BLASTX nr result
ID: Mentha26_contig00017987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00017987
(823 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus... 129 1e-27
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 115 3e-23
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 114 4e-23
dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica] 109 1e-21
dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea] 106 1e-20
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 106 1e-20
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 106 1e-20
dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35] 105 2e-20
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 105 2e-20
dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana] 105 2e-20
dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa] 105 2e-20
ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobro... 105 2e-20
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro... 105 2e-20
dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana] 104 3e-20
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 97 6e-18
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 97 6e-18
gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis] 93 1e-16
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 93 1e-16
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 91 5e-16
emb|CAB46363.1| DNA topoisomerase I [Daucus carota] 74 5e-11
>gb|EYU30724.1| hypothetical protein MIMGU_mgv1a001121mg [Mimulus guttatus]
Length = 883
Score = 129 bits (324), Expect = 1e-27
Identities = 85/190 (44%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDD-GPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNA 446
M VEA + + M+D+D+DD P+VFKR E K S QKH Q+GR + +
Sbjct: 1 MTVEAREDKNMMEDMDDDDDAPLVFKRSGSSSKPKQSEPENKLS-SQKHNAQVGRQSSDV 59
Query: 447 RPQNGQNNSVQKNK--TGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTG 620
RPQNG N + QK K T SS PP R L+ PK SNS + S +KS +V+S PSTS+ G
Sbjct: 60 RPQNGTNANAQKGKSVTSSSSMKPPVRPSLVSPKSSNSSVKASPIKSPDVNSKPSTSVVG 119
Query: 621 GLNSVKCQIKGENALNKFTSGPNEDSEDSEDDKPLSAR---FSKVNSGNANKGANTLNSG 791
SVK IK EN SEDSEDDKPLSAR S N+ N N N G
Sbjct: 120 ESKSVKSTIKEEN------------SEDSEDDKPLSARQVAGSSKNNPNQTNKPNAPNLG 167
Query: 792 QNSKIPKSED 821
+ S +PK ED
Sbjct: 168 KKSNVPKPED 177
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 115 bits (287), Expect = 3e-23
Identities = 73/192 (38%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+N+S QK + PS++TPP +SPL PK SNS + S + S +S PS S T
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPLSAR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 114 bits (285), Expect = 4e-23
Identities = 72/192 (37%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK Q+H Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQRHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+N+S QK + PS++TPP +SPL PK SNS + S + S +S PS S T
Sbjct: 61 PANGENSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSAGANSKPSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPLSAR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 109 bits (272), Expect = 1e-21
Identities = 72/192 (37%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTPNL-MEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 59
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS++TPP +SPL PK SNS + S + S +S PS S T
Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPLSAR SK S +ANK
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 180 SIRRRVIEESED 191
>dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
Length = 920
Score = 106 bits (264), Expect = 1e-20
Identities = 70/192 (36%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 106 bits (264), Expect = 1e-20
Identities = 70/192 (36%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 106 bits (264), Expect = 1e-20
Identities = 70/192 (36%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTPNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 105 bits (263), Expect = 2e-20
Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + + +SED
Sbjct: 181 SIRRPVVEESED 192
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 105 bits (263), Expect = 2e-20
Identities = 71/192 (36%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D GP++FKR E KK QK Q + R
Sbjct: 1 MAVEACTTNL-MEDMEDDGGPVIFKRSKPAPKQNQANSEKKKLSLQKQDGQSAVHTSDVR 59
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS++TPP +SPL PK SNS + S + S +S PS S T
Sbjct: 60 PANGESSSAQKGRIQPSAKTPPVKSPLSSPKASNSSAKASPITSPGANSKPSASATSTAK 119
