BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00019568
         (759 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus...   324   2e-86
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   304   3e-80
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   291   2e-76
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              291   2e-76
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   290   3e-76
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   290   3e-76
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   290   3e-76
ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF,...   289   8e-76
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   288   2e-75
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   285   9e-75
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   285   1e-74
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   283   4e-74
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   282   1e-73
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   280   5e-73
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   278   1e-72
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   278   1e-72
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   278   1e-72
ref|XP_006293948.1| hypothetical protein CARUB_v10022939mg [Caps...   273   6e-71
ref|XP_006293947.1| hypothetical protein CARUB_v10022939mg [Caps...   273   6e-71
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   271   2e-70

>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
          Length = 559

 Score =  324 bits (830), Expect = 2e-86
 Identities = 166/243 (68%), Positives = 190/243 (78%), Gaps = 2/243 (0%)
 Frame = +3

Query: 36  DDSSSTRGLASDPV--IVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFD 209
           D+SSSTR L   PV  IVRS R LERQAKRR  PKP++E  E NH RK   H+K    +D
Sbjct: 184 DNSSSTRSLVGSPVQRIVRSKRRLERQAKRR-APKPQLEDQEMNHRRKLEPHKKSSEGYD 242

Query: 210 PNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAV 389
           PNDPLRLFL GP              I KIQ+LMKLQ V++RL  QFS EPT++EWAAAV
Sbjct: 243 PNDPLRLFLWGPETTQLLSAKEEADLIAKIQELMKLQEVRSRLQTQFSREPTLVEWAAAV 302

Query: 390 GISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEK 569
           GIS Q+L+ Q++ GN SR+KLIYANFR+VV+IAKQYQGRGLNLQDLLQ GS+GLMKSVEK
Sbjct: 303 GISTQALQFQVNCGNFSREKLIYANFRLVVYIAKQYQGRGLNLQDLLQLGSMGLMKSVEK 362

Query: 570 FKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNP 749
           FKP  GCRFATYAYWWIRQ IRK++FQHSRTIRLPEN+Y LLSKVYEAKKTC +QGN  P
Sbjct: 363 FKPLVGCRFATYAYWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQP 422

Query: 750 SRE 758
           ++E
Sbjct: 423 TKE 425


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
           gi|462400636|gb|EMJ06193.1| hypothetical protein
           PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  304 bits (778), Expect = 3e-80
 Identities = 157/258 (60%), Positives = 186/258 (72%), Gaps = 6/258 (2%)
 Frame = +3

Query: 3   AKDAGISGINVDD---SSSTRGLASDPVIVRSTRLLERQAKR---RRVPKPKVEFLETNH 164
           A+D+   G + DD   +S    +  +   VRSTR+LER+ KR   R+VPK KV   E+N 
Sbjct: 177 AEDSQSMGADFDDLGYTSLANWIVEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNS 236

Query: 165 HRKPGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHA 344
                  +K+   F+PNDPLRLFL GP              I ++QDL KL+ VK+RL  
Sbjct: 237 FTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQT 296

Query: 345 QFSCEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQD 524
           QF  EPT++EWA AVGISCQ LKSQ+  G  SR+KLIYAN RMVVHIAKQYQGRGL LQD
Sbjct: 297 QFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQD 356

Query: 525 LLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKV 704
           L+QEGS+GLMKSVEKFKPQAGCRFATYAYWWIRQ +RKAIFQHSRTIRLPEN+Y LL KV
Sbjct: 357 LMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKV 416

Query: 705 YEAKKTCFQQGNRNPSRE 758
            EAKK+C Q+GN NP++E
Sbjct: 417 LEAKKSCIQEGNHNPNKE 434


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  291 bits (745), Expect = 2e-76
 Identities = 152/258 (58%), Positives = 189/258 (73%), Gaps = 7/258 (2%)
 Frame = +3

