BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00018311
         (1643 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42076.1| hypothetical protein MIMGU_mgv1a000356mg [Mimulus...   830   0.0  
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   730   0.0  
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   729   0.0  
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              728   0.0  
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   723   0.0  
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   722   0.0  
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ...   716   0.0  
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   704   0.0  
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu...   704   0.0  
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma...   702   0.0  
ref|XP_007139315.1| hypothetical protein PHAVU_008G019000g [Phas...   701   0.0  
ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prun...   699   0.0  
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma...   696   0.0  
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma...   691   0.0  
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma...   691   0.0  
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...   689   0.0  
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   689   0.0  
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   688   0.0  
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...   679   0.0  
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...   674   0.0  

>gb|EYU42076.1| hypothetical protein MIMGU_mgv1a000356mg [Mimulus guttatus]
          Length = 1220

 Score =  830 bits (2144), Expect = 0.0
 Identities = 424/553 (76%), Positives = 460/553 (83%), Gaps = 9/553 (1%)
 Frame = +2

Query: 2    SGDNNSAVQMPNSNST-GVAPSTSGVLPFSSMLGQKPAGIV--PCQAVSAEEPGKVRMKP 172
            S D  S  Q+ NSNS  G  PS  GV+P SS +GQ  AG V  P QAVS EE GKVRMKP
Sbjct: 672  SDDIKSMTQISNSNSVLGAVPSPVGVMPLSSTIGQISAGTVQIPSQAVSVEESGKVRMKP 731

Query: 173  RDPRRILHNNTPHKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQMEKVVSSGTVKPPDI 352
            RDPRR+LHNN P K  T+V+D PK +AS  S    +++  +QEDQ+E  +SS ++KPPDI
Sbjct: 732  RDPRRVLHNNAPQKDVTSVADQPKADASFGS----AMNTPKQEDQLENKMSSSSMKPPDI 787

Query: 353  TMQFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQ-----AGTDTKIVVNESVNFRSGS 517
            TMQFTNNLRNIAD++SVSQ    S +L    S +       AG +T+  + E  N R+ +
Sbjct: 788  TMQFTNNLRNIADLLSVSQICTTSPVLAQIPSLQPAQGDLIAGKETRGPIAEYGNIRNVT 847

Query: 518  NLT-SEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXX 694
            ++T SEAATS PPRPLNANAWSDVEHLF+GFDDQQK AIQRERARRLEEQNK+FA  K  
Sbjct: 848  DITTSEAATSSPPRPLNANAWSDVEHLFEGFDDQQKVAIQRERARRLEEQNKLFAVRKLC 907

Query: 695  XXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNF 874
                      NSAKFVEVDP HDEMLRKKEEQDREKP+RHLFRFPHMGMWTKLRPG+WNF
Sbjct: 908  LVLDLDHTLLNSAKFVEVDPQHDEMLRKKEEQDREKPHRHLFRFPHMGMWTKLRPGVWNF 967

Query: 875  LEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKD 1054
            LEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDR PKSKD
Sbjct: 968  LEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRAPKSKD 1027

Query: 1055 LEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERP 1234
            LEGVLGMES VVIIDDS+RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERP
Sbjct: 1028 LEGVLGMESGVVIIDDSIRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERP 1087

Query: 1235 EEGTLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANP 1414
            E+GTLAS   VIERIHE FFGH+SL+EADVRNILA EQ+KILAGCRIVFSRVFPVGEA P
Sbjct: 1088 EDGTLASCSTVIERIHENFFGHESLNEADVRNILASEQRKILAGCRIVFSRVFPVGEAKP 1147

Query: 1415 HMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLY 1594
            HMHPLWQTAEQFGAVC NQIDE VTHVVANSLGTDKVNWALS G+FVVHPGWVEASALLY
Sbjct: 1148 HMHPLWQTAEQFGAVCINQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLY 1207

Query: 1595 RRANEHDFAIKQQ 1633
            RRANEHDFAIKQQ
Sbjct: 1208 RRANEHDFAIKQQ 1220


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Vitis vinifera]
          Length = 1238

 Score =  730 bits (1885), Expect = 0.0
 Identities = 387/548 (70%), Positives = 427/548 (77%), Gaps = 6/548 (1%)
 Frame = +2

Query: 2    SGDN-NSAVQMPNSNST-GVAPSTSGVLPFSSMLGQKPAGIVPC-QAVSAEEPGKVRMKP 172
            SGD   + V  P SNS  GV P  S      S LGQKPAG +   Q    +E GKVRMKP
Sbjct: 703  SGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMDESGKVRMKP 762

Query: 173  RDPRRILHNNTPHKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQME-KVVSSGTVKPPD 349
            RDPRRILH N+  +  ++ S+  KTNA            ++QEDQ E K V S +V PPD
Sbjct: 763  RDPRRILHANSFQRSGSSGSEQFKTNA------------QKQEDQTETKSVPSHSVNPPD 810

Query: 350  ITMQFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTS 529
            I+ QFT NL+NIAD+MS SQAS  +   P  +SS+       ++ V  +V+  SG  LT+
Sbjct: 811  ISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVS-DSGDQLTA 869

Query: 530  EAAT--SIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXX 703
              +   S    P + N W DVEHLFDG+DDQQKAAIQRERARR+EEQ KMF+A K     
Sbjct: 870  NGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLCLVL 929

Query: 704  XXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEK 883
                   NSAKFVEVDP+HDE+LRKKEEQDREK  RHLFRFPHMGMWTKLRPGIWNFLEK
Sbjct: 930  DLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNFLEK 989

Query: 884  ASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEG 1063
            ASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GDDG+  D D+RVPKSKDLEG
Sbjct: 990  ASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKDLEG 1049

Query: 1064 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEG 1243
            VLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERPE+G
Sbjct: 1050 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEDG 1109

Query: 1244 TLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMH 1423
            TLASSLAVIERIH+ FF + +LDE DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+H
Sbjct: 1110 TLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLH 1169

Query: 1424 PLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRA 1603
            PLWQTAE FGAVCTNQIDEQVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLYRRA
Sbjct: 1170 PLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRA 1229

Query: 1604 NEHDFAIK 1627
            NE DFAIK
Sbjct: 1230 NEQDFAIK 1237


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  729 bits (1883), Expect = 0.0
 Identities = 380/548 (69%), Positives = 435/548 (79%), Gaps = 9/548 (1%)
 Frame = +2

Query: 11   NNSAVQMPNSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRI 190
            +NS + + +S +   +PS + V   SS +  KPAG +  Q  S +E GK+RMKPRDPRR+
Sbjct: 748  SNSLLGVVSSTNVIPSPSVNNVPSISSGISSKPAGNL--QVPSPDESGKIRMKPRDPRRV 805

Query: 191  LHNNTPHKGSTAVSDLPKTNASSLSVIMGS---LSAKEQEDQME-KVVSSGTVKPPDITM 358
            LH N+  +  +   D  KTN +  S   GS   L+A++ + Q E K + S  V PPDIT 
Sbjct: 806  LHGNSLQRSGSMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDITQ 865

