BLASTX nr result

ID: Mentha26_contig00021459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00021459
         (303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccin...    57   2e-06
gb|AAW30346.1| ribosomal protein L2 [Platanus occidentalis]            57   3e-06
gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palm...    57   3e-06
gb|AGK25082.1| ribosomal protein L2, partial (mitochondrion) [Ma...    56   6e-06
ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriod...    56   6e-06
gb|AAW30343.1| ribosomal protein L2 [Liriodendron tulipifera]          56   6e-06
ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259...    56   6e-06
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209...    56   6e-06
emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera]    56   6e-06

>ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccinium macrocarpon]
           gi|549531664|gb|AGX28803.1| ribosomal protein L2
           (mitochondrion) [Vaccinium macrocarpon]
          Length = 335

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGV-----PXXXXXXXXXXXXHTKTSVKDVIV 203
           LPG VD R  A+ S       + + Y++VG+     P              KT  KDV  
Sbjct: 116 LPGKVDQRKVASFSPG-----LMAAYVVVGLTTGMPPWSKGPFTSKGAGSKKTCAKDVFF 170

Query: 204 SAFST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           SA S+ KAKGE A    G+S GFPRIAVAG++PAFF
Sbjct: 171 SALSSPKAKGETAPLSVGSSFGFPRIAVAGAKPAFF 206


>gb|AAW30346.1| ribosomal protein L2 [Platanus occidentalis]
          Length = 217

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXX--HTKTSVKDVIVSAF 212
           LPG VD R  A  S       + + Y++VG+P                KT  KDV  SA 
Sbjct: 88  LPGKVDQRKVACFSPG-----LMAAYVVVGLPTRMPPWSKSQASAGSKKTCAKDVFFSAL 142

Query: 213 ST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           S+ KAKGE A    G+S GFPRIAVAG++PAFF
Sbjct: 143 SSPKAKGETASLSFGSSFGFPRIAVAGAKPAFF 175


>gb|AAL48207.1|AF387186_1 ribosomal protein L2 [Lonicera sp. Palmer 679]
          Length = 228

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXXHT-----KTSVKDVIV 203
           LPG VD R  A  S       + + Y++VG+P                   KT  KDV  
Sbjct: 58  LPGKVDQRKVACFSPE-----LMAAYVVVGLPTRMPPWSKSPFTSKGAGSKKTCAKDVFF 112

Query: 204 SAFST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           SA S+ KAKGE A    G+S GFPRIAVAG++PAFF
Sbjct: 113 SALSSPKAKGETASLSFGSSFGFPRIAVAGAKPAFF 148


>gb|AGK25082.1| ribosomal protein L2, partial (mitochondrion) [Magnolia stellata]
          Length = 225

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXX--HTKTSVKDVIVSAF 212
           LPG VD R  A  S       + + Y++VG+P                KT  KDV  SA 
Sbjct: 90  LPGKVDQRKVACFSPG-----LMAAYVVVGLPTRMPPWSKSQASAGSKKTCAKDVFFSAL 144

Query: 213 ST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           S+ KAKG+ A    G+S GFPRIAVAG++PAFF
Sbjct: 145 SSQKAKGDTASLSLGSSFGFPRIAVAGAKPAFF 177


>ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriodendron tulipifera]
           gi|480541934|gb|AGJ90427.1| ribosomal protein L2
           (mitochondrion) [Liriodendron tulipifera]
          Length = 554

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXX--HTKTSVKDVIVSAF 212
           LPG VD R  A  S       + + Y++VG+P                KT  KDV  SA 
Sbjct: 115 LPGKVDQRKVACFSPG-----LMAAYVVVGLPTRMPPWSKSQASAGSKKTCAKDVFFSAL 169

Query: 213 ST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           S+ KAKG+ A    G+S GFPRIAVAG++PAFF
Sbjct: 170 SSQKAKGDTASLSLGSSFGFPRIAVAGAKPAFF 202


>gb|AAW30343.1| ribosomal protein L2 [Liriodendron tulipifera]
          Length = 228

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXX--HTKTSVKDVIVSAF 212
           LPG VD R  A  S       + + Y++VG+P                KT  KDV  SA 
Sbjct: 92  LPGKVDQRKVACFSPG-----LMAAYVVVGLPTRMPPWSKSQASAGSKKTCAKDVFFSAL 146

Query: 213 ST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           S+ KAKG+ A    G+S GFPRIAVAG++PAFF
Sbjct: 147 SSQKAKGDTASLSLGSSFGFPRIAVAGAKPAFF 179


>ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259156826|gb|ACV96687.1|
           ribosomal protein L2 [Cucurbita pepo]
          Length = 332

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/95 (44%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
 Frame = +3

Query: 42  PGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXXHT-----KTSVKDVIVS 206
           PG VD R  A  S  G+     + Y++VG+P                   KT  KDV  S
Sbjct: 114 PGKVDQRKVACFSP-GQM----AAYVVVGLPTRIPPCSKSPFTSKGAGSKKTCAKDVFFS 168

Query: 207 AFST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           AFS+ K KGE A    G+SLGFPRIAVAG++PAFF
Sbjct: 169 AFSSQKTKGETASLSFGSSLGFPRIAVAGAKPAFF 203


>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
           ribosomal protein L2 [Vitis vinifera]
           gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
           vinifera]
          Length = 334

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXXHT-----KTSVKDVIV 203
           LPG VD R  A  S         + Y++VG+P                   KT  KDV  
Sbjct: 116 LPGKVDQRKVACFSPGP-----MAAYVVVGLPTRMPPWSKSPFTSKGAGSKKTCAKDVFF 170

Query: 204 SAFST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           SAFS+ KAKGE +    G+S GFPRIAVAG++PAFF
Sbjct: 171 SAFSSPKAKGETSSLSFGSSFGFPRIAVAGAKPAFF 206


>emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera]
          Length = 336

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
 Frame = +3

Query: 39  LPGLVDYRSAANLSDRGEKQTVKSKYLMVGVPXXXXXXXXXXXXHT-----KTSVKDVIV 203
           LPG VD R  A  S         + Y++VG+P                   KT  KDV  
Sbjct: 116 LPGKVDQRKVACFSPGP-----MAAYVVVGLPTRMPPWSKSPFTSKGAGSKKTCAKDVFF 170

Query: 204 SAFST-KAKGENA----GNSLGFPRIAVAGSRPAFF 296
           SAFS+ KAKGE +    G+S GFPRIAVAG++PAFF
Sbjct: 171 SAFSSPKAKGETSSLSFGSSFGFPRIAVAGAKPAFF 206


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