BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021733
         (655 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...   387   e-105
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   369   e-100
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   369   e-100
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]            369   e-100
emb|CAJ13818.1| DNA-dependent RNA polymerase 1 [Chrysanthemum x ...   369   e-100
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   366   4e-99
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   363   3e-98
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       362   6e-98
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   361   1e-97
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   360   2e-97
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   359   5e-97
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              359   5e-97
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   359   5e-97
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   358   8e-97
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   358   1e-96
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr...   354   2e-95
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal...   350   2e-94
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   350   2e-94
dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol...   350   2e-94
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   350   2e-94

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score =  387 bits (993), Expect = e-105
 Identities = 186/218 (85%), Positives = 197/218 (90%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L VVEN+WAAGG++AGLVNRE++PIPELL S+D KE            KINQERHSQRCD
Sbjct: 437  LTVVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWKWSVRKVKKINQERHSQRCD 496

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 497  TELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSG 556

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIH+ANLYGGGVEKLSYD RV+FVENNI+EI DSADNSLNGNRWWLKAEDPFQCLA
Sbjct: 557  LRWLKIHVANLYGGGVEKLSYDDRVAFVENNISEIFDSADNSLNGNRWWLKAEDPFQCLA 616

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINL EALKS SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 617  ACINLVEALKSPSPHTVISHLPIHQDGSCNGLQHYAAL 654


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic; AltName:
            Full=NsRpoT-C; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 3; Flags: Precursor
            gi|59800203|sp|P69243.1|RPO3A_TOBAC RecName:
            Full=DNA-directed RNA polymerase 3A, chloroplastic;
            AltName: Full=NictaRpoT3-syl; AltName: Full=T7
            bacteriophage-type single subunit RNA polymerase 3A;
            Flags: Precursor gi|21425641|emb|CAC82576.3| phage-type
            RNA polymerase [Nicotiana sylvestris]
            gi|21425679|emb|CAC95027.2| plastid RNA polymerase
            [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 977

 Score =  369 bits (948), Expect = e-100
 Identities = 175/217 (80%), Positives = 193/217 (88%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
            L+VVE++WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD 
Sbjct: 474  LSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDT 533

Query: 473  ELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGL 294
            ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGL
Sbjct: 534  ELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL 593

Query: 293  RWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAA 114
            RWLKIHLA+LY GG+EKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAA
Sbjct: 594  RWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAA 653

Query: 113  CINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            CINLSEALKSSSPHTV SHLPIHQDGSCNGLQHYAAL
Sbjct: 654  CINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAAL 690


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic; AltName:
            Full=NictaRpoT3-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 3B; Flags: Precursor
            gi|21425667|emb|CAC95021.2| chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 977

 Score =  369 bits (947), Expect = e-100
 Identities = 178/218 (81%), Positives = 194/218 (88%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            LNVVE++WA GG++AGLV+R++VPIPEL  SDD  E+           KINQE HSQRCD
Sbjct: 473  LNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCD 532

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSG
Sbjct: 533  TELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSG 592

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLA+LY GGVEKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLA
Sbjct: 593  LRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLA 652

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 653  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 690


>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
          Length = 557

 Score =  369 bits (947), Expect = e-100
 Identities = 178/218 (81%), Positives = 194/218 (88%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 LNVVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
           LNVVE++WA GG++AGLV+R++VPIPEL  SDD  E+           KINQE HSQRCD
Sbjct: 56  LNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCD 115

Query: 476 VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
            ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSG
Sbjct: 116 TELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSG 175

Query: 296 LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
           LRWLKIHLA+LY GGVEKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLA
Sbjct: 176 LRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLA 235

Query: 116 ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
           ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 236 ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 273


>emb|CAJ13818.1| DNA-dependent RNA polymerase 1 [Chrysanthemum x morifolium]
          Length = 383