Query: 359  QFTNNLRNIADIMSVSQA--SMPST---ILPLSVSSEQQAGTDTKIVVNESVNFRSGSNL 523
            QFTNNL+NIADIMSVSQA  S+P     ++P  V  +  +  D K +V+ S + ++G+ L
Sbjct: 866  QFTNNLKNIADIMSVSQALTSLPPVSHNLVPQPVLIKSDS-MDMKALVSNSEDQQTGAGL 924

Query: 524  TSEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXX 703
              EA  +    P + NAW DVEHLF+ +DDQQKAAIQRERARR+EEQ KMF+A K     
Sbjct: 925  APEAGAT---GPRSQNAWGDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVL 981

Query: 704  XXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEK 883
                   NSAKF+EVDP+H+E+LRKKEEQDREKP RHLFRF HMGMWTKLRPGIWNFLEK
Sbjct: 982  DLDHTLLNSAKFIEVDPVHEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEK 1041

Query: 884  ASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEG 1063
            ASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+PFD D+RVP+SKDLEG
Sbjct: 1042 ASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEG 1101

Query: 1064 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEG 1243
            VLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GPSLLEIDHDERPE+G
Sbjct: 1102 VLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDG 1161

Query: 1244 TLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMH 1423
            TLASSLAVIERIH+ FF H +LD+ DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+H
Sbjct: 1162 TLASSLAVIERIHQDFFSHQNLDDVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLH 1221

Query: 1424 PLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRA 1603
            PLWQTAEQFGAVCTNQIDE VTHVVANSLGTDKVNWALS G+FVVHPGWVEASALLYRRA
Sbjct: 1222 PLWQTAEQFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRA 1281

Query: 1604 NEHDFAIK 1627
            NE DFAIK
Sbjct: 1282 NEVDFAIK 1289


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  728 bits (1879), Expect = 0.0
 Identities = 386/551 (70%), Positives = 426/551 (77%), Gaps = 9/551 (1%)
 Frame = +2

Query: 2    SGDN-NSAVQMPNSNST-GVAPSTSGVLPFSSMLGQKPAGIVPCQAVSA----EEPGKVR 163
            SGD   + V  P SNS  GV P  S      S LGQKPAG +           +E GKVR
Sbjct: 646  SGDPAKNTVLPPTSNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDESGKVR 705

Query: 164  MKPRDPRRILHNNTPHKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQME-KVVSSGTVK 340
            MKPRDPRRILH N+  +  ++ S+  KTNA            ++QEDQ E K V S +V 
Sbjct: 706  MKPRDPRRILHANSFQRSGSSGSEQFKTNA------------QKQEDQTETKSVPSHSVN 753

Query: 341  PPDITMQFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSN 520
            PPDI+ QFT NL+NIAD+MS SQAS  +   P  +SS+       ++ V  +V+  SG  
Sbjct: 754  PPDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVS-DSGDQ 812

Query: 521  LTSEAAT--SIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXX 694
            LT+  +   S    P + N W DVEHLFDG+DDQQKAAIQRERARR+EEQ KMF+A K  
Sbjct: 813  LTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSARKLC 872

Query: 695  XXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNF 874
                      NSAKFVEVDP+HDE+LRKKEEQDREK  RHLFRFPHMGMWTKLRPGIWNF
Sbjct: 873  LVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGIWNF 932

Query: 875  LEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKD 1054
            LEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVIS+GDDG+  D D+RVPKSKD
Sbjct: 933  LEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVPKSKD 992

Query: 1055 LEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERP 1234
            LEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERP
Sbjct: 993  LEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERP 1052

Query: 1235 EEGTLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANP 1414
            E+GTLASSLAVIERIH+ FF + +LDE DVRNILA EQ+KILAGCRIVFSRVFPVGEANP
Sbjct: 1053 EDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFPVGEANP 1112

Query: 1415 HMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLY 1594
            H+HPLWQTAE FGAVCTNQIDEQVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLY
Sbjct: 1113 HLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLY 1172

Query: 1595 RRANEHDFAIK 1627
            RRANE DFAIK
Sbjct: 1173 RRANEQDFAIK 1183


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  723 bits (1865), Expect = 0.0
 Identities = 369/535 (68%), Positives = 419/535 (78%), Gaps = 9/535 (1%)
 Frame = +2

Query: 50   GVAPSTSGVLPFSSMLGQKPAGIV--PCQAVSAEEPGKVRMKPRDPRRILHNNTPHKGST 223
            G  PST  + P SS +GQ+  GI+  P    SA+E   VRMKPRDPRR+LHN    KG  
Sbjct: 689  GAVPSTDAIAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRRVLHNTAVLKGGN 748

Query: 224  AVSDLPKTNASSLSVIMGSLSAKEQEDQME-KVVSSGTVKPPDITMQFTNNLRNIADIMS 400
              SD  KT  +     + +L  + QEDQ++ K   + +  PPDI  QFT NL+NIAD++S
Sbjct: 749  VGSDQCKTGVAGTHATISNLGFQSQEDQLDRKSAVTLSTTPPDIARQFTKNLKNIADMIS 808

Query: 401  VSQASMPSTILPLSVSSE------QQAGTDTKIVVNESVNFRSGSNLTSEAATSIPPRPL 562
            VS    PST L  +  ++       Q+ ++ K  V+E     + + L SE  +    +P 
Sbjct: 809  VS----PSTSLSAASQTQTQCLQSHQSRSEGKEAVSEPSERVNDAGLASEKGSPGSLQP- 863

Query: 563  NANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXNSAKFV 742
               +W DVEHLF+G+ DQQ+A IQRERARRLEEQ KMF+  K            NSAKFV
Sbjct: 864  -QISWGDVEHLFEGYSDQQRADIQRERARRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFV 922

Query: 743  EVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMG 922
            E+DP+H+E+LRKKEEQDREKP RHLFRFPHMGMWTKLRPGIWNFLEKAS L+ELHLYTMG
Sbjct: 923  EIDPVHEEILRKKEEQDREKPCRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMG 982

Query: 923  NKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDD 1102
            NK YATEMAKLLDPKG+LF+GRVISRGDDG+PFD D+RVPKSKDLEGVLGMESAVVIIDD
Sbjct: 983  NKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDD 1042

Query: 1103 SVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAVIERIH 1282
            SVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLAS L VI+RIH
Sbjct: 1043 SVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIH 1102

Query: 1283 EIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVC 1462
            + FF H S+DEADVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HPLWQTAEQFGAVC
Sbjct: 1103 QNFFAHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC 1162

Query: 1463 TNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            T+QID+QVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1163 TSQIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIK 1217


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum lycopersicum]
          Length = 1211

 Score =  722 bits (1864), Expect = 0.0
 Identities = 368/543 (67%), Positives = 423/543 (77%), Gaps = 5/543 (0%)
 Frame = +2

Query: 14   NSAVQMPNSNSTGVAPSTSGVLPFSSMLGQKPAGIV--PCQAVSAEEPGKVRMKPRDPRR 187
            N+A    + +  G  PST  V P SS +GQ+  GI+  P    SA+E   VRMKPRDPRR
Sbjct: 670  NTAQASSSKSILGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRR 729

