BLASTX nr result

ID: Mentha26_contig00021573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021573
         (437 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007144753.1| hypothetical protein PHAVU_007G181800g [Phas...    60   3e-07
ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Caps...    57   2e-06
ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arab...    57   3e-06
ref|XP_002512343.1| ring finger protein, putative [Ricinus commu...    57   3e-06
ref|XP_004957082.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    56   5e-06
gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus...    56   6e-06
ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis t...    55   8e-06
gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabid...    55   8e-06
gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein A...    55   8e-06

>ref|XP_007144753.1| hypothetical protein PHAVU_007G181800g [Phaseolus vulgaris]
           gi|561017943|gb|ESW16747.1| hypothetical protein
           PHAVU_007G181800g [Phaseolus vulgaris]
          Length = 372

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/113 (35%), Positives = 52/113 (46%)
 Frame = -2

Query: 340 SHRMKTPNTHKHASIPFFAVVFLLLTTAGAQSGPTTENNPNMYARFSPSMXXXXXXXXXX 161
           S    T  ++K+  I FF ++ L++  A AQS    +N  + Y RFSPSM          
Sbjct: 2   SQMKNTNGSNKNGGIYFFLLLLLIVPLAAAQSSDNNQNT-SYYNRFSPSMAIIIVILIAA 60

Query: 160 LFFMGFFSIYIRHCYDXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
           +F MGFFSIYIRHC D                         GLD +VI+ FPT
Sbjct: 61  VFLMGFFSIYIRHCAD-------SPSASIRNLTGAAARPGRGLDQAVIDAFPT 106


>ref|XP_006297819.1| hypothetical protein CARUB_v10013853mg [Capsella rubella]
           gi|482566528|gb|EOA30717.1| hypothetical protein
           CARUB_v10013853mg [Capsella rubella]
          Length = 405

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/100 (39%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
 Frame = -2

Query: 289 FAVVFLLLTT----AGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRH 122
           F +VFLL+ +    A +QS P   N P  Y R SP+M          LFFMGFFSIY RH
Sbjct: 19  FPIVFLLVLSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRH 78

Query: 121 CYDXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
           C                           GLDA+V+ETFPT
Sbjct: 79  C--SGVPDAGVSPAGAARSRGTVNAAARGLDAAVVETFPT 116


>ref|XP_002882402.1| hypothetical protein ARALYDRAFT_477807 [Arabidopsis lyrata subsp.
           lyrata] gi|297328242|gb|EFH58661.1| hypothetical protein
           ARALYDRAFT_477807 [Arabidopsis lyrata subsp. lyrata]
          Length = 398

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/98 (39%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
 Frame = -2

Query: 283 VVFLLLTT----AGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 116
           +VFLL+ +    A +QS P   N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPANQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHC- 73

Query: 115 DXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
                                     GLDASV+ETFPT
Sbjct: 74  -SGVPDAGVSPAGGARSRATVNAAARGLDASVVETFPT 110


>ref|XP_002512343.1| ring finger protein, putative [Ricinus communis]
           gi|223548304|gb|EEF49795.1| ring finger protein,
           putative [Ricinus communis]
          Length = 380

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/99 (38%), Positives = 45/99 (45%)
 Frame = -2

Query: 298 IPFFAVVFLLLTTAGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHC 119
           I  F ++     TA AQ  P    +P  YAR +PSM          LFFMGFFS+YIRHC
Sbjct: 9   ISIFTILLASPFTALAQPSPAEARDPYGYARVTPSMAIIIVVLIAALFFMGFFSVYIRHC 68

Query: 118 YDXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
            +                         GLDA+VIETFPT
Sbjct: 69  AN--SSNGVSVQGLANGGRSRRAAAARGLDAAVIETFPT 105


>ref|XP_004957082.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Setaria italica]
          Length = 395

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/99 (35%), Positives = 43/99 (43%)
 Frame = -2

Query: 298 IPFFAVVFLLLTTAGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHC 119
           +P F ++  +     AQ GP   N    Y  FSPSM           FF+GFFSIY+RHC
Sbjct: 13  LPLFLLLLAVADFTAAQ-GPQQTNGQTPYTNFSPSMAIVIVVLIAAFFFLGFFSIYVRHC 71

Query: 118 YDXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
           Y                          GLDA+V+ETFPT
Sbjct: 72  Y--GDGSSGYSASPAPNGAAARSRRQRGLDAAVLETFPT 108


>gb|EYU20999.1| hypothetical protein MIMGU_mgv1a008144mg [Mimulus guttatus]
          Length = 383

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/102 (40%), Positives = 45/102 (44%)
 Frame = -2

Query: 307 HASIPFFAVVFLLLTTAGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYI 128
           H S  FF    L +   GAQ+ P   +     ARFSPSM          LFFMGFFSIYI
Sbjct: 14  HLSFLFF---LLQMIVVGAQTRPPPTDQYPYAARFSPSMAIIIVVLIAALFFMGFFSIYI 70

Query: 127 RHCYDXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
           RHC D                         GLD SVI+TFPT
Sbjct: 71  RHCSD--SSGAGGSVRRAISMRARRTAAARGLDRSVIDTFPT 110


>ref|NP_566249.1| E3 ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
           gi|68565231|sp|Q8RXX9.2|ATL6_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL6; AltName: Full=RING-H2
           finger protein ATL6; Flags: Precursor
           gi|70905101|gb|AAZ14076.1| At3g05200 [Arabidopsis
           thaliana] gi|332640683|gb|AEE74204.1| E3
           ubiquitin-protein ligase ATL6 [Arabidopsis thaliana]
          Length = 398

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/98 (38%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
 Frame = -2

Query: 283 VVFLLLTT----AGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 116
           +VFLL+ +    A +QS P   N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHC- 73

Query: 115 DXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
                                     GLD SV+ETFPT
Sbjct: 74  -SGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPT 110


>gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 388

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/98 (38%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
 Frame = -2

Query: 283 VVFLLLTT----AGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 116
           +VFLL+ +    A +QS P   N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 15  IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHC- 73

Query: 115 DXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
                                     GLD SV+ETFPT
Sbjct: 74  -SGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPT 110


>gb|AAF27026.1|AC009177_16 putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
          Length = 392

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 38/98 (38%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
 Frame = -2

Query: 283 VVFLLLTT----AGAQSGPTTENNPNMYARFSPSMXXXXXXXXXXLFFMGFFSIYIRHCY 116
           +VFLL+ +    A +QS P   N P  Y R SP+M          LFFMGFFSIY RHC 
Sbjct: 9   IVFLLILSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHC- 67

Query: 115 DXXXXXXXXXXXXXXXXXXXXXXXXXGLDASVIETFPT 2
                                     GLD SV+ETFPT
Sbjct: 68  -SGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPT 104


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