 Score =  369 bits (946), Expect = e-100
 Identities = 175/218 (80%), Positives = 194/218 (88%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
           LNVVE++WAAGGD+AGLVNR++V IP+L S+D  EI           K+NQE HSQRCD+
Sbjct: 56  LNVVESIWAAGGDIAGLVNRQDVSIPDLNSEDSSEIKEWRWSVRKAKKMNQELHSQRCDI 115

Query: 473 ELKLSV-ARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
           ELKLSV AR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSG
Sbjct: 116 ELKLSVVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSG 175

Query: 296 LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
           LRWL+IHLANLYG GVEKLSYD R++FVE++I+EI+DSADN L GNRWWL AEDPFQCLA
Sbjct: 176 LRWLRIHLANLYGSGVEKLSYDGRLAFVESHISEIIDSADNPLGGNRWWLTAEDPFQCLA 235

Query: 116 ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
           ACINL+E LKSSSPHTVISHLP+HQDGSCNGLQHYAAL
Sbjct: 236 ACINLAETLKSSSPHTVISHLPVHQDGSCNGLQHYAAL 273


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            tuberosum]
          Length = 1015

 Score =  366 bits (939), Expect = 4e-99
 Identities = 173/217 (79%), Positives = 191/217 (88%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
            L+VVE++WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD 
Sbjct: 512  LSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDT 571

Query: 473  ELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGL 294
            ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGL
Sbjct: 572  ELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL 631

Query: 293  RWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAA 114
            RWLK+HLA+LY GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAA
Sbjct: 632  RWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAA 691

Query: 113  CINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            CINLSEALKS SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 692  CINLSEALKSPSPHTVISHLPIHQDGSCNGLQHYAAL 728


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Solanum
            lycopersicum]
          Length = 1007

 Score =  363 bits (931), Expect = 3e-98
 Identities = 171/217 (78%), Positives = 190/217 (87%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
            L+VVE +WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD 
Sbjct: 504  LSVVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDT 563

Query: 473  ELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGL 294
            ELKLSVAR ++DEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGL
Sbjct: 564  ELKLSVARKLRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGL 623

Query: 293  RWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAA 114
            RWLK+HLA+LY GG+EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAA
Sbjct: 624  RWLKVHLASLYAGGIEKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAA 683

Query: 113  CINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            CINLSEA+KS SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 684  CINLSEAVKSLSPHTVISHLPIHQDGSCNGLQHYAAL 720


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  362 bits (929), Expect = 6e-98
 Identities = 172/217 (79%), Positives = 190/217 (87%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
            L+VVE++WAAGG++AGLVNRE+VP+PEL SDD  EI           K N E HS RCD 
Sbjct: 449  LSVVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKNNMEMHSLRCDT 508

Query: 473  ELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGL 294
            ELKLSVAR MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGILEF++GRPLGKSGL
Sbjct: 509  ELKLSVARAMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGILEFSEGRPLGKSGL 568

Query: 293  RWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAA 114
             WLK+HLANL+GGGV+KL YD R+SFVENNI E+ DSADN L+GNRWWLKAEDPFQ LAA
Sbjct: 569  YWLKLHLANLFGGGVQKLPYDERLSFVENNITEVFDSADNPLSGNRWWLKAEDPFQFLAA 628

Query: 113  CINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            CIN+SEAL+SSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 629  CINISEALRSSSPHTVISHLPIHQDGSCNGLQHYAAL 665


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  361 bits (927), Expect = 1e-97
 Identities = 172/218 (78%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            LNVVE++WA GG++AGLV+RE+VP+PE   S+D  EI           K+NQERHSQRCD
Sbjct: 469  LNVVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCD 528

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR MKDE+GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 529  TELKLSVARRMKDEDGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSG 588

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLANLY GGVEKLSYD R+SFV+N+I +I DSA N +NGNRWWL AEDP QCLA
Sbjct: 589  LRWLKIHLANLYSGGVEKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLA 648

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEAL S SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 649  ACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAAL 686