Query: 188  ILHNNTPHKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQME-KVVSSGTVKPPDITMQF 364
            +LH+    KG +   D  KT  +     + +LS + QEDQ++ K   + +  PPDI  QF
Sbjct: 730  VLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQF 789

Query: 365  TNNLRNIADIMSVSQASMPSTILPLSVSSEQ--QAGTDTKIVVNESVNFRSGSNLTSEAA 538
            T NL+NIAD++SVS ++ PS          Q  Q+ ++ K  V+E   + + + L SE  
Sbjct: 790  TKNLKNIADMISVSPSTSPSVASQTQTLCIQAYQSRSEVKGAVSEPSEWVNDAGLASEKG 849

Query: 539  TSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXX 718
            +    +P    +W DVEHLF+G+ DQQ+A IQRER RRLEEQ KMF+  K          
Sbjct: 850  SPGSLQP--QISWGDVEHLFEGYSDQQRADIQRERTRRLEEQKKMFSVRKLCLVLDLDHT 907

Query: 719  XXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 898
              NSAKFVE+DP+H+E+LRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKAS L+
Sbjct: 908  LLNSAKFVEIDPVHEEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLF 967

Query: 899  ELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGME 1078
            ELHLYTMGNK YATEMAKLLDPKG+LF+GRVISRGDDG+PFD D+RVPKSKDLEGVLGME
Sbjct: 968  ELHLYTMGNKLYATEMAKLLDPKGDLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME 1027

Query: 1079 SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASS 1258
            SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLAS 
Sbjct: 1028 SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASC 1087

Query: 1259 LAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQT 1438
            L VI+RIH+ FF H S+DEADVRNILA EQ+KILAGCRIVFSRVFPVGEA+PH+HPLWQT
Sbjct: 1088 LGVIQRIHQNFFTHRSIDEADVRNILATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQT 1147

Query: 1439 AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDF 1618
            AEQFGAVCT+QID+QVTHVVANSLGTDKVNWALS GR VVHPGWVEASALLYRRANEHDF
Sbjct: 1148 AEQFGAVCTSQIDDQVTHVVANSLGTDKVNWALSTGRSVVHPGWVEASALLYRRANEHDF 1207

Query: 1619 AIK 1627
            AIK
Sbjct: 1208 AIK 1210


>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
            gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
            phosphatase, putative [Ricinus communis]
          Length = 1195

 Score =  716 bits (1849), Expect = 0.0
 Identities = 377/543 (69%), Positives = 429/543 (79%), Gaps = 12/543 (2%)
 Frame = +2

Query: 35   NSNST-GVAP----STSGVLPFSSMLGQKPAGIVPC--QAVSAEEPGKVRMKPRDPRRIL 193
            NSNS  G  P    + SG+LP       +PAG V    Q  +A++ GK+RMKPRDPRR+L
Sbjct: 666  NSNSMLGTVPVVGAAHSGILP-------RPAGTVQVSPQLGTADDLGKIRMKPRDPRRVL 718

Query: 194  HNNTPHKGSTAVSDLPKTNASSLSV---IMGSLSAKEQEDQMEKV-VSSGTVKPPDITMQ 361
            HNN   +  +  S+  KTN +S+ +      + + ++QE Q+EK  V   ++  PDI+M 
Sbjct: 719  HNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQSLALPDISMP 778

Query: 362  FTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRS-GSNLTSEAA 538
            FT NL+NIADI+SVS AS    ++P + +S+    T     ++ S  F   GS   + AA
Sbjct: 779  FTKNLKNIADIVSVSHASTSQPLVPQNPASQPMRTT-----ISSSDQFLGIGSAPGAAAA 833

Query: 539  TSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXX 718
             +  PR    NAW DVEHLF+G++DQQKAAIQRERARR+EEQ K+F+A K          
Sbjct: 834  AAAGPR--TQNAWGDVEHLFEGYNDQQKAAIQRERARRIEEQKKLFSARKLCLVLDLDHT 891

Query: 719  XXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 898
              NSAKFVEVDP+HDE+LRKKEEQDREK +RHLFRFPHMGMWTKLRPGIWNFLEKASKLY
Sbjct: 892  LLNSAKFVEVDPVHDEILRKKEEQDREKAHRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 951

Query: 899  ELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGME 1078
            ELHLYTMGNK YATEMAK+LDP G LF+GRVISRGDDGEPFD D+R+PKSKDLEGVLGME
Sbjct: 952  ELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGDDGEPFDGDERIPKSKDLEGVLGME 1011

Query: 1079 SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASS 1258
            S VVI+DDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLA S
Sbjct: 1012 SGVVIMDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACS 1071

Query: 1259 LAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQT 1438
            LAVIERIH+ FF H SLDEADVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HPLWQT
Sbjct: 1072 LAVIERIHQNFFTHPSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQT 1131

Query: 1439 AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDF 1618
            AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALS GRFVV+PGWVEASALLYRRANE DF
Sbjct: 1132 AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDF 1191

Query: 1619 AIK 1627
            AIK
Sbjct: 1192 AIK 1194


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  704 bits (1817), Expect = 0.0
 Identities = 360/533 (67%), Positives = 410/533 (76%)
 Frame = +2

Query: 29   MPNSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRILHNNTP 208
            +P  N+    PS  G+LP S+   Q P+     Q  + +E GK+RMKPRDPRR+LHNN  
Sbjct: 723  IPEVNAVSSLPS--GILPRSAGKAQGPS-----QIATTDESGKIRMKPRDPRRVLHNNAL 775

Query: 209  HKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQMEKVVSSGTVKPPDITMQFTNNLRNIA 388
             +  +  S+  KT   + S   G+   +  + Q E +     V PPDI+  FT +L+NIA
Sbjct: 776  QRAGSLGSEQFKTTTLT-STTQGTKDNQNLQKQ-EGLAELKPVVPPDISSPFTKSLKNIA 833

Query: 389  DIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTSEAATSIPPRPLNA 568
            DI+SVSQ       +  +V+S+       ++     ++        + +   +    L+ 
Sbjct: 834  DIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQ 893

Query: 569  NAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXNSAKFVEV 748
            N W DVEHLF+G+DDQQKAAIQRERARR+EEQ K+FAA K            NSAKFVEV
Sbjct: 894  NTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEV 953

Query: 749  DPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 928
            DP+HDE+LRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK
Sbjct: 954  DPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 1013

Query: 929  YYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSV 1108
             YATEMAK+LDPKG LF+GRV+SRGDDG+  D D+RVPKSKDLEGVLGMES VVIIDDS+
Sbjct: 1014 LYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSL 1073

Query: 1109 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAVIERIHEI 1288
            RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLA SLAVIERIH+ 
Sbjct: 1074 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQN 1133

Query: 1289 FFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVCTN 1468
            FF H SLDEADVRNILA EQ+KILAGCRIVFSRVFPVGE NPH+HPLWQ+AEQFGAVCTN
Sbjct: 1134 FFTHHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTN 1193

Query: 1469 QIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            QIDEQVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1194 QIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1246


>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343307|gb|EEE79693.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1030

 Score =  704 bits (1817), Expect = 0.0
 Identities = 360/533 (67%), Positives = 410/533 (76%)
 Frame = +2

