BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00023351
         (506 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   166   3e-39
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   162   3e-38
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun...   161   8e-38
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   158   9e-37
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   157   1e-36
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   157   1e-36
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   154   9e-36
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   154   9e-36
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   154   9e-36
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   154   9e-36
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus...   154   1e-35
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr...   154   1e-35
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise...   154   2e-35
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps...   154   2e-35
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   152   4e-35
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   152   4e-35
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I...   152   5e-35
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I...   152   6e-35
ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, I...   150   1e-34
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   150   1e-34

>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  166 bits (420), Expect = 3e-39
 Identities = 85/157 (54%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL ++E KRL R RKTV+++L+DRGY V + ++ M   QF  KY EN+KR DL+I++T 
Sbjct: 1   MVLSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D SDQIYVFF D+ K  +GVK ++   N+MK  NV RA++V ++ L+P AR CINE+S
Sbjct: 61  RNDNSDQIYVFFPDEAK--VGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VN+ +H L+P+HQ+LT EEKK+L
Sbjct: 119 SKFHLEVFQESELLVNVKEHSLVPEHQVLTNEEKKTL 155


>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  162 bits (411), Expect = 3e-38
 Identities = 85/157 (54%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           M L EEE KRL R RKTV+++L+DRGY V + +++M   QF+ KY  N+KR DL+I++T 
Sbjct: 1   MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D SDQIYVFF ++ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CINE+S
Sbjct: 61  RNDSSDQIYVFFPEEAK--VGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +H L+P+HQ+L+ EEKK+L
Sbjct: 119 TKFHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTL 155


>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
           gi|462416214|gb|EMJ20951.1| hypothetical protein
           PRUPE_ppa024345mg [Prunus persica]
          Length = 206

 Score =  161 bits (408), Expect = 8e-38
 Identities = 83/157 (52%), Positives = 117/157 (74%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL EEE  RL+R R+TV+++LRDR Y V + ++ M   QF  KY EN+KR DL I++T 
Sbjct: 1   MVLPEEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D +DQ+YVFF ++ K  +GVK I+   N+MK +NV+RAI+V ++ ++P AR CI+E+S
Sbjct: 61  RNDSTDQLYVFFPEEPK--VGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FH+EVF E ELMVN+++H L+P+HQLLT EEKK+L
Sbjct: 119 SKFHMEVFQEPELMVNVTEHVLVPEHQLLTNEEKKTL 155


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  158 bits (399), Expect = 9e-37
 Identities = 84/157 (53%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDET- 214
           M L +EE KRL R R+TV+++LRDRGY V + ++ M+  QF  K+ EN+KR DL+I++  
Sbjct: 1   MTLSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKAL 60

Query: 215 NGDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D SDQIYVFF D+ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CI E+S
Sbjct: 61  RNDSSDQIYVFFPDEQK--VGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 AKFHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTL 155


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  157 bits (398), Expect = 1e-36
 Identities = 84/158 (53%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDET- 214
           MVL EEE  RL R RKTV ++LRDRGY V + +++M   QF +KY EN+KR D++I+++ 
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 215 NGDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINE-L 391
             D SDQIYVFF ++ K  +G+KP++    +MK  NV RAI+V ++ L+P AR C++E  
Sbjct: 61  RNDSSDQIYVFFPEEAK--VGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEAT 118

Query: 392 SKIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
           SK FHLEVF E EL+VNI  H L+P+HQLL  EEKK+L
Sbjct: 119 SKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTL 156


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  157 bits (398), Expect = 1e-36
 Identities = 83/157 (52%), Positives = 115/157 (73%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL EEE  RL+R RKTV+++LRDRG+ V + ++ M+  +F  KY E++KR DL+I+++ 
Sbjct: 1   MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 218 GDGS-DQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
            D S DQIYVFF D+ K  +GVK ++   N+M   NV RAI+V +  L+P AR CI+E+S
Sbjct: 61  KDNSGDQIYVFFPDEPK--VGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +HEL+P+HQ+LT  EKK+L
Sbjct: 119 SKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL 155


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  154 bits (390), Expect = 9e-36
 Identities = 81/157 (51%), Positives = 112/157 (71%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MV  EEE  RL+R RKTV+++L+DR Y V + ++ M   QF  KY EN+KR DL I++T 
Sbjct: 1   MVYPEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D SDQIYVFF ++ K  +GVK ++   N+MK  NV RA++V ++ L+P A+ CI+E+S
Sbjct: 61  RSDSSDQIYVFFPEEPK--VGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +H L+P+H +LT EEKK+L
Sbjct: 119 SKFHLEVFQEAELLVNIKEHVLVPEHLVLTTEEKKTL 155


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  154 bits (390), Expect = 9e-36
 Identities = 78/156 (50%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
 Frame = +2

