BLASTX nr result
ID: Mentha26_contig00021347
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00021347
(372 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911... 62 1e-07
sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitoc... 62 1e-07
gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana] 62 1e-07
ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclep... 61 2e-07
ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ... 61 2e-07
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet... 61 2e-07
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 61 2e-07
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ... 61 2e-07
ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. m... 60 3e-07
ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgari... 60 3e-07
gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea] 58 2e-06
ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr... 55 8e-06
>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
ribosomal protein S4 [Brassica napus]
Length = 362
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWSEYER 244
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS R
Sbjct: 316 THYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial
Length = 362
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWSEYER 244
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS R
Sbjct: 316 THYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>gb|ACH78250.1| ribosomal protein S4 [Arabidopsis thaliana]
Length = 362
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWSEYER 244
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS R
Sbjct: 316 THYLEVNYRTPKAVVFYGPNIGHIPHDIRLKDLNLLLWSRNGR 358
>ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca]
gi|556562347|gb|AGZ63043.1| ribosomal protein S4
(mitochondrion) [Asclepias syriaca]
Length = 274
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 228 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 266
>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
gi|357197350|gb|AET62946.1| ribosomal protein S4
(mitochondrion) [Lotus japonicus]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 312 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 350
>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
gi|372450274|ref|YP_005090457.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197313|gb|AET62910.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197320|gb|AET62917.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 312 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 350
>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 303 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 341
>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
sativa Japonica Group]
Length = 352
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THYLEVN++ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 306 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLLLWS 344
>ref|YP_004222288.1| ribosomal protein S4 [Beta vulgaris subsp. maritima]
gi|317905723|emb|CBJ14108.1| ribosomal protein S4 [Beta
vulgaris subsp. maritima] gi|319439803|emb|CBJ17515.1|
ribosomal protein S4 [Beta vulgaris subsp. maritima]
Length = 315
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THY EVNH+ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 269 THYSEVNHRTLKAVVFYGPNIDHIPHDIRLKDLNLLLWS 307
>ref|NP_064046.2| rps4 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|346683270|ref|YP_004842202.1| ribosomal protein S4
[Beta macrocarpa] gi|87248052|gb|ABD36080.1| ribosomal
protein S4 [Beta vulgaris subsp. vulgaris]
gi|148491424|dbj|BAA99356.2| ribosomal protein S4 [Beta
vulgaris subsp. vulgaris] gi|320148708|emb|CBJ23346.1|
ribosomal protein S4 [Beta vulgaris subsp. maritima]
gi|345500188|emb|CBX25007.1| ribosomal protein S4 [Beta
macrocarpa] gi|384939188|emb|CBL52035.1| ribosoma
lprotein S4 (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 315
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWS 256
THY EVNH+ KA++FYGP+I HIP + +KDLNLL WS
Sbjct: 269 THYSEVNHRTLKAVVFYGPNIDHIPHDIRLKDLNLLLWS 307
>gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea]
Length = 354
Score = 57.8 bits (138), Expect = 2e-06
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWSEYER 244
THYLEVNH+ QKA++ YGP+I HIP + +KD NLL S ER
Sbjct: 308 THYLEVNHRTQKAVVSYGPNIGHIPHDIRLKDPNLLLRSRNER 350
>ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica]
gi|340549497|gb|AEK53318.1| ribosomal protein S4
(mitochondrion) [Boea hygrometrica]
Length = 329
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = -1
Query: 372 THYLEVNHKIQKAIMFYGPHIAHIPLHVSMKDLNLLCWSEYER 244
THY EVNH+ KA++FYGP+I HIP + +KD NLL S ER
Sbjct: 283 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNLLLRSGNER 325