BLASTX nr result

ID: Mentha26_contig00021502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021502
         (697 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...   103   5e-20
emb|CBI40014.3| unnamed protein product [Vitis vinifera]               71   4e-10
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...    71   4e-10
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...    67   6e-09
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...    67   6e-09

>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score =  103 bits (257), Expect = 5e-20
 Identities = 71/199 (35%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
 Frame = +3

Query: 75  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXRDTINFRTQCILXXXXXXXXXXXXX--L 248
           MSCLLPQFKCSPDTFAVNF             R++INFRTQC+L               L
Sbjct: 1   MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60

Query: 249 ELEKXXXXXXXXXXXXXXXXXXXXXEKAPS----LDS-HQIPFVAERPLTYVGAVGPPSE 413
           E EK                      +A +    LD    +P  + + LTYVG+VGPPSE
Sbjct: 61  EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSLPVASNKTLTYVGSVGPPSE 120

Query: 414 IRLGPNMDETNLLTSEDTVITXXXXXXXXXXXXXXXXXXXXXMMISLHXXXXXXXXXXGV 593
           I LG N+D+  L+TS++ VIT                     MM+SLH            
Sbjct: 121 INLGANLDKEALITSDEAVITAAASEALALAKAAVKVAKDAAMMVSLHRSTKPDTKS--- 177

Query: 594 LPEVDTHPVETIFREAKVG 650
             EVDT     + REA++G
Sbjct: 178 FLEVDTSAERVVVREAEIG 196


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 47/134 (35%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +3

Query: 75  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXRDTINFRTQCILXXXXXXXXXXXXX-LE 251
           MSCLLPQFKC PDTF+ +              R+ I FR QC L              L+
Sbjct: 1   MSCLLPQFKCPPDTFSTH-----PKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLD 55

Query: 252 LEKXXXXXXXXXXXXXXXXXXXXXEKAPSLDSHQIPFVAERPLTYVGAVGPPSEIRLGPN 431
           +EK                      + PSL+SH     A RP TY+G VGPP+E      
Sbjct: 56  IEKL---------------------RLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEAT 94

Query: 432 MDETNLLTSEDTVI 473
           +    LLTSE+ VI
Sbjct: 95  LARETLLTSEEAVI 108


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 47/134 (35%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +3

Query: 75  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXRDTINFRTQCILXXXXXXXXXXXXX-LE 251
           MSCLLPQFKC PDTF+ +              R+ I FR QC L              L+
Sbjct: 1   MSCLLPQFKCPPDTFSTH--PKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLD 58

Query: 252 LEKXXXXXXXXXXXXXXXXXXXXXEKAPSLDSHQIPFVAERPLTYVGAVGPPSEIRLGPN 431
           +EK                      + PSL+SH     A RP TY+G VGPP+E      
Sbjct: 59  IEKL---------------------RLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEAT 97

Query: 432 MDETNLLTSEDTVI 473
           +    LLTSE+ VI
Sbjct: 98  LARETLLTSEEAVI 111


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
           sinensis]
          Length = 605

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
 Frame = +3

Query: 63  YRRRMSCLLPQFKCSPDTFAVNF---XXXXXXXXXXXXXRDTINFRTQCIL-XXXXXXXX 230
           + + MSCLLPQFKC PDTF+++F                ++ I FRT C+L         
Sbjct: 20  FNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTST 79

Query: 231 XXXXXLELEKXXXXXXXXXXXXXXXXXXXXXEKAPSLDSHQIPFVAERPLTYVGAVGPPS 410
                L++EK                      + PSL++H     A R  TY GAVGP +
Sbjct: 80  AMTTVLDVEKL---------------------RLPSLEAHSNAVAANRQWTYFGAVGPST 118

Query: 411 EIRLGPNMDETNLLTSEDTVI 473
           E  LG ++  T  LTS++ VI
Sbjct: 119 EENLGTSL-ATETLTSDEAVI 138


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
           gi|557539534|gb|ESR50578.1| hypothetical protein
           CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
 Frame = +3

Query: 63  YRRRMSCLLPQFKCSPDTFAVNF---XXXXXXXXXXXXXRDTINFRTQCIL-XXXXXXXX 230
           + + MSCLLPQFKC PDTF+++F                ++ I FRT C+L         
Sbjct: 20  FNKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTST 79

Query: 231 XXXXXLELEKXXXXXXXXXXXXXXXXXXXXXEKAPSLDSHQIPFVAERPLTYVGAVGPPS 410
                L++EK                      + PSL++H     A R  TY GAVGP +
Sbjct: 80  AMTTVLDVEKL---------------------RLPSLEAHSNAVAANRQWTYFGAVGPST 118

Query: 411 EIRLGPNMDETNLLTSEDTVI 473
           E  LG ++  T  LTS++ VI
Sbjct: 119 EENLGTSL-ATETLTSDEAVI 138


Top