Query: 29   MPNSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRILHNNTP 208
            +P  N+    PS  G+LP S+   Q P+     Q  + +E GK+RMKPRDPRR+LHNN  
Sbjct: 506  IPEVNAVSSLPS--GILPRSAGKAQGPS-----QIATTDESGKIRMKPRDPRRVLHNNAL 558

Query: 209  HKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQMEKVVSSGTVKPPDITMQFTNNLRNIA 388
             +  +  S+  KT   + S   G+   +  + Q E +     V PPDI+  FT +L+NIA
Sbjct: 559  QRAGSLGSEQFKTTTLT-STTQGTKDNQNLQKQ-EGLAELKPVVPPDISSPFTKSLKNIA 616

Query: 389  DIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTSEAATSIPPRPLNA 568
            DI+SVSQ       +  +V+S+       ++     ++        + +   +    L+ 
Sbjct: 617  DIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGKTGISNSDQKMGPASSPEVVAASSLSQ 676

Query: 569  NAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXNSAKFVEV 748
            N W DVEHLF+G+DDQQKAAIQRERARR+EEQ K+FAA K            NSAKFVEV
Sbjct: 677  NTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARKLCLVLDLDHTLLNSAKFVEV 736

Query: 749  DPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 928
            DP+HDE+LRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK
Sbjct: 737  DPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 796

Query: 929  YYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSV 1108
             YATEMAK+LDPKG LF+GRV+SRGDDG+  D D+RVPKSKDLEGVLGMES VVIIDDS+
Sbjct: 797  LYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKSKDLEGVLGMESGVVIIDDSL 856

Query: 1109 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAVIERIHEI 1288
            RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLA SLAVIERIH+ 
Sbjct: 857  RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSLAVIERIHQN 916

Query: 1289 FFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVCTN 1468
            FF H SLDEADVRNILA EQ+KILAGCRIVFSRVFPVGE NPH+HPLWQ+AEQFGAVCTN
Sbjct: 917  FFTHHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVNPHLHPLWQSAEQFGAVCTN 976

Query: 1469 QIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            QIDEQVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 977  QIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFAIK 1029


>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1261

 Score =  702 bits (1811), Expect = 0.0
 Identities = 370/547 (67%), Positives = 422/547 (77%), Gaps = 9/547 (1%)
 Frame = +2

Query: 14   NSAVQMPNSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRIL 193
            +S   + +S +TG+  S+ G+LP SS        +        ++ GK+RMKPRDPRRIL
Sbjct: 723  DSTASIGSSMATGLLQSSVGMLPVSSQSTSTAQTL-------QDDSGKIRMKPRDPRRIL 775

Query: 194  H-NNTPHKGSTAVSDLPKTNASSLSVIM---GSLSAKEQEDQME-KVVSSGTVKPPDITM 358
            H NNT  K     ++  K   S +S       +++A + E +++ K+V + +   PDI  
Sbjct: 776  HTNNTIQKSGDLGNEQFKAIVSPVSNNQRTGDNVNAPKLEGRVDNKLVPTQSSAQPDIAR 835

Query: 359  QFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGT----DTKIVVNESVNFRSGSNLT 526
            QFT NL+NIADIMSVSQ S   T +  + SS     T    + K VV+ S N ++     
Sbjct: 836  QFTRNLKNIADIMSVSQESSTHTPVSQNFSSASVPLTSDRGEQKSVVSSSQNLQADMASA 895

Query: 527  SEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXX 706
             E A S+  R  + + W DVEHLF+G+D+QQKAAIQRERARR+EEQNKMFAA K      
Sbjct: 896  HETAASVTSR--SQSTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKMFAARKLCLVLD 953

Query: 707  XXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKA 886
                  NSAKFVEVDPLHDE+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPGIWNFLEKA
Sbjct: 954  LDHTLLNSAKFVEVDPLHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKA 1013

Query: 887  SKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGV 1066
            SKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDD +  D ++RVPKSKDLEGV
Sbjct: 1014 SKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTDSVDGEERVPKSKDLEGV 1073

Query: 1067 LGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGT 1246
            LGMES+VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERPE GT
Sbjct: 1074 LGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGT 1133

Query: 1247 LASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHP 1426
            LASSLAVIE+IH+IFF   SL+E DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HP
Sbjct: 1134 LASSLAVIEKIHQIFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHP 1193

Query: 1427 LWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRAN 1606
            LWQTAEQFGAVCTNQIDEQVTHVVANS GTDKVNWAL+ GRFVVHPGWVEASALLYRRAN
Sbjct: 1194 LWQTAEQFGAVCTNQIDEQVTHVVANSPGTDKVNWALNNGRFVVHPGWVEASALLYRRAN 1253

Query: 1607 EHDFAIK 1627
            E DFAIK
Sbjct: 1254 EQDFAIK 1260


>ref|XP_007139315.1| hypothetical protein PHAVU_008G019000g [Phaseolus vulgaris]
            gi|561012448|gb|ESW11309.1| hypothetical protein
            PHAVU_008G019000g [Phaseolus vulgaris]
          Length = 1272

 Score =  701 bits (1810), Expect = 0.0
 Identities = 374/566 (66%), Positives = 427/566 (75%), Gaps = 27/566 (4%)
 Frame = +2

Query: 11   NNSAVQMPN------SNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSA-------EEP 151
            NNSA    N      SNS     ST+ ++   +   Q   G++P  + S        +  
Sbjct: 713  NNSADSATNMLHPTSSNSAMGTDSTASIVSSMATGLQTSVGMLPVSSQSTSTAQLQDDYS 772

Query: 152  GKVRMKPRDPRRILH-NNTPHKGSTAVSDLPKTNASSLSVIM---GSLSAKEQEDQME-K 316
            GK+RMKPRDPRRILH NN+  K    V++L K   S +S I+    S++A++ E +M+ K
Sbjct: 773  GKIRMKPRDPRRILHTNNSVQKSGNIVNELHKAIVSPVSNILVTGDSVNAQKLEGRMDTK 832

Query: 317  VVSSGTVKPPDITMQFTNNLRNIADIMSVSQAS---------MPSTILPLSVSSEQQAGT 469
            +V + +   PDIT QFT NL+NIADIMSVSQ S           S  +PL+V   +Q   
Sbjct: 833  LVPTQSGAAPDITRQFTRNLKNIADIMSVSQESSTHSPAAQGFSSASVPLNVDRGEQ--- 889

Query: 470  DTKIVVNESVNFRSGSNLTSEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERAR 649
              K V++ S N  +G+    E     P    + + W DVEHLF+G+D+QQKAAIQRERAR
Sbjct: 890  --KSVLSNSQNLHAGTGSAPEICA--PGTSRSQSTWGDVEHLFEGYDEQQKAAIQRERAR 945

Query: 650  RLEEQNKMFAAGKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFP 829
            R+EEQNKMFAA K            NSAKFVEVDP+H+E+LRKKEE DREKP+RHLFRFP
Sbjct: 946  RIEEQNKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHEEILRKKEELDREKPHRHLFRFP 1005

Query: 830  HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDD 1009
            HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDD
Sbjct: 1006 HMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD 1065

