKKRKSVKSINHFEESNEKNDASEQCNGIIEPEEQFQNSGGIIKGDTAKNTRXXXXXXXX 186
           +K +K+ KS N  + S E   A +     +E  + F+N G  +KG   K+++        
Sbjct: 51  RKNKKNRKSSNDCDNSLENGRAMQ-----LEACQPFEN-GAFLKGKAKKSSKKKRKDSSS 104

Query: 187 XXXXXRQLVSNHTSSDNLPETKDENADAEVYQMSSGDEDYSKGMKKWITQYH 342
                     +   S  L E  DEN   +VYQ+SSGD+D SKGMK+WIT+YH
Sbjct: 105 L---------DAKGSTELHEDIDEN---DVYQISSGDDDSSKGMKRWITEYH 144


>ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/112 (34%), Positives = 57/112 (50%)
 Frame = +1

Query: 7   KKKRKSVKSINHFEESNEKNDASEQCNGIIEPEEQFQNSGGIIKGDTAKNTRXXXXXXXX 186
           +K +K+ KS N  + S E   A +     +E  + F+N G  +KG   K+++        
Sbjct: 44  RKNKKNRKSSNDCDNSLENGRAMQ-----LEACQPFEN-GAFLKGKAKKSSKKKRKDSSS 97

Query: 187 XXXXXRQLVSNHTSSDNLPETKDENADAEVYQMSSGDEDYSKGMKKWITQYH 342
                     +   S  L E  DEN   +VYQ+SSGD+D SKGMK+WIT+YH
Sbjct: 98  L---------DAKGSTELHEDIDEN---DVYQISSGDDDSSKGMKRWITEYH 137


>ref|XP_004140427.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 1 [Cucumis sativus]
          Length = 268

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/112 (34%), Positives = 57/112 (50%)
 Frame = +1

Query: 7   KKKRKSVKSINHFEESNEKNDASEQCNGIIEPEEQFQNSGGIIKGDTAKNTRXXXXXXXX 186
           +K +K+ KS N  + S E   A +     +E  + F+N G  +KG   K+++        
Sbjct: 51  RKNKKNRKSSNDCDNSLENGRAMQ-----LEACQPFEN-GAFLKGKAKKSSKKKRKDSSS 104

Query: 187 XXXXXRQLVSNHTSSDNLPETKDENADAEVYQMSSGDEDYSKGMKKWITQYH 342
                     +   S  L E  DEN   +VYQ+SSGD+D SKGMK+WIT+YH
Sbjct: 105 L---------DAKGSTELHEDIDEN---DVYQISSGDDDSSKGMKRWITEYH 144


>ref|XP_002525955.1| conserved hypothetical protein [Ricinus communis]
           gi|223534687|gb|EEF36379.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 308

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +1

Query: 232 DNLPETKDENADAEVYQMSSGDEDYSKGMKKWITQYH 342
           DN+ E + E  + EVYQ+SSG+ED SKGMKKWIT+YH
Sbjct: 147 DNILEKRQEPVNDEVYQISSGEEDCSKGMKKWITEYH 183


Top