Query: 6   KDAGISGINVDDSSS-TRGLASDPVI------VRSTRLLERQAKRRRVPKPKVEFLETNH 164
           ++A + G +++DS S + G  S P +      VRSTRLLER++K+RR   PKV   E + 
Sbjct: 183 ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRR--NPKVAVHENHG 240

Query: 165 HRKPGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHA 344
            R+    RK++  +DP DPLRLFL GP              I++IQ+LM+L+ VK RL +
Sbjct: 241 SRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQS 300

Query: 345 QFSCEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQD 524
               EPT++EWA AVG+SCQ L+SQ+H GN SRQKLIYAN RMVVHIAKQYQGRGLNLQD
Sbjct: 301 HLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQD 360

Query: 525 LLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKV 704
           LLQEGS+GLM SVEKFKP AGCRFA+YAYWWIRQ +RKAIFQHSRTIRLPEN+Y LL KV
Sbjct: 361 LLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKV 420

Query: 705 YEAKKTCFQQGNRNPSRE 758
            EAK+   Q+G+ +P++E
Sbjct: 421 KEAKRLFIQEGHHDPTKE 438


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  291 bits (745), Expect = 2e-76
 Identities = 152/258 (58%), Positives = 189/258 (73%), Gaps = 7/258 (2%)
 Frame = +3

Query: 6   KDAGISGINVDDSSS-TRGLASDPVI------VRSTRLLERQAKRRRVPKPKVEFLETNH 164
           ++A + G +++DS S + G  S P +      VRSTRLLER++K+RR   PKV   E + 
Sbjct: 172 ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRR--NPKVAVHENHG 229

Query: 165 HRKPGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHA 344
            R+    RK++  +DP DPLRLFL GP              I++IQ+LM+L+ VK RL +
Sbjct: 230 SRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKRLQS 289

Query: 345 QFSCEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQD 524
               EPT++EWA AVG+SCQ L+SQ+H GN SRQKLIYAN RMVVHIAKQYQGRGLNLQD
Sbjct: 290 HLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLNLQD 349

Query: 525 LLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKV 704
           LLQEGS+GLM SVEKFKP AGCRFA+YAYWWIRQ +RKAIFQHSRTIRLPEN+Y LL KV
Sbjct: 350 LLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKV 409

Query: 705 YEAKKTCFQQGNRNPSRE 758
            EAK+   Q+G+ +P++E
Sbjct: 410 KEAKRLFIQEGHHDPTKE 427


>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Citrus sinensis]
          Length = 561

 Score =  290 bits (743), Expect = 3e-76
 Identities = 147/255 (57%), Positives = 185/255 (72%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRST+ LER++K+R+V KPKV   ET + RK
Sbjct: 173 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRK 232

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FD NDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 233 ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 292

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++EWA A+G+SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 293 REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 352

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 353 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 412

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 413 KRLYIQEGNHSPDKE 427


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Citrus sinensis]
          Length = 569

 Score =  290 bits (743), Expect = 3e-76
 Identities = 147/255 (57%), Positives = 185/255 (72%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRST+ LER++K+R+V KPKV   ET + RK
Sbjct: 181 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRK 240

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FD NDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 241 ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++EWA A+G+SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 301 REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 360

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 361 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 420

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 421 KRLYIQEGNHSPDKE 435


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Citrus sinensis]
          Length = 570

 Score =  290 bits (743), Expect = 3e-76
 Identities = 147/255 (57%), Positives = 185/255 (72%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRST+ LER++K+R+V KPKV   ET + RK
Sbjct: 182 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRK 241

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FD NDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 242 ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 301

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++EWA A+G+SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 302 REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 361

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 362 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 421

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 422 KRLYIQEGNHSPDKE 436


>ref|XP_004304450.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 554

 Score =  289 bits (739), Expect = 8e-76
 Identities = 149/243 (61%), Positives = 176/243 (72%), Gaps = 3/243 (1%)
 Frame = +3