Query: 1010 GEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFG 1189
             +  D ++R PKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFG
Sbjct: 1066 TDSVDGEERAPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFG 1125

Query: 1190 LPGPSLLEIDHDERPEEGTLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGC 1369
            LPGPSLLEIDHDERPE GTLASSLAVIER+H+ FF   SL+E DVRNILA EQ+KIL+GC
Sbjct: 1126 LPGPSLLEIDHDERPEAGTLASSLAVIERLHQNFFSSQSLEEVDVRNILASEQRKILSGC 1185

Query: 1370 RIVFSRVFPVGEANPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGR 1549
            RIVFSRVFPVGEANPH+HPLWQTAEQFGAVCTNQID+QVTHVVANSLGTDKVNWALS GR
Sbjct: 1186 RIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSTGR 1245

Query: 1550 FVVHPGWVEASALLYRRANEHDFAIK 1627
            FVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1246 FVVHPGWVEASALLYRRANEQDFAIK 1271


>ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
            gi|462422348|gb|EMJ26611.1| hypothetical protein
            PRUPE_ppa000589mg [Prunus persica]
          Length = 1085

 Score =  699 bits (1805), Expect = 0.0
 Identities = 370/546 (67%), Positives = 418/546 (76%), Gaps = 4/546 (0%)
 Frame = +2

Query: 2    SGDNNSAVQMPNSNSTGVAPSTSGVLPF-SSMLGQKPAGIVPCQAVSA--EEPGKVRMKP 172
            S D    +  P S+S+ +  +  G +P  +S + Q PAG +P  +  A  +E GKVRMKP
Sbjct: 544  SADPPKTMTHPTSSSSILVSAALGNVPSKTSGILQTPAGTLPVSSQKALMDESGKVRMKP 603

Query: 173  RDPRRILHNNTPHKGSTAVSDLPKTNASSLSVIMGSL-SAKEQEDQMEKVVSSGTVKPPD 349
            RDPRR LH N   K  +   +  +     LS I G+  +   Q D+  K+V+S ++  PD
Sbjct: 604  RDPRRALHGNALQKSGSLGQEQFRNIIPPLSAIQGNKDNLNGQADK--KLVTSQSLDAPD 661

Query: 350  ITMQFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTS 529
            IT QFT NL+NIADIMSVS  S    I   SVSS+       +I +      R  S   S
Sbjct: 662  ITRQFTKNLKNIADIMSVSNVSTSPAIASQSVSSQLVPIKPERIDLKPEEQ-RPESISAS 720

Query: 530  EAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXX 709
            EAA + P R  +   W DVEHLF+G+DDQQKAAIQRER RR+EEQ KMFAA K       
Sbjct: 721  EAAAAGPSR--SPVMWGDVEHLFEGYDDQQKAAIQRERTRRIEEQKKMFAAHKLCLVLDL 778

Query: 710  XXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKAS 889
                 NSAKFVEVDP+HDE+LRKKEEQDREKP RHLFRF HMGMWTKLRPGIWNFLEKAS
Sbjct: 779  DHTLLNSAKFVEVDPVHDEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKAS 838

Query: 890  KLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVL 1069
            +L+ELHLYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+P D D+R+PKSKDLEGVL
Sbjct: 839  QLFELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPEDGDERIPKSKDLEGVL 898

Query: 1070 GMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTL 1249
            GMESAVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GPSLLEIDHDER E+GTL
Sbjct: 899  GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERQEDGTL 958

Query: 1250 ASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPL 1429
            ASSLAVIE+IH++FF H SLDEADVRNILA EQ+KILAGCRIVFSRVFPVGE  PH+HPL
Sbjct: 959  ASSLAVIEKIHQLFFSHSSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVKPHLHPL 1018

Query: 1430 WQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANE 1609
            WQTAEQFGAVCTNQID+QVTHVVANSLGTDKVNWALS G++VVHPGWVEASALLYRRANE
Sbjct: 1019 WQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVEASALLYRRANE 1078

Query: 1610 HDFAIK 1627
             DFAIK
Sbjct: 1079 QDFAIK 1084


>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Glycine max]
          Length = 1257

 Score =  696 bits (1797), Expect = 0.0
 Identities = 369/547 (67%), Positives = 418/547 (76%), Gaps = 9/547 (1%)
 Frame = +2

Query: 14   NSAVQMPNSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRIL 193
            +S   + +S +TG+  S+ G+LP SS        +        ++ GK+RMKPRDPRRIL
Sbjct: 719  DSTASIGSSMATGLLQSSVGMLPVSSQSTSMTQTL-------QDDSGKIRMKPRDPRRIL 771

Query: 194  H-NNTPHKGSTAVSDLPKTNASSLSVIMGS---LSAKEQEDQME-KVVSSGTVKPPDITM 358
            H NNT  K     ++  K   S +S   G+   ++A++ E +++ K+V +     PDI  
Sbjct: 772  HTNNTIQKSGNLGNEQFKAIVSPVSNNQGTGDNVNAQKLEGRVDSKLVPTQPSAQPDIAR 831

Query: 359  QFTNNLRNIADIMSVSQASMPSTILPLSVSSEQQAGT----DTKIVVNESVNFRSGSNLT 526
            QF  NL+NIADIMSVSQ S   T +    SS     T    + K VV+ S N  +G    
Sbjct: 832  QFARNLKNIADIMSVSQESSTHTPVAQIFSSASVPLTSDRGEQKSVVSNSQNLEAGMVSA 891

Query: 527  SEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXX 706
             E A S   R  + N W DVEHLF+G+D+QQKAAIQRERARR+EEQNKMFAA K      
Sbjct: 892  HETAASGTCR--SQNTWGDVEHLFEGYDEQQKAAIQRERARRIEEQNKMFAARKLCLVLD 949

Query: 707  XXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKA 886
                  NSAKFVEVDP+HDE+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPGIWNFLEKA
Sbjct: 950  LDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWNFLEKA 1009

Query: 887  SKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGV 1066
            SKLYELHLYTMGNK YATEMAK+LDPKG LF+GRVISRGDD +  D ++R PKSKDLEGV
Sbjct: 1010 SKLYELHLYTMGNKLYATEMAKVLDPKGLLFAGRVISRGDDTDSVDGEERAPKSKDLEGV 1069

Query: 1067 LGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGT 1246
            LGMES+VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERPE GT
Sbjct: 1070 LGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGT 1129

Query: 1247 LASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHP 1426
            LASSLAVIE+IH+IFF   SL+E DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HP
Sbjct: 1130 LASSLAVIEKIHQIFFASRSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHP 1189

Query: 1427 LWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRAN 1606
            LWQTAEQFGA CTNQIDEQVTHVVANS GTDKVNWAL+ GRFVVHPGWVEASALLYRRAN
Sbjct: 1190 LWQTAEQFGAFCTNQIDEQVTHVVANSPGTDKVNWALNNGRFVVHPGWVEASALLYRRAN 1249

Query: 1607 EHDFAIK 1627
            E DFAIK
Sbjct: 1250 EQDFAIK 1256


>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X2 [Cicer arietinum]
          Length = 1227

