BLASTX nr result

ID: Mentha26_contig00024049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00024049
         (320 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Mimulus...    70   1e-10
gb|EYU33253.1| hypothetical protein MIMGU_mgv1a001505mg [Mimulus...    65   7e-09
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    59   9e-07

>gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Mimulus guttatus]
          Length = 777

 Score = 70.5 bits (171), Expect(2) = 1e-10
 Identities = 39/58 (67%), Positives = 43/58 (74%), Gaps = 7/58 (12%)
 Frame = +2

Query: 167 SPSVSLHFSTAHNPFRLFSS-------RPNSIVGPSISFVPSAVATPNSSLLSEEAFR 319
           +P +SLHFSTAH PFR FSS       R  +  G SISFVPSAVATPNSS+LSEEAFR
Sbjct: 44  APPLSLHFSTAHYPFRAFSSSSAAAAARLKNGAGASISFVPSAVATPNSSVLSEEAFR 101



 Score = 20.8 bits (42), Expect(2) = 1e-10
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 130 QPLSRELQK 156
           QP+SRELQK
Sbjct: 30  QPISRELQK 38


>gb|EYU33253.1| hypothetical protein MIMGU_mgv1a001505mg [Mimulus guttatus]
          Length = 806

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = +2

Query: 104 LGVPSIGRANPSLENCRKPTPSPSVSLHFSTAHNPFRLFSSRPNS-IVGPSISFVPSAVA 280
           +GV S+ + NP+ ++ +    +  +S HFSTAHNPFR FSS   + +   S S V SAV 
Sbjct: 6   IGVSSVYQTNPAADHPKPSNSAAPLSFHFSTAHNPFRYFSSSSAARLKSASKSLVTSAVF 65

Query: 281 TPNSSLLSEEAFR 319
            PNSS+LSEEAF+
Sbjct: 66  APNSSVLSEEAFK 78


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Solanum tuberosum]
          Length = 744

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/72 (48%), Positives = 45/72 (62%)
 Frame = +2

Query: 104 LGVPSIGRANPSLENCRKPTPSPSVSLHFSTAHNPFRLFSSRPNSIVGPSISFVPSAVAT 283
           +GV SI + NPSLE  R+PT +P +SL FST  + F +        V     F+ SAV T
Sbjct: 8   IGVSSIYQTNPSLELSRRPTATPPLSLPFSTEKSNFHVH-------VRLRRPFLASAVVT 60

Query: 284 PNSSLLSEEAFR 319
           PNSS+LSEEAF+
Sbjct: 61  PNSSVLSEEAFK 72


Top