Query: 39  DSSSTRGLASDPVIVRSTRLLERQAKR---RRVPKPKVEFLETNHHRKPGSHRKLDSRFD 209
           + S++ GL  +   VRST+LLER+ KR   R +   KV   E +        RK     +
Sbjct: 178 NESTSLGLGWEEETVRSTQLLERRRKRLKKRNLLNSKVPNYENSSSNSSDLRRKYREGLN 237

Query: 210 PNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAV 389
           PNDPLRLFL GP              I ++QD+ KL+ VK+RL +QF  EPT++EWA AV
Sbjct: 238 PNDPLRLFLWGPETRQLLTLKEETELIARVQDVFKLEAVKSRLQSQFGREPTLIEWAEAV 297

Query: 390 GISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEK 569
           GISCQ L+SQ+  G  SR+KLIY+N RMVVHIAKQYQGRGL LQDLLQEGS+GLMKSVEK
Sbjct: 298 GISCQMLQSQLRCGTSSREKLIYSNLRMVVHIAKQYQGRGLGLQDLLQEGSMGLMKSVEK 357

Query: 570 FKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNP 749
           FKPQAGCRFATYAYWW+RQ IRKAIFQHSRTIRLPEN+Y LL KV EAKK+  Q+GN+NP
Sbjct: 358 FKPQAGCRFATYAYWWVRQTIRKAIFQHSRTIRLPENVYTLLGKVLEAKKSYIQEGNQNP 417

Query: 750 SRE 758
           SRE
Sbjct: 418 SRE 420


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum tuberosum]
          Length = 562

 Score =  288 bits (736), Expect = 2e-75
 Identities = 146/226 (64%), Positives = 168/226 (74%)
 Frame = +3

Query: 81  VRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFDPNDPLRLFLRGPXXXXX 260
           VRSTR  ERQ+++R  PKP  +  ETN   +P   RK++   D NDPLR+FL GP     
Sbjct: 203 VRSTRFTERQSRKRGAPKPTQQVQETNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQL 262

Query: 261 XXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAVGISCQSLKSQIHIGNIS 440
                    I+KIQ  MKLQ VK +L  QF+ EPT +EWA A GI+ + LKSQ+  G  S
Sbjct: 263 LTAKEESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSS 322

Query: 441 RQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWI 620
           R+KLI AN RMVVHIAKQYQGRGLNLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWI
Sbjct: 323 REKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWI 382

Query: 621 RQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNPSRE 758
           RQ +RKAIFQHSRTIRLPEN+Y LLSKV +AKK C QQGNR P++E
Sbjct: 383 RQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKE 428


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum lycopersicum]
          Length = 563

 Score =  285 bits (730), Expect = 9e-75
 Identities = 146/227 (64%), Positives = 171/227 (75%), Gaps = 1/227 (0%)
 Frame = +3

Query: 81  VRSTRLLERQAKRRRVPKPKVEFLETNHHR-KPGSHRKLDSRFDPNDPLRLFLRGPXXXX 257
           VRSTR +ERQ+++R  PKP  E  ETN+   +P   RK++   D NDPLR+FL GP    
Sbjct: 203 VRSTRFIERQSRKRGAPKPIQEVQETNNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQ 262

Query: 258 XXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAVGISCQSLKSQIHIGNI 437
                     I+KIQ  MKLQ VK +L  QF+ EPT LEWA A GI+ + LKSQ+  G  
Sbjct: 263 LLTAKEESELIVKIQISMKLQEVKHQLQIQFAREPTSLEWAEAAGITSRELKSQLLSGKS 322

Query: 438 SRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWW 617
           SR+KLI AN RMVVHIAKQYQGRGLNLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWW
Sbjct: 323 SREKLINANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWW 382

Query: 618 IRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNPSRE 758
           IRQ +RKAIFQHSRTIRLPEN+Y LLSKV +AK+ C +QGNR+P++E
Sbjct: 383 IRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKE 429