Query: 41  VLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLM-IDETN 217
           +L EEE KRL+R +KT++++LRDRGY +A+ ++ M   QF  K+ +N+KR DL+ +    
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60

Query: 218 GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELSK 397
            D SDQ+Y+FF D+ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CI+E+S 
Sbjct: 61  NDNSDQLYIFFPDEAK--VGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISS 118

Query: 398 IFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
            FHLEVF E E++VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 KFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTL 154


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  154 bits (390), Expect = 9e-36
 Identities = 82/157 (52%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL EEE  RL+R RKTV+++LRDR + V + ++ M+  +F  KY E++KR DL+I+++ 
Sbjct: 1   MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60

Query: 218 GDGS-DQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
            D S DQIYVFF D+ K  +GVK ++   N+M   NV RAI+V +  L+P AR CI+E+S
Sbjct: 61  KDNSGDQIYVFFPDEPK--VGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +HEL+P+HQ+LT  EKK+L
Sbjct: 119 SKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTL 155


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  154 bits (390), Expect = 9e-36
 Identities = 82/153 (53%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
 Frame = +2

Query: 50  EEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETNG-DG 226
           EEE  RL R RKTV+++L+DRGY V + ++ M   QF  K+ EN+KR DL+I++    D 
Sbjct: 5   EEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDS 64

Query: 227 SDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELSKIFH 406
           SDQIYVFF ++ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CINE+S  FH
Sbjct: 65  SDQIYVFFPEEQK--VGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122

Query: 407 LEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
           LEVF E EL+VNI +H L+P+HQ+LT EEKK+L
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTL 155


>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
          Length = 206

 Score =  154 bits (389), Expect = 1e-35
 Identities = 77/157 (49%), Positives = 116/157 (73%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDE-T 214
           MVL +EE  RL R RK V+++L+DRGY V + +++M   QF +KY EN+KR DL+I++  
Sbjct: 1   MVLSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGL 60

Query: 215 NGDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             + SDQIY+FF ++ K  +GVK ++   N+MK+  V RA+++ ++ L+P AR CI+E+S
Sbjct: 61  RNNSSDQIYIFFPEEPK--VGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E E+++NI +H L+P+HQ+LTPEEKK+L
Sbjct: 119 TKFHLEVFQEAEMLINIKEHVLVPEHQVLTPEEKKTL 155


>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
           gi|557107329|gb|ESQ47636.1| hypothetical protein
           EUTSA_v10021534mg [Eutrema salsugineum]
          Length = 206

 Score =  154 bits (389), Expect = 1e-35
 Identities = 77/157 (49%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLM-IDET 214
           M L EEE KRL+R +KT++++L+DRGY +A+ ++ M   QF  K+ +N+KR DL+ +   
Sbjct: 1   MTLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAK 60

Query: 215 NGDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D +DQ+Y+FF D+ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CI+E+S
Sbjct: 61  RNDNNDQLYIFFPDEAK--VGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E E++VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 SKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTL 155


>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
          Length = 208

 Score =  154 bits (388), Expect = 2e-35
 Identities = 79/159 (49%), Positives = 116/159 (72%), Gaps = 2/159 (1%)
 Frame = +2

Query: 35  KMVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGD-LMIDE 211
           +M+L EE+  RL+R RKT++++L+DRGY V + ++EM  +QF +KY EN+KR D  ++  
Sbjct: 1   RMILSEEQITRLYRIRKTLMQMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKG 60

Query: 212 TNGDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINE- 388
              + SDQIYVFF ++ K  +GVKPI+   N+MK+  + +AI+V ++ L+P AR CI E 
Sbjct: 61  LRNNPSDQIYVFFPEEPK--VGVKPIKAYTNKMKEEGIHKAILVVQQNLTPIARSCITET 118

Query: 389 LSKIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
           +S  FHLEVF E EL++NI  H L+P+HQLL+PEEKK+L
Sbjct: 119 ISSKFHLEVFQEAELLINIKDHVLVPEHQLLSPEEKKTL 157


>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
           gi|482567281|gb|EOA31470.1| hypothetical protein
           CARUB_v10014656mg [Capsella rubella]
          Length = 205

 Score =  154 bits (388), Expect = 2e-35
 Identities = 77/156 (49%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = +2

Query: 41  VLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLM-IDETN 217
           +L EEE KRL+R  KT++++L+DRGY +A+ ++ +   QF  KY +N+KR DL+ +    
Sbjct: 1   MLTEEEIKRLYRIHKTLMQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKR 60

Query: 218 GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELSK 397
            D SDQ+Y+FF D+ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CI+E+S 
Sbjct: 61  NDNSDQLYIFFPDEAK--VGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISS 118