 Score =  691 bits (1784), Expect = 0.0
 Identities = 361/542 (66%), Positives = 416/542 (76%), Gaps = 12/542 (2%)
 Frame = +2

Query: 44   STGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRILHNNTP-HKGS 220
            + G+  S+ G+LP S+        ++       E+ GK+RMKPRDPRRILH ++   K  
Sbjct: 696  TAGLPQSSVGMLPASTQAASMAHTLL-------EDSGKIRMKPRDPRRILHGSSSLQKSG 748

Query: 221  TAVSDLPKTNASSLSVIMGS---LSAKEQEDQME-KVVSSGTVKPPDITMQFTNNLRNIA 388
            +  S+  K+  S  S   G+   ++A++ + ++E K+  + +   PDIT QFT NL+NIA
Sbjct: 749  STGSEQSKSVVSPTSNNQGNGGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIA 808

Query: 389  DIMSVSQASMPSTILPLSVSSEQQAGT-------DTKIVVNESVNFRSGSNLTSEAATSI 547
            DIMSVSQ   PST LP +  +   A         + K  V  S N + G     E  T  
Sbjct: 809  DIMSVSQE--PSTQLPATTQNVSSASVPFTLDKAELKSGVPNSQNLQDGVGSAPE--TCA 864

Query: 548  PPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXN 727
            P    + + W+DVEHLF+G+D++QKAAIQRERARRLEEQNKMFA+ K            N
Sbjct: 865  PGSSRSQSTWADVEHLFEGYDEKQKAAIQRERARRLEEQNKMFASKKLCLVLDLDHTLLN 924

Query: 728  SAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH 907
            SAKFVEVDP+HDE+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELH
Sbjct: 925  SAKFVEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 984

Query: 908  LYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAV 1087
            LYTMGNK YATEMAK+LDPKG LF+GRVISRGDD E  D D+R PKSKDLEGV+GMES+V
Sbjct: 985  LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTESVDGDERAPKSKDLEGVMGMESSV 1044

Query: 1088 VIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAV 1267
            VI+DDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERPE GTLASSLAV
Sbjct: 1045 VIVDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAV 1104

Query: 1268 IERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQ 1447
            IERIH+ FF   SL+E DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HPLWQTAEQ
Sbjct: 1105 IERIHQNFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 1164

Query: 1448 FGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            FGAVC NQID+QVTHVVANSLGTDKVNWA+S GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1165 FGAVCINQIDDQVTHVVANSLGTDKVNWAISTGRFVVHPGWVEASALLYRRANEQDFAIK 1224

Query: 1628 QQ 1633
             +
Sbjct: 1225 PE 1226


>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like isoform X1 [Cicer arietinum]
          Length = 1247

 Score =  691 bits (1784), Expect = 0.0
 Identities = 361/542 (66%), Positives = 416/542 (76%), Gaps = 12/542 (2%)
 Frame = +2

Query: 44   STGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRILHNNTP-HKGS 220
            + G+  S+ G+LP S+        ++       E+ GK+RMKPRDPRRILH ++   K  
Sbjct: 716  TAGLPQSSVGMLPASTQAASMAHTLL-------EDSGKIRMKPRDPRRILHGSSSLQKSG 768

Query: 221  TAVSDLPKTNASSLSVIMGS---LSAKEQEDQME-KVVSSGTVKPPDITMQFTNNLRNIA 388
            +  S+  K+  S  S   G+   ++A++ + ++E K+  + +   PDIT QFT NL+NIA
Sbjct: 769  STGSEQSKSVVSPTSNNQGNGGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIA 828

Query: 389  DIMSVSQASMPSTILPLSVSSEQQAGT-------DTKIVVNESVNFRSGSNLTSEAATSI 547
            DIMSVSQ   PST LP +  +   A         + K  V  S N + G     E  T  
Sbjct: 829  DIMSVSQE--PSTQLPATTQNVSSASVPFTLDKAELKSGVPNSQNLQDGVGSAPE--TCA 884

Query: 548  PPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXN 727
            P    + + W+DVEHLF+G+D++QKAAIQRERARRLEEQNKMFA+ K            N
Sbjct: 885  PGSSRSQSTWADVEHLFEGYDEKQKAAIQRERARRLEEQNKMFASKKLCLVLDLDHTLLN 944

Query: 728  SAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELH 907
            SAKFVEVDP+HDE+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPG+WNFLEKASKLYELH
Sbjct: 945  SAKFVEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGVWNFLEKASKLYELH 1004

Query: 908  LYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAV 1087
            LYTMGNK YATEMAK+LDPKG LF+GRVISRGDD E  D D+R PKSKDLEGV+GMES+V
Sbjct: 1005 LYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDTESVDGDERAPKSKDLEGVMGMESSV 1064

Query: 1088 VIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAV 1267
            VI+DDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHDERPE GTLASSLAV
Sbjct: 1065 VIVDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAV 1124

Query: 1268 IERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQ 1447
            IERIH+ FF   SL+E DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HPLWQTAEQ
Sbjct: 1125 IERIHQNFFASQSLEEVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQ 1184

Query: 1448 FGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            FGAVC NQID+QVTHVVANSLGTDKVNWA+S GRFVVHPGWVEASALLYRRANE DFAIK
Sbjct: 1185 FGAVCINQIDDQVTHVVANSLGTDKVNWAISTGRFVVHPGWVEASALLYRRANEQDFAIK 1244

Query: 1628 QQ 1633
             +
Sbjct: 1245 PE 1246


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
            gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
            3 [Populus trichocarpa]
          Length = 1190

 Score =  689 bits (1779), Expect = 0.0
 Identities = 347/533 (65%), Positives = 401/533 (75%), Gaps = 8/533 (1%)
 Frame = +2

Query: 53   VAPSTSGVLPFSSMLGQKPAGI--------VPCQAVSAEEPGKVRMKPRDPRRILHNNTP 208
            ++ +  G +P  ++   +P+GI        VP Q  +++E GK+RMKPRDPRR LHNN+ 
Sbjct: 659  ISNTVLGAIPTVNVASSQPSGIFPRPAGTPVPSQIATSDESGKIRMKPRDPRRFLHNNSL 718

Query: 209  HKGSTAVSDLPKTNASSLSVIMGSLSAKEQEDQMEKVVSSGTVKPPDITMQFTNNLRNIA 388
             +  +  S+  KT  ++L+         +   + E +       PPDI+  FT +L NIA
Sbjct: 719  QRAGSMGSEQFKT--TTLTPTTQGTKDDQNVQKQEGLAELKPTVPPDISFPFTKSLENIA 776

Query: 389  DIMSVSQASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTSEAATSIPPRPLNA 568
            DI+SVSQAS     +  +V+S+       ++     ++        + +   +     + 
Sbjct: 777  DILSVSQASTTPPFISQNVASQPMQTKSERVDGKTGISISDQKTGPASSPEVVAASSHSQ 836

Query: 569  NAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXNSAKFVEV 748
            N W DVEHLF+G+DDQQKAAIQRERARRLEEQ KMFAA K            NSAK +  
Sbjct: 837  NTWKDVEHLFEGYDDQQKAAIQRERARRLEEQKKMFAARKLCLVLDLDHTLLNSAKAILS 896

