BLASTX nr result

ID: Mentha26_contig00021501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021501
         (788 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...    97   5e-18
emb|CBI40014.3| unnamed protein product [Vitis vinifera]               75   3e-11
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...    75   3e-11
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...    65   4e-08
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...    65   4e-08

>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 62/141 (43%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
 Frame = +2

Query: 74  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXREAINFRTQCI--XXXXXXXXXXXXXXX 247
           MSCLLPQFKCSPDTFAVNF             RE+INFRTQC+                 
Sbjct: 1   MSCLLPQFKCSPDTFAVNFKSQTLFTVHSSKSRESINFRTQCVLSTTSPPPTMAATTTLL 60

Query: 248 ELEKLQ---LXXXXXXXXXXXXXTLELEKVPSLDTHR---IPFVAERPLAYVGAVGPPSE 409
           E EKLQ   L             T    K   LD  +   +P  + + L YVG+VGPPSE
Sbjct: 61  EFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSLPVASNKTLTYVGSVGPPSE 120

Query: 410 INLRPNLDETDLLTSEENVIT 472
           INL  NLD+  L+TS+E VIT
Sbjct: 121 INLGANLDKEALITSDEAVIT 141


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
 Frame = +2

Query: 74  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXREAINFRTQC-IXXXXXXXXXXXXXXXE 250
           MSCLLPQFKC PDTF+ +              REAI FR QC +               +
Sbjct: 1   MSCLLPQFKCPPDTFSTH-----PKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLD 55

Query: 251 LEKLQLXXXXXXXXXXXXXTLELEKVPSLDTHRIPFVAERPLAYVGAVGPPSEINLRPNL 430
           +EKL+L                    PSL++H     A RP  Y+G VGPP+E N    L
Sbjct: 56  IEKLRL--------------------PSLESHSNSVAAHRPWTYIGVVGPPTEANFEATL 95

Query: 431 DETDLLTSEENVI 469
               LLTSEE VI
Sbjct: 96  ARETLLTSEEAVI 108


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
 Frame = +2

Query: 74  MSCLLPQFKCSPDTFAVNFXXXXXXXXXXXXXREAINFRTQC-IXXXXXXXXXXXXXXXE 250
           MSCLLPQFKC PDTF+ +              REAI FR QC +               +
Sbjct: 1   MSCLLPQFKCPPDTFSTH--PKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLD 58

Query: 251 LEKLQLXXXXXXXXXXXXXTLELEKVPSLDTHRIPFVAERPLAYVGAVGPPSEINLRPNL 430
           +EKL+L                    PSL++H     A RP  Y+G VGPP+E N    L
Sbjct: 59  IEKLRL--------------------PSLESHSNSVAAHRPWTYIGVVGPPTEANFEATL 98

Query: 431 DETDLLTSEENVI 469
               LLTSEE VI
Sbjct: 99  ARETLLTSEEAVI 111


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
           sinensis]
          Length = 605

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 48/137 (35%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
 Frame = +2

Query: 74  MSCLLPQFKCSPDTFAVNF---XXXXXXXXXXXXXREAINFRTQCIXXXXXXXXXXXXXX 244
           MSCLLPQFKC PDTF+++F                +E I FRT C+              
Sbjct: 24  MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCV-------------- 69

Query: 245 XELEKLQLXXXXXXXXXXXXXTLELEK--VPSLDTHRIPFVAERPLAYVGAVGPPSEINL 418
                  L              L++EK  +PSL+ H     A R   Y GAVGP +E NL
Sbjct: 70  -------LSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENL 122

Query: 419 RPNLDETDLLTSEENVI 469
             +L  T+ LTS+E VI
Sbjct: 123 GTSL-ATETLTSDEAVI 138


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
           gi|557539534|gb|ESR50578.1| hypothetical protein
           CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 48/137 (35%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
 Frame = +2

Query: 74  MSCLLPQFKCSPDTFAVNF---XXXXXXXXXXXXXREAINFRTQCIXXXXXXXXXXXXXX 244
           MSCLLPQFKC PDTF+++F                +E I FRT C+              
Sbjct: 24  MSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCV-------------- 69

Query: 245 XELEKLQLXXXXXXXXXXXXXTLELEK--VPSLDTHRIPFVAERPLAYVGAVGPPSEINL 418
                  L              L++EK  +PSL+ H     A R   Y GAVGP +E NL
Sbjct: 70  -------LSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENL 122

Query: 419 RPNLDETDLLTSEENVI 469
             +L  T+ LTS+E VI
Sbjct: 123 GTSL-ATETLTSDEAVI 138


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