BLASTX nr result

ID: Mentha26_contig00023377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00023377
         (662 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU24936.1| hypothetical protein MIMGU_mgv1a009918mg [Mimulus...    73   9e-11
ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254...    64   6e-08
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...    62   2e-07
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s...    61   4e-07

>gb|EYU24936.1| hypothetical protein MIMGU_mgv1a009918mg [Mimulus guttatus]
          Length = 327

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
 Frame = -2

Query: 250 MDPDPPSPSGRKVKFAPKGP----PXXXXXXXXXXXXEDGSDENDSQQFLARRVAEHLAR 83
           MDPDPP  + RKV+FAPK P    P             D +D+ ++Q+FL R+V EHLAR
Sbjct: 1   MDPDPPKAAPRKVRFAPKEPRRRTPKPSSFKIEPAPEVDDTDDLEAQEFLTRKVKEHLAR 60

Query: 82  QG-GKAEKKSPVRVTFSHGVAATSIRSF 2
           +G  K+E K  V+V FS+ V ++SIR+F
Sbjct: 61  RGRPKSENKGRVQVAFSNDVGSSSIRTF 88


>ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254492 [Solanum
           lycopersicum]
          Length = 373

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
 Frame = -2

Query: 250 MDPDPP--SPSGRKVKFAPKGPPXXXXXXXXXXXXE-DGS---DENDSQQFLARRVAEHL 89
           MDPD P  S S RKVKFAPKGPP            E DG+   D+N++ + + R+V E L
Sbjct: 1   MDPDLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAVLRKVNERL 60

Query: 88  ARQGGKAEKKSPVRVTFSHGVAA 20
            RQ  K EKK+ V V F+HGVA+
Sbjct: 61  TRQKPKTEKKAAVEVAFAHGVAS 83


>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
           gi|223550094|gb|EEF51581.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 328

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
 Frame = -2

Query: 250 MDPDPPSPSGRKVKFAPKGPPXXXXXXXXXXXXEDGSDENDSQ----QFLARRVAEHLAR 83
           MD + PSPS RKVKF PK P              +G D N+ +    Q L R+  E+  R
Sbjct: 1   MDDEQPSPSQRKVKFTPKAPSQRRPRRTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFRR 60

Query: 82  QGGKAEKKSPVRVTFSHG-VAATSIRSF 2
           QG + EKKS V+V F  G  ++TSIR+F
Sbjct: 61  QGPRVEKKSTVQVAFGPGATSSTSIRTF 88


>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           [Solanum tuberosum]
          Length = 368

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
 Frame = -2

Query: 250 MDPDPP--SPSGRKVKFAPKGPP-XXXXXXXXXXXXEDGS---DENDSQQFLARRVAEHL 89
           MDPD P  S S RKVKFAPKGPP              DG+   D+N++ + + R+V E L
Sbjct: 1   MDPDLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAILRKVNERL 60

Query: 88  ARQGGKAEKKSPVRVTFSHGVAA-TSIRSF 2
            RQ  K EKK  V V F+HGVA+ TS ++F
Sbjct: 61  TRQKPKTEKK--VEVAFTHGVASPTSTKTF 88


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