Query: 398 IFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
            FHLEVF E E++VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 KFHLEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTL 154


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  152 bits (385), Expect = 4e-35
 Identities = 81/157 (51%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL E+E  RL R R+TV+++LRDR Y V + ++ M   QF  KY EN+KR DL+I+++ 
Sbjct: 1   MVLSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSR 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             D  DQIYVFF ++ K  +GVK ++   N+MK  NV RA++V ++ L+P AR CI+E+S
Sbjct: 61  RNDSPDQIYVFFPEEQK--VGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 TKFHLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTL 155


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  152 bits (385), Expect = 4e-35
 Identities = 77/156 (49%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
 Frame = +2

Query: 41  VLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLM-IDETN 217
           +L EEE KRL+R +KT++++L+DRGY +A+ ++ M   QF  K+ +N+KR DL+ +    
Sbjct: 1   MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKR 60

Query: 218 GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELSK 397
            D SDQ+Y+FF D+ K  +GVK ++   N+MK  NV RAI+V ++ L+P AR CI+E+S 
Sbjct: 61  NDNSDQLYIFFPDEAK--VGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISS 118

Query: 398 IFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
            FHLEVF E E++VNI +H L+P+HQ+LT EEKK+L
Sbjct: 119 KFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTL 154


>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 208

 Score =  152 bits (384), Expect = 5e-35
 Identities = 82/159 (51%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDET- 214
           MVL EEE  RL R RKTV ++LRDRGY V + +++M   QF +KY EN+KR D++I+++ 
Sbjct: 1   MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK 60

Query: 215 NGDGSDQIYV-FFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINE- 388
             D SDQ+Y+ FF ++ K  +G+KP++    +MK  NV RAI+V ++ L+P AR C++E 
Sbjct: 61  RNDSSDQVYICFFPEEAK--VGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEA 118

Query: 389 LSKIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
            SK FHLEVF E EL+VNI  H L+P+HQLL  EEKK+L
Sbjct: 119 TSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTL 157


>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score =  152 bits (383), Expect = 6e-35
 Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MV  EEE  RL+R RKTV+ +LRDR Y V + +V M+  +F EKY EN+KR DL+I++T 
Sbjct: 1   MVFPEEEITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKTK 60

Query: 218 GDG-SDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
            D  SDQIYVFF ++ K  +GVK ++   N+M   NV RAI+V +  L+P AR CI E+S
Sbjct: 61  KDKPSDQIYVFFPEEVK--VGVKTMKTYTNRMNSENVYRAILVCQTSLTPFARTCIAEVS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E EL+VNI +H L+P+HQ+LT  EKK+L
Sbjct: 119 SKFHLEVFQEAELLVNIKEHVLVPEHQVLTETEKKTL 155


>ref|XP_004307246.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Fragaria vesca subsp. vesca]
          Length = 206

 Score =  150 bits (380), Expect = 1e-34
 Identities = 78/157 (49%), Positives = 111/157 (70%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           MVL EEE  RL+R RKTV+++L+DR Y + + D+ M  +QF  KY E++KR DL I+   
Sbjct: 1   MVLTEEEIMRLYRVRKTVMQMLKDRDYLIVDHDLNMTMSQFKNKYGEHMKREDLTINRRK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
            GD SDQIYVFF D+ K  +GVK ++    +M Q NV RAI+V ++ L+P A+  I+E+ 
Sbjct: 61  RGDESDQIYVFFPDEPK--VGVKTMKSYITRMNQENVIRAILVAQQNLTPFAKTSISEMG 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             +HLE+F E EL+VNI +H L+P+H++LT EEKK+L
Sbjct: 119 SKYHLEIFQEAELLVNIKEHVLVPEHRVLTNEEKKTL 155


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  150 bits (380), Expect = 1e-34
 Identities = 79/157 (50%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
 Frame = +2

Query: 38  MVLLEEERKRLHRARKTVLEILRDRGYSVANDDVEMNWTQFDEKYTENLKRGDLMIDETN 217
           M L EEE  +L R RKT++E+L DRGY V + ++ M+  QF +KY EN+KR DL+I +  
Sbjct: 1   MALSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAK 60

Query: 218 -GDGSDQIYVFFVDDGKTTIGVKPIREIANQMKQNNVSRAIIVGKKVLSPAARGCINELS 394
             + SDQIYVFF ++ K  +GVK ++    +MK+ +V +AI++ ++ L+P AR CI+E+S
Sbjct: 61  RNNSSDQIYVFFPEEPK--VGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEIS 118

Query: 395 KIFHLEVFLEDELMVNISKHELIPKHQLLTPEEKKSL 505
             FHLEVF E E++VNI  H LIP+HQLL+PEEKK+L
Sbjct: 119 TKFHLEVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTL 155