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
           gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
           rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  285 bits (729), Expect = 1e-74
 Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 10/254 (3%)
 Frame = +3

Query: 27  INVDDS-SSTRGLAS---------DPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKP 176
           +++DDS S++ G A+         + V VRSTR LERQ+KRRRV +PKV   ET   R+ 
Sbjct: 182 LDLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKRRRV-QPKVTIRETYSSRRT 240

Query: 177 GSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSC 356
              RKL   FDPNDPLRLFL GP                ++Q+LM+L+ VK++L +QF  
Sbjct: 241 DVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRLEKVKSKLQSQFGR 300

Query: 357 EPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQE 536
           EPT++EWA A+G+ C +L++++H GN SR KLIYAN RMVVHIAKQYQ RGL+LQDLLQE
Sbjct: 301 EPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQYQSRGLSLQDLLQE 360

Query: 537 GSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAK 716
           GS+GLMKSVE+FKPQ GCRFATYAYWWIRQ IRK+I QHSRT+RLPEN++ LLSKV +AK
Sbjct: 361 GSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRLPENVHTLLSKVLDAK 420

Query: 717 KTCFQQGNRNPSRE 758
           K+  ++GN  PS+E
Sbjct: 421 KSYIREGNHCPSKE 434


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
           gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
           FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  283 bits (725), Expect = 4e-74
 Identities = 146/243 (60%), Positives = 171/243 (70%)
 Frame = +3

Query: 30  NVDDSSSTRGLASDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFD 209
           N+  +SS+     +  IVRS R L RQ+  RR PK K    ET   +     ++L   FD
Sbjct: 159 NLASTSSSSFSLEEVKIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADVQKRLSQGFD 218

Query: 210 PNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAV 389
           PNDPLRLFL GP              I +IQDLM L+ VK RL +QF  EPT++EWA AV
Sbjct: 219 PNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAV 278

Query: 390 GISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEK 569
           G+SC  LK Q+H GN SR+KLI AN RMVVHIAK+YQ RGL LQDLLQEG++GLMKS+EK
Sbjct: 279 GLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEK 338

Query: 570 FKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNP 749
           FKPQAGCRFATYAYWWIRQ I KAIFQHSRTIRLPEN+YGLL KV EAK++  Q+GN  P
Sbjct: 339 FKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQP 398

Query: 750 SRE 758
           + E
Sbjct: 399 TAE 401


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
           PREDICTED: RNA polymerase sigma factor sigF,
           chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  282 bits (721), Expect = 1e-73
 Identities = 146/245 (59%), Positives = 174/245 (71%)
 Frame = +3

Query: 24  GINVDDSSSTRGLASDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSR 203
           G ++D SS    L+ +   VRSTRL +R++K+R+VPK      E ++ R   S RK   +
Sbjct: 184 GTSLDYSSLDDSLSKEGRTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEK 243

Query: 204 FDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAA 383
           FDPNDPLRLFL GP              I++IQDLM L  VK RL +QF  EPT++EWA 
Sbjct: 244 FDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAE 303

Query: 384 AVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSV 563
           A+GI+CQ L+SQ+H+   SR+KLI AN RMVVHIAKQYQGRGL+L DLLQ GSLGLMKSV
Sbjct: 304 ALGITCQHLQSQLHVFQTSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSV 363

Query: 564 EKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNR 743
           EKFKPQAGCRF +YAYWWIR  I KAIFQHSRTIRLPEN+Y LL KV EAK    + GN 
Sbjct: 364 EKFKPQAGCRFGSYAYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNY 423

Query: 744 NPSRE 758
            PS+E
Sbjct: 424 KPSKE 428


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score =  280 bits (715), Expect = 5e-73
 Identities = 147/252 (58%), Positives = 177/252 (70%), Gaps = 9/252 (3%)
 Frame = +3

