BLASTX nr result

ID: Mentha26_contig00021575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021575
         (429 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    62   8e-08
ref|XP_007144753.1| hypothetical protein PHAVU_007G181800g [Phas...    58   1e-06
ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Caps...    58   2e-06
ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arab...    58   2e-06
ref|NP_198094.1| E3 ubiquitin-protein ligase ATL31 [Arabidopsis ...    57   2e-06
ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis t...    56   4e-06
gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabid...    56   4e-06
gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein A...    56   4e-06
gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis tha...    56   6e-06
emb|CBI36742.3| unnamed protein product [Vitis vinifera]               55   1e-05
ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...    55   1e-05

>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 43/98 (43%), Positives = 51/98 (52%)
 Frame = -2

Query: 296 HASIPFFALVFLLLSTAGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYI 117
           H S  FF L  +++   GAQ+   P +     ARFSPSM          LFFMGFFSIYI
Sbjct: 14  HLSFLFFLLQMIVV---GAQTRPPPTDQYPYAARFSPSMAIIIVVLIAALFFMGFFSIYI 70

Query: 116 RHCYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           RHC D       +V R +SM        RGLD SVI+T
Sbjct: 71  RHCSD-SSGAGGSVRRAISMRARRTAAARGLDRSVIDT 107


>ref|XP_007144753.1| hypothetical protein PHAVU_007G181800g [Phaseolus vulgaris]
           gi|561017943|gb|ESW16747.1| hypothetical protein
           PHAVU_007G181800g [Phaseolus vulgaris]
          Length = 372

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = -2

Query: 302 HKHASIPFFALVFLLLSTAGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSI 123
           +K+  I FF L+ L++  A AQS    +N  + Y RFSPSM          +F MGFFSI
Sbjct: 11  NKNGGIYFFLLLLLIVPLAAAQSSDNNQNT-SYYNRFSPSMAIIIVILIAAVFLMGFFSI 69

Query: 122 YIRHCYD 102
           YIRHC D
Sbjct: 70  YIRHCAD 76


>ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Capsella rubella]
           gi|482566528|gb|EOA30717.1| hypothetical protein
           CARUB_v10013853mg [Capsella rubella]
          Length = 405

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/96 (40%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
 Frame = -2

Query: 278 FALVFLLLST----AGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRH 111
           F +VFLL+ +    A +QS   P N P  Y R SP+M          LFFMGFFSIY RH
Sbjct: 19  FPIVFLLVLSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRH 78

Query: 110 CYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           C           G   S         RGLDA+V+ET
Sbjct: 79  CSGVPDAGVSPAGAARS-RGTVNAAARGLDAAVVET 113


>ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arabidopsis lyrata subsp.
           lyrata] gi|297328242|gb|EFH58661.1| hypothetical protein
           ARALYDRAFT_477807 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 39/94 (41%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
 Frame = -2

Query: 272 LVFLLLST----AGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 105
           +VFLL+ +    A +QS   P N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPANQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 104 DXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
                     G G           RGLDASV+ET
Sbjct: 75  GVPDAGVSPAG-GARSRATVNAAARGLDASVVET 107


>ref|NP_198094.1| E3 ubiquitin-protein ligase ATL31 [Arabidopsis thaliana]
           gi|68565208|sp|Q8LGA5.2|ATL31_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL31; AltName: Full=Protein
           CARBON/NITROGEN INSENSITIVE 1; AltName: Full=Protein
           SUPER SURVIVAL 1; AltName: Full=RING-H2 finger protein
           ATL31; Flags: Precursor gi|110742271|dbj|BAE99061.1|
           RING-H2 zinc finger protein-like [Arabidopsis thaliana]
           gi|332006302|gb|AED93685.1| E3 ubiquitin-protein ligase
           ATL31 [Arabidopsis thaliana]
          Length = 368

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/104 (40%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = -2