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
            gi|462398756|gb|EMJ04424.1| hypothetical protein
            PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  360 bits (925), Expect = 2e-97
 Identities = 172/218 (78%), Positives = 190/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE++WA GG++AGLVNRE+VP+P+   S+D KEI           KINQERHSQRCD
Sbjct: 472  LSVVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCD 531

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 532  TELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSG 591

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLANLY GGVEKLSY+ R++FV+N+I +I DSA N +NGNRWWL AEDP QCLA
Sbjct: 592  LRWLKIHLANLYAGGVEKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLA 651

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEAL S SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 652  ACINLSEALNSPSPHTVISHLPIHQDGSCNGLQHYAAL 689


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Citrus
            sinensis]
          Length = 1009

 Score =  359 bits (921), Expect = 5e-97
 Identities = 169/218 (77%), Positives = 193/218 (88%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+V+E++W +GG++AGLV+R +VPIPE  LS+D  E+           KINQERHSQRCD
Sbjct: 505  LSVLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCD 564

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSG
Sbjct: 565  TELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSG 624

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLANL+ GGVEKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLA
Sbjct: 625  LRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLA 684

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEALKSSSPH+VISHLPIHQDGSCNGLQHYAAL
Sbjct: 685  ACINLSEALKSSSPHSVISHLPIHQDGSCNGLQHYAAL 722


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  359 bits (921), Expect = 5e-97
 Identities = 171/218 (78%), Positives = 190/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 LNVVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCD 477
           L+VVE++WA GG++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD
Sbjct: 304 LSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCD 363

Query: 476 VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
            E+KLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 364 TEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSG 423

Query: 296 LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
           LRWLKI LANLY GGVEKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLA
Sbjct: 424 LRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLA 483

Query: 116 ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
           ACINLSEAL+SSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 484 ACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAAL 521


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
            vinifera]
          Length = 979

 Score =  359 bits (921), Expect = 5e-97
 Identities = 171/218 (78%), Positives = 190/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE++WA GG++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD
Sbjct: 475  LSVVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCD 534

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             E+KLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 535  TEIKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSG 594

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKI LANLY GGVEKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLA
Sbjct: 595  LRWLKIQLANLYAGGVEKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLA 654

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEAL+SSSPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 655  ACINLSEALRSSSPHTVISHLPIHQDGSCNGLQHYAAL 692


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
            gi|222854390|gb|EEE91937.1| hypothetical protein
            POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  358 bits (919), Expect = 8e-97
 Identities = 172/218 (78%), Positives = 190/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE +WA+GG+ AGLVNR ++PIPE LS DD  EI           KINQERHSQRCD
Sbjct: 478  LDVVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCD 537

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEFA+GRPLGKSG
Sbjct: 538  TELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFAEGRPLGKSG 597

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            L WLKIHLANLY GGVEKLS+D R++FVEN+++EI DSA+N +NG RWWL AEDPFQCLA
Sbjct: 598  LCWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAENPVNGKRWWLTAEDPFQCLA 657

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEALKS+SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 658  ACINLSEALKSASPHTVISHLPIHQDGSCNGLQHYAAL 695


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 882

 Score =  358 bits (918), Expect = 1e-96
 Identities = 170/218 (77%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE +W +GG++AGLV+RE++PIPE   SDD  EI           KINQERHSQRCD
Sbjct: 378  LDVVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCD 437

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR +KDEEGFYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEF +GRPLGKSG
Sbjct: 438  TELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSG 497

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLANLY GGVEKLS+D R++FVEN+++EI DSA N +NG RWWLKAEDPFQCLA
Sbjct: 498  LRWLKIHLANLYSGGVEKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLA 557

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINLSEAL S+SPHTVISHLPIHQDGSCNGLQHYAAL
Sbjct: 558  ACINLSEALNSASPHTVISHLPIHQDGSCNGLQHYAAL 595


>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
            gi|557556792|gb|ESR66806.1| hypothetical protein
            CICLE_v10007333mg [Citrus clementina]
          Length = 1012