Query: 749  DPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNK 928
              LHDE+LRKKEEQDREKPYRH+FR PHMGMWTKLRPGIWNFLEKASKL+ELHLYTMGNK
Sbjct: 897  SSLHDEILRKKEEQDREKPYRHIFRIPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNK 956

Query: 929  YYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSV 1108
             YATEMAK+LDPKG LF+GRVISRGDDG+PFD D+RVPKSKDLEGVLGMES VVIIDDSV
Sbjct: 957  LYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESGVVIIDDSV 1016

Query: 1109 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAVIERIHEI 1288
            RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLA S AVIE+IH+ 
Sbjct: 1017 RVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACSFAVIEKIHQN 1076

Query: 1289 FFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVCTN 1468
            FF H SLDEADVRNILA EQ+KIL GCRI+FSRVFPVGE NPH+HPLWQ AEQFGAVCTN
Sbjct: 1077 FFTHRSLDEADVRNILASEQRKILGGCRILFSRVFPVGEVNPHLHPLWQMAEQFGAVCTN 1136

Query: 1469 QIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            QIDEQVTHVVANSLGTDKVNWALS GR VVHPGWVEASALLYRRANE DF+IK
Sbjct: 1137 QIDEQVTHVVANSLGTDKVNWALSTGRIVVHPGWVEASALLYRRANEQDFSIK 1189


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  689 bits (1778), Expect = 0.0
 Identities = 363/578 (62%), Positives = 418/578 (72%), Gaps = 40/578 (6%)
 Frame = +2

Query: 14   NSAVQMPNSNSTGVAPSTSGVLPFSSMLGQKPAGIV--PCQAVSA--------------- 142
            N+A    + +  G  PST  V P SS +GQ+  GI+  P    SA               
Sbjct: 670  NTAQASSSKSILGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASAASSIYNLLMNDFIYS 729

Query: 143  --------------------EEPGKVRMKPRDPRRILHNNTPHKGSTAVSDLPKTNASSL 262
                                +E   VRMKPRDPRR+LH+    KG +   D  KT  +  
Sbjct: 730  VIFTASIAQFPFYFFLTFSRDEVAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKTGVAGT 789

Query: 263  SVIMGSLSAKEQEDQME-KVVSSGTVKPPDITMQFTNNLRNIADIMSVSQASMPSTILPL 439
               + +LS + QEDQ++ K   + +  PPDI  QFT NL+NIAD++SVS ++ PS     
Sbjct: 790  HATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMISVSPSTSPSVASQT 849

Query: 440  SVSSEQ--QAGTDTKIVVNESVNFRSGSNLTSEAATSIPPRPLNANAWSDVEHLFDGFDD 613
                 Q  Q+ ++ K  V+E   + + + L SE  +    +P    +W DVEHLF+G+ D
Sbjct: 850  QTLCIQAYQSRSEVKGAVSEPSEWVNDAGLASEKGSPGSLQP--QISWGDVEHLFEGYSD 907

Query: 614  QQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQD 793
            QQ+A IQRER RRLEEQ KMF+                   FVE+DP+H+E+LRKKEEQD
Sbjct: 908  QQRADIQRERTRRLEEQKKMFS-------------------FVEIDPVHEEILRKKEEQD 948

Query: 794  REKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGE 973
            REKPYRHLFRFPHMGMWTKLRPGIWNFLEKAS L+ELHLYTMGNK YATEMAKLLDPKG+
Sbjct: 949  REKPYRHLFRFPHMGMWTKLRPGIWNFLEKASNLFELHLYTMGNKLYATEMAKLLDPKGD 1008

Query: 974  LFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVER 1153
            LF+GRVISRGDDG+PFD D+RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVER
Sbjct: 1009 LFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVER 1068

Query: 1154 YIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLAVIERIHEIFFGHDSLDEADVRNI 1333
            YIYFPCSRRQFGLPGPSLLEIDHDERPE+GTLAS L VI+RIH+ FF H S+DEADVRNI
Sbjct: 1069 YIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFTHRSIDEADVRNI 1128

Query: 1334 LACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLG 1513
            LA EQ+KILAGCRIVFSRVFPVGEA+PH+HPLWQTAEQFGAVCT+QID+QVTHVVANSLG
Sbjct: 1129 LATEQKKILAGCRIVFSRVFPVGEASPHLHPLWQTAEQFGAVCTSQIDDQVTHVVANSLG 1188

Query: 1514 TDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAIK 1627
            TDKVNWALS GR VVHPGWVEASALLYRRANEHDFAIK
Sbjct: 1189 TDKVNWALSTGRSVVHPGWVEASALLYRRANEHDFAIK 1226


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score =  688 bits (1775), Expect = 0.0
 Identities = 362/542 (66%), Positives = 408/542 (75%), Gaps = 11/542 (2%)
 Frame = +2

Query: 35   NSNSTGVAPSTSGVLPFSSMLGQKPAGIVPCQAVSAEEPGKVRMKPRDPRRILHNNTPHK 214
            +S+   + P     +P  S+    P+GI+   +   +E GKVRMKPRDPRR+LH N   +
Sbjct: 703  DSSMNTMHPPIPSSIPPVSVTCSIPSGIL---SKPMDELGKVRMKPRDPRRVLHGNALQR 759

Query: 215  GSTAVSDLPKTNASSLSVIMGSLSAKEQEDQM----EKVVSSGTVKPPDITMQFTNNLRN 382
              +   +  KT+  S     GS      + Q+     K V S +V  PDIT QFT NL++
Sbjct: 760  SGSLGPEF-KTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKH 818

Query: 383  IADIMSVSQ-------ASMPSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTSEAAT 541
            IAD MSVSQ        S  S I P  + S    G D K VV    + ++G+    EA  
Sbjct: 819  IADFMSVSQPLTSEPMVSQNSPIQPGQIKS----GADMKAVVTNHDDKQTGTGSGPEAG- 873

Query: 542  SIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXX 721
              P      +AW DVEHLF+G+DDQQKAAIQ+ER RRLEEQ KMF+A K           
Sbjct: 874  --PVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTL 931

Query: 722  XNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYE 901
             NSAKF EVDP+HDE+LRKKEEQDREKP+RHLFRFPHMGMWTKLRPGIW FLE+ASKL+E
Sbjct: 932  LNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFE 991

Query: 902  LHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMES 1081
            +HLYTMGNK YATEMAK+LDPKG LF+GRVISRGDDG+PFD D+RVPKSKDLEGVLGMES
Sbjct: 992  MHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMES 1051

Query: 1082 AVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSL 1261
            AVVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GPSLLEIDHDER E+GTLASSL
Sbjct: 1052 AVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERSEDGTLASSL 1111

Query: 1262 AVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTA 1441
             VIER+H+IFF H SLD+ DVRNILA EQ+KILAGCRIVFSRVFPVGEANPH+HPLWQTA
Sbjct: 1112 GVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTA 1171

Query: 1442 EQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFA 1621
            EQFGAVCT  ID+QVTHVVANSLGTDKVNWALS GRFVVHPGWVEASALLYRRANE DFA
Sbjct: 1172 EQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFA 1231