Query: 30  NVDDSSSTRGLASDPV---------IVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGS 182
           N+DD+ ST GL    +          VRSTR LERQ+K RRV K K  F E    R+ G 
Sbjct: 164 NLDDTVST-GLEPTDLSNFSLEEVKTVRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGV 222

Query: 183 HRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEP 362
            +K++  FDP DPLRLFL GP              I ++QDLM L+ VK +   QF  +P
Sbjct: 223 QKKINEGFDPKDPLRLFLWGPETKQLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDP 282

Query: 363 TILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGS 542
           T++EWA AVG+S   ++SQ+H GN SR+KLI AN RMVVHIAKQYQGRGL+LQDLLQEGS
Sbjct: 283 TLVEWADAVGLSYSVMQSQLHSGNRSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGS 342

Query: 543 LGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKT 722
           +GLMKS+EKFKPQ GCRFATYAYWWIRQ +RKAIFQHSRTIRLPEN+Y  L KV EAK++
Sbjct: 343 MGLMKSIEKFKPQVGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRS 402

Query: 723 CFQQGNRNPSRE 758
              +GN NP++E
Sbjct: 403 YIMEGNHNPTKE 414


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530789|gb|ESR41972.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  278 bits (712), Expect = 1e-72
 Identities = 144/255 (56%), Positives = 180/255 (70%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRSTR LER++K+R+V KPKV   ET + RK
Sbjct: 173 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRK 232

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FDPNDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 233 ASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 292

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++       +SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 293 REPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 352

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 353 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 412

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 413 KRLYIQEGNHSPDKE 427


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530788|gb|ESR41971.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  278 bits (712), Expect = 1e-72
 Identities = 144/255 (56%), Positives = 180/255 (70%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRSTR LER++K+R+V KPKV   ET + RK
Sbjct: 181 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRK 240

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FDPNDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 241 ASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++       +SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 301 REPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 360

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 361 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 420

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 421 KRLYIQEGNHSPDKE 435


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
           gi|557530787|gb|ESR41970.1| hypothetical protein
           CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  278 bits (712), Expect = 1e-72
 Identities = 144/255 (56%), Positives = 180/255 (70%), Gaps = 3/255 (1%)
 Frame = +3

Query: 3   AKDAGISGINVDDSSSTRGLA---SDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRK 173
           A++  ++G    D S T  L     +   VRSTR LER++K+R+V KPKV   ET + RK
Sbjct: 170 AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRK 229

Query: 174 PGSHRKLDSRFDPNDPLRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFS 353
               +KL   FDPNDPLRLFL GP              I +IQDL++L+  K++L +QF 
Sbjct: 230 ASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 289

Query: 354 CEPTILEWAAAVGISCQSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQ 533
            EPT++       +SC+ LKS++H GN SR+KLI AN R+VVH+AKQYQGRG+ L DLLQ
Sbjct: 290 REPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 349

Query: 534 EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEA 713
           EGS+GLMKSVEKFKPQAGCRFA+YAYWW+RQ IRKAIFQHSRTIRLPENIY LLS+V EA
Sbjct: 350 EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 409

Query: 714 KKTCFQQGNRNPSRE 758
           K+   Q+GN +P +E
Sbjct: 410 KRLYIQEGNHSPDKE 424


>ref|XP_006293948.1| hypothetical protein CARUB_v10022939mg [Capsella rubella]
           gi|482562656|gb|EOA26846.1| hypothetical protein
           CARUB_v10022939mg [Capsella rubella]
          Length = 456

 Score =  273 bits (697), Expect = 6e-71
 Identities = 144/239 (60%), Positives = 169/239 (70%)
 Frame = +3

Query: 42  SSSTRGLASDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFDPNDP 221
           +SS+  L  +  IVRS RLLER+AK RR PK      E    +K  + +K     D +D 
Sbjct: 175 TSSSMSLPEEGTIVRSKRLLERRAKNRRAPKSNDVDNEGYVPQKSNAKKKFKQGVDTDDA 234