 Score =  354 bits (908), Expect = 2e-95
 Identities = 167/218 (76%), Positives = 192/218 (88%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+V+E++W +GG++AGLV+R +V IPE  LS+D  E+           KINQERHSQRCD
Sbjct: 508  LSVLESIWVSGGNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCD 567

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
             ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSG
Sbjct: 568  TELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSG 627

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            LRWLKIHLANL+ GGVEKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLA
Sbjct: 628  LRWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLA 687

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            ACINL+EALKSSSPH+VISHLPIHQDGSCNGLQHYAAL
Sbjct: 688  ACINLAEALKSSSPHSVISHLPIHQDGSCNGLQHYAAL 725


>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase 3
            [Arabidopsis thaliana]
          Length = 895

 Score =  350 bits (899), Expect = 2e-94
 Identities = 167/218 (76%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE LWA GG++AGLVNRE+VPIPE   S+D +E+           KIN+ERHS RCD
Sbjct: 489  LDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCD 548

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
            VELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSG
Sbjct: 549  VELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSG 608

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            L WLKIHLANLY GGVEKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLA
Sbjct: 609  LHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLA 668

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            AC+ L++ALKS SP++VISHLPIHQDGSCNGLQHYAAL
Sbjct: 669  ACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAAL 706


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
            gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
            Full=DNA-directed RNA polymerase 3, chloroplastic; Flags:
            Precursor gi|2330560|emb|CAA69972.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|2330564|emb|CAA69717.1| chloroplast
            single-subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|110739160|dbj|BAF01496.1| chloroplast single
            subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
            polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  350 bits (899), Expect = 2e-94
 Identities = 167/218 (76%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE LWA GG++AGLVNRE+VPIPE   S+D +E+           KIN+ERHS RCD
Sbjct: 489  LDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCD 548

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
            VELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSG
Sbjct: 549  VELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSG 608

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            L WLKIHLANLY GGVEKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLA
Sbjct: 609  LHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLA 668

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            AC+ L++ALKS SP++VISHLPIHQDGSCNGLQHYAAL
Sbjct: 669  ACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAAL 706


>dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase [Arabidopsis
            thaliana]
          Length = 786

 Score =  350 bits (899), Expect = 2e-94
 Identities = 167/218 (76%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCD 477
            L+VVE LWA GG++AGLVNRE+VPIPE   S+D +E+           KIN+ERHS RCD
Sbjct: 489  LDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCD 548

Query: 476  VELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSG 297
            VELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSG
Sbjct: 549  VELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSG 608

Query: 296  LRWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLA 117
            L WLKIHLANLY GGVEKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLA
Sbjct: 609  LHWLKIHLANLYAGGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLA 668

Query: 116  ACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            AC+ L++ALKS SP++VISHLPIHQDGSCNGLQHYAAL
Sbjct: 669  ACVILTQALKSPSPYSVISHLPIHQDGSCNGLQHYAAL 706


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Cucumis
            sativus]
          Length = 975

 Score =  350 bits (898), Expect = 2e-94
 Identities = 167/217 (76%), Positives = 187/217 (86%)
 Frame = -3

Query: 653  LNVVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDV 474
            L+VVE+LWA GG+ AGLV+R++VPIPE    D  E+           KINQE HSQRCDV
Sbjct: 472  LSVVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDV 531

Query: 473  ELKLSVARNMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGL 294
            ELKLSVAR MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGL
Sbjct: 532  ELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGL 591

Query: 293  RWLKIHLANLYGGGVEKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAA 114
             WLKIHLANLY GGVEKLSYD R++FV++++  I DSA N +NG+RWWL AEDPFQCLAA
Sbjct: 592  HWLKIHLANLYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAA 651

Query: 113  CINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAAL 3
            C+NLSEALKSS+PHTVIS+LPIHQDGSCNGLQHYAAL
Sbjct: 652  CMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAAL 688