BLASTX nr result

ID: Mentha26_contig00023592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00023592
         (793 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314911.1| pentatricopeptide repeat-containing family p...    60   7e-07
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...    57   8e-06

>ref|XP_002314911.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222863951|gb|EEF01082.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 743

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 26/59 (44%), Positives = 40/59 (67%)
 Frame = +3

Query: 375 NDLITGHYTRNNSTYESYVFDQMRKQNSFYWNTILSVYPKQGDVASMNKMFTSITRKDG 551
           N+LI  +    N TY  +VFD+M + NSF WNT+LS Y K GD+++M ++F+ +  +DG
Sbjct: 44  NNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDG 102


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 39/61 (63%)
 Frame = +3

Query: 369 ITNDLITGHYTRNNSTYESYVFDQMRKQNSFYWNTILSVYPKQGDVASMNKMFTSITRKD 548
           ++N+LIT +Y   N  Y  +VFD + + N F WNTILSVY K G ++ M ++F  +  +D
Sbjct: 42  LSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRD 101

Query: 549 G 551
           G
Sbjct: 102 G 102


Top