Query: 222 LRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAVGISC 401
           L+LFL GP              I  IQ L+KL+ VKT+L +Q  CEPTI EWA A+GIS 
Sbjct: 235 LQLFLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISS 294

Query: 402 QSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEKFKPQ 581
             LKS+IH G  SR+KLI AN R+VVHIAKQYQ RGLN QDLLQEGS+GLMKSVEKFKPQ
Sbjct: 295 PVLKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQ 354

Query: 582 AGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNPSRE 758
           +GCRFATYAYWWIRQ IRK+IFQ+SRTIRLPEN+Y LL KV EA+KTC Q+GN  PS+E
Sbjct: 355 SGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKE 413


>ref|XP_006293947.1| hypothetical protein CARUB_v10022939mg [Capsella rubella]
           gi|482562655|gb|EOA26845.1| hypothetical protein
           CARUB_v10022939mg [Capsella rubella]
          Length = 547

 Score =  273 bits (697), Expect = 6e-71
 Identities = 144/239 (60%), Positives = 169/239 (70%)
 Frame = +3

Query: 42  SSSTRGLASDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFDPNDP 221
           +SS+  L  +  IVRS RLLER+AK RR PK      E    +K  + +K     D +D 
Sbjct: 175 TSSSMSLPEEGTIVRSKRLLERRAKNRRAPKSNDVDNEGYVPQKSNAKKKFKQGVDTDDA 234

Query: 222 LRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAVGISC 401
           L+LFL GP              I  IQ L+KL+ VKT+L +Q  CEPTI EWA A+GIS 
Sbjct: 235 LQLFLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISS 294

Query: 402 QSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEKFKPQ 581
             LKS+IH G  SR+KLI AN R+VVHIAKQYQ RGLN QDLLQEGS+GLMKSVEKFKPQ
Sbjct: 295 PVLKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQ 354

Query: 582 AGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNPSRE 758
           +GCRFATYAYWWIRQ IRK+IFQ+SRTIRLPEN+Y LL KV EA+KTC Q+GN  PS+E
Sbjct: 355 SGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKE 413


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|557112044|gb|ESQ52328.1| hypothetical protein
           EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  271 bits (692), Expect = 2e-70
 Identities = 143/239 (59%), Positives = 168/239 (70%)
 Frame = +3

Query: 42  SSSTRGLASDPVIVRSTRLLERQAKRRRVPKPKVEFLETNHHRKPGSHRKLDSRFDPNDP 221
           +SS+  L     IVRS R LER+AK RR PK      E    +K  + +K+   FD +D 
Sbjct: 174 TSSSMSLPEKGTIVRSKRQLERRAKNRRAPKSNNMDSEGYVPQKINAKKKMKQGFDTDDA 233

Query: 222 LRLFLRGPXXXXXXXXXXXXXXIMKIQDLMKLQVVKTRLHAQFSCEPTILEWAAAVGISC 401
           L+LFL GP              I  IQ L+KL+ VKT+L +Q  CEPTI EWA A+G+S 
Sbjct: 234 LQLFLWGPETKQLLTAKEEAELIAHIQHLIKLEKVKTKLESQNGCEPTIGEWAEAMGLSS 293

Query: 402 QSLKSQIHIGNISRQKLIYANFRMVVHIAKQYQGRGLNLQDLLQEGSLGLMKSVEKFKPQ 581
             LKS+IH G  SR+KLI AN R+VVHIAKQYQ RGLN QDLLQEGS+GLMKSVEKFKPQ
Sbjct: 294 PVLKSEIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQ 353

Query: 582 AGCRFATYAYWWIRQGIRKAIFQHSRTIRLPENIYGLLSKVYEAKKTCFQQGNRNPSRE 758
           +GCRFATYAYWWIRQ IRK+IFQ+SRTIRLPEN+Y LL KV EA+KTC Q GN  PS+E
Sbjct: 354 SGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKE 412