Query: 1622 IK 1627
            IK
Sbjct: 1232 IK 1233


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis]
          Length = 1301

 Score =  679 bits (1753), Expect = 0.0
 Identities = 357/535 (66%), Positives = 402/535 (75%), Gaps = 23/535 (4%)
 Frame = +2

Query: 35   NSNSTGVAPSTSGVL---PFSSMLGQKPAGIVPCQAVSA------------EEPGKVRMK 169
            +S +T   P T+ +L   P  ++   K +GI+   AVS             +E GK+RMK
Sbjct: 733  SSKNTTHPPGTNSILGAAPLVNVAPSKASGILQTPAVSLPTTSQVATASMQDELGKIRMK 792

Query: 170  PRDPRRILHNNTPHKGSTAVSDLPKTNASSLSVIMGS---LSAKEQEDQMEKV-VSSGTV 337
            PRDPRR+LH N   K  +   +  K   SS+S   G+   L+   QE Q +K  V S  V
Sbjct: 793  PRDPRRVLHGNMLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQADKKQVPSQLV 852

Query: 338  KPPDITMQFTNNLRNIADIMSVSQASMPSTILPLSVSSE----QQAGTDTKIVVNESVNF 505
              PDI  QFT NLRNIAD+MSVSQAS     +  ++SS+    +    D K VV  S + 
Sbjct: 853  VQPDIARQFTKNLRNIADLMSVSQASTSPATVSQNLSSQPLPVKPDRGDVKAVVPNSEDQ 912

Query: 506  RSGSNLTSEAATSIPPRPLNANAWSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAG 685
             SG+N T E   ++P R    NAW DVEHLF+G+DD+QKAAIQRERARRLEEQ KMF A 
Sbjct: 913  HSGTNSTPETTLAVPSR--TPNAWGDVEHLFEGYDDEQKAAIQRERARRLEEQKKMFDAH 970

Query: 686  KXXXXXXXXXXXXNSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGI 865
            K            NSAKFVEVD +HDE+LRKKEEQDREKP RHLFRFPHMGMWTKLRPG+
Sbjct: 971  KLCLVLDLDHTLLNSAKFVEVDSVHDEILRKKEEQDREKPQRHLFRFPHMGMWTKLRPGV 1030

Query: 866  WNFLEKASKLYELHLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPK 1045
            WNFLEKASKLYELHLYTMGNK YATEMAK+LDP G LFSGRVISRGDDG+PFD D+RVPK
Sbjct: 1031 WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPMGTLFSGRVISRGDDGDPFDGDERVPK 1090

Query: 1046 SKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHD 1225
            SKDLEGVLGMES+VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGLPGPSLLEIDHD
Sbjct: 1091 SKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHD 1150

Query: 1226 ERPEEGTLASSLAVIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGE 1405
            ERPE+GTLASSLAVIE+IH+ FF H SLDE DVRNILA EQ+KILAGCRIVFSRVFPV E
Sbjct: 1151 ERPEQGTLASSLAVIEKIHQNFFSHHSLDEVDVRNILASEQRKILAGCRIVFSRVFPVSE 1210

Query: 1406 ANPHMHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGW 1570
             NPH+HPLWQTAEQFGAVCT QID+QVTHVVANS GTDKVNWAL+ G+F VHPGW
Sbjct: 1211 VNPHLHPLWQTAEQFGAVCTTQIDDQVTHVVANSPGTDKVNWALANGKFAVHPGW 1265


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score =  674 bits (1739), Expect = 0.0
 Identities = 348/541 (64%), Positives = 404/541 (74%), Gaps = 18/541 (3%)
 Frame = +2

Query: 59   PSTSGVLPFSSMLGQKPAGI--------VPCQAVSAEEPGKVRMKPRDPRRILHNNTPHK 214
            P +S  +P ++ L   P+          +  Q    +E GK+RMK RDPRR+LH N    
Sbjct: 696  PPSSSSIPGTAALVNDPSKTSGALLTPTICSQKTPTDEAGKIRMKLRDPRRLLHGNALQN 755

Query: 215  GSTAVSDLPKTNASSLSVIMGS---LSAKEQEDQMEK---VVSSGTVKPPDITMQFTNNL 376
              +   +  +     LS    +   ++ K+Q+ Q +       SG +  PDI  QFT NL
Sbjct: 756  SGSVGHEQSRNIVPPLSSSQANNDDMNGKKQDSQADNNSVTSQSGALGAPDIASQFTKNL 815

Query: 377  RNIADIMSVSQASM-PSTILPLSVSSEQQAGTDTKIVVNESVNFRSGSNLTSEAATSIPP 553
            +NIADI+SVSQ S  P+T         Q   T+   +  ++V+ ++    T   + S+P 
Sbjct: 816  KNIADIISVSQVSTSPAT-------PSQNLSTELISINPDNVDLKAEEQHTGSISASVPT 868

Query: 554  RPLNANA---WSDVEHLFDGFDDQQKAAIQRERARRLEEQNKMFAAGKXXXXXXXXXXXX 724
                + +   W DVEHLF+G+DD+QKAAIQRERARR+EEQ KMFAA K            
Sbjct: 869  AAGASRSPATWGDVEHLFEGYDDKQKAAIQRERARRIEEQKKMFAAHKLCLVLDLDHTLL 928

Query: 725  NSAKFVEVDPLHDEMLRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYEL 904
            NSAKFVEVDP+HDE+LRKKEEQDR++P RHLFRF HMGMWTKLRPG+W FLEKAS L+E+
Sbjct: 929  NSAKFVEVDPVHDEILRKKEEQDRKEPQRHLFRFQHMGMWTKLRPGVWKFLEKASHLFEM 988

Query: 905  HLYTMGNKYYATEMAKLLDPKGELFSGRVISRGDDGEPFDSDDRVPKSKDLEGVLGMESA 1084
            HLYTMGNK YATEMAK+LDP G LF+GRVISRGDDG+P+D D+RVPKSKDLEGVLGMESA
Sbjct: 989  HLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPYDGDERVPKSKDLEGVLGMESA 1048

Query: 1085 VVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEEGTLASSLA 1264
            VVIIDDSVRVWPHNKLNLIVVERY YFPCSRRQFGL GPSLLEIDHDER E+GTLASSLA
Sbjct: 1049 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERHEDGTLASSLA 1108

Query: 1265 VIERIHEIFFGHDSLDEADVRNILACEQQKILAGCRIVFSRVFPVGEANPHMHPLWQTAE 1444
            VIE+IH+IFF H SLDEADVRNILA EQQKIL GCRIVFSRVFPVGE NPH+HPLWQTAE
Sbjct: 1109 VIEKIHQIFFSHPSLDEADVRNILASEQQKILGGCRIVFSRVFPVGEVNPHLHPLWQTAE 1168

Query: 1445 QFGAVCTNQIDEQVTHVVANSLGTDKVNWALSRGRFVVHPGWVEASALLYRRANEHDFAI 1624
            QFGAVCTNQID+QVTHVVANSLGTDKVNWALS G++VVHPGWVEASALLYRRANE DFAI
Sbjct: 1169 QFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVEASALLYRRANEQDFAI 1228

Query: 1625 K 1627
            K
Sbjct: 1229 K 1229