Query: 305 PHKHASIPFFALVFLLLSTAGAQSGSTPENNPNMYA---RFSPSMXXXXXXXXXXLFFMG 135
           P KH S+P   L FLLLS +  Q G TP+   + YA     SP+M          LFFMG
Sbjct: 3   PIKHISLPVLVL-FLLLSVSAGQPG-TPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMG 60

Query: 134 FFSIYIRHCYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           FF++YIRHC           G G           RGLDA  IET
Sbjct: 61  FFTVYIRHCTGAVDGSVTPAG-GARRRVTNATVARGLDAETIET 103


>ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
           gi|68565231|sp|Q8RXX9.2|ATL6_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL6; AltName: Full=RING-H2
           finger protein ATL6; Flags: Precursor
           gi|70905101|gb|AAZ14076.1| At3g05200 [Arabidopsis
           thaliana] gi|332640683|gb|AEE74204.1| E3
           ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
          Length = 398

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/94 (40%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = -2

Query: 272 LVFLLLST----AGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 105
           +VFLL+ +    A +QS   P N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 104 DXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
                     G G           RGLD SV+ET
Sbjct: 75  GVPDAGVSPAG-GARSRATVNAAARGLDVSVVET 107


>gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 388

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/94 (40%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = -2

Query: 272 LVFLLLST----AGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 105
           +VFLL+ +    A +QS   P N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74

Query: 104 DXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
                     G G           RGLD SV+ET
Sbjct: 75  GVPDAGVSPAG-GARSRATVNAAARGLDVSVVET 107


>gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 392

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/94 (40%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = -2

Query: 272 LVFLLLST----AGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 105
           +VFLL+ +    A +QS   P N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 9   IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 68

Query: 104 DXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
                     G G           RGLD SV+ET
Sbjct: 69  GVPDAGVSPAG-GARSRATVNAAARGLDVSVVET 101


>gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana]
          Length = 368

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
 Frame = -2

Query: 305 PHKHASIPFFALVFLLLSTAGAQSGSTPENNPNMYA---RFSPSMXXXXXXXXXXLFFMG 135
           P KH S+P   L FLLLS +  Q G TP+   + YA     SP+M          LFFMG
Sbjct: 3   PIKHISLPVLVL-FLLLSVSAGQPG-TPDQRHDPYAYSGSLSPAMAVVVVVVIAALFFMG 60

Query: 134 FFSIYIRHCYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           FF++YIRHC           G G           RGLD   IET
Sbjct: 61  FFTVYIRHCTGAVDGSVTPAG-GARRRVTNATVARGLDVETIET 103


>emb|CBI36742.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/99 (38%), Positives = 51/99 (51%)
 Frame = -2

Query: 299 KHASIPFFALVFLLLSTAGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIY 120
           +H ++  + L+ LLL  AGAQS ++  N+P    RFS SM          LF MGFFS+Y
Sbjct: 56  QHGTVSLWILL-LLLPFAGAQSDTS--NDPYQQQRFSSSMAIIIVILVAALFLMGFFSVY 112

Query: 119 IRHCYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           IRHC D           G ++        RGLD +V+ET
Sbjct: 113 IRHCSDSRNGGSIRAAAGAAL-GRSRRGTRGLDQAVLET 150


>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 38/99 (38%), Positives = 51/99 (51%)
 Frame = -2

Query: 299 KHASIPFFALVFLLLSTAGAQSGSTPENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIY 120
           +H ++  + L+ LLL  AGAQS ++  N+P    RFS SM          LF MGFFS+Y
Sbjct: 28  QHGTVSLWILL-LLLPFAGAQSDTS--NDPYQQQRFSSSMAIIIVILVAALFLMGFFSVY 84

Query: 119 IRHCYDXXXXXXXTVGRGMSMXXXXXXXXRGLDASVIET 3
           IRHC D           G ++        RGLD +V+ET
Sbjct: 85  IRHCSDSRNGGSIRAAAGAAL-GRSRRGTRGLDQAVLET 122


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