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPLSAR SK S +ANK
Sbjct: 120 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLSARTFGCSSKGKSNHANKEGGDSC 179
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 180 SIRRPVIEESED 191
>dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 105 bits (263), Expect = 2e-20
Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + + +SED
Sbjct: 181 SIRRPVVEESED 192
>dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 105 bits (263), Expect = 2e-20
Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPASKQNQANSEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSAR----FSKVNSGNANKGANTLN 785
+ S P N +SE S+D+KPL AR SK S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPPAKANSNSESSDDEKPLIARTSGCSSKGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + + +SED
Sbjct: 181 SIRRPVVEESED 192
>ref|XP_007020666.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|590606159|ref|XP_007020668.1| DNA topoisomerase I
alpha isoform 3 [Theobroma cacao]
gi|508720294|gb|EOY12191.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao] gi|508720296|gb|EOY12193.1|
DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
Length = 836
Score = 105 bits (262), Expect = 2e-20
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXX-ETKKSLPQKHGQQLGRPALNA 446
MAVEA K D D+DDGP+VFKR E KK+ Q+ Q GR +
Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60
Query: 447 RPQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGL 626
R NGQ+++ KNK+ SS++PP +SP++ PK S S T+ VKS V+ STS+
Sbjct: 61 RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120
Query: 627 NSVKCQ-----IKGENALNKFTSGPNEDSEDSEDDKPLSARFSKVNSGNANKGANTLNSG 791
Q +K + K T+ PN D +D +D PLSAR + S NKGA+T
Sbjct: 121 KQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGI-SNQGNKGASTSAPA 179
Query: 792 QNSK-IPKSE 818
Q+ + +PK+E
Sbjct: 180 QSRRLVPKTE 189
>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
alpha isoform 1 [Theobroma cacao]
gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
Length = 904
Score = 105 bits (262), Expect = 2e-20
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXX-ETKKSLPQKHGQQLGRPALNA 446
MAVEA K D D+DDGP+VFKR E KK+ Q+ Q GR +
Sbjct: 1 MAVEAPAKHVYDFDDDDDDGPVVFKRNNTSSSKQNQLNSEVKKASSQRSDGQSGRQVSDV 60
Query: 447 RPQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGL 626
R NGQ+++ KNK+ SS++PP +SP++ PK S S T+ VKS V+ STS+
Sbjct: 61 RSPNGQSSNAPKNKSISSSKSPPVKSPILSPKASTSSTKALPVKSPVVNFKASTSLNDQS 120
Query: 627 NSVKCQ-----IKGENALNKFTSGPNEDSEDSEDDKPLSARFSKVNSGNANKGANTLNSG 791
Q +K + K T+ PN D +D +D PLSAR + S NKGA+T
Sbjct: 121 KQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARLKGI-SNQGNKGASTSAPA 179
Query: 792 QNSK-IPKSE 818
Q+ + +PK+E
Sbjct: 180 QSRRLVPKTE 189
>dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 104 bits (260), Expect = 3e-20
Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC M+D+++D+GP++FKR E KK QKH Q + R
Sbjct: 1 MAVEACTTTNLMEDMEDDEGPVIFKRSNPTSKQNQANAEKKKLSLQKHVGQSAVHTSDVR 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLN 629
P NG+++S QK + PS+ TPP +SPL PK SNS + S + S +S S S T
Sbjct: 61 PANGESSSAQKGRIQPSAETPPVKSPLSSPKASNSSAKASPITSPGANSKLSASATSTAK 120
Query: 630 SVKCQIKGENALNKFTSGP----NEDSEDSEDDKPLSARFSKVN----SGNANKGANTLN 785
+ S P N +SE S+D+KPL AR S + S +ANK
Sbjct: 121 QQNHHKSSAAFIEPKPSVPAAKANSNSESSDDEKPLIARTSGCSSMGKSNHANKEGGDSC 180
Query: 786 SGQNSKIPKSED 821
S + I +SED
Sbjct: 181 SIRRPVIEESED 192
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 97.4 bits (241), Expect = 6e-18
Identities = 78/207 (37%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAVEAC DD+DEDD PIVFKR ET+K QK Q R ++R
Sbjct: 1 MAVEACPTPNLRDDMDEDDEPIVFKRNNSASKQSQTNSETRKVSSQKRDGQSVRQIYDSR 60
Query: 450 PQNGQNNSVQKNKTGPSSR---------TPPD-----RSPLMKPKLSNSPTQGSVVKSTN 587
P NG+++S QK + P S+ +PP +SPL PK+S S + S V S
Sbjct: 61 PANGESSSGQKGRMVPPSKPSQVKSPLSSPPSKPSQVKSPLSSPKVSTSSAKKSPVSSLP 120
Query: 588 VDSIPSTSMTGGLNSVK--CQIKGENALNKFTSGP-------NEDSEDSEDDKPLSARFS 740
+S PSTS G VK Q K + + S P DSEDS+D KPLS R
Sbjct: 121 ANSKPSTS---GSFKVKPFNQHKSATVIKEEKSSPLRLASAIINDSEDSDDGKPLSLR-- 175
Query: 741 KVNSGNANKGANTLNSGQNSKIPKSED 821
+S +++KG S + SK P++ED
Sbjct: 176 --HSASSSKGNTNQVSKEGSK-PENED 199
>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 97.4 bits (241), Expect = 6e-18
Identities = 78/195 (40%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDG--PIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALN 443
MAVEA K K M ++D+DD P+VFKR S QK + GR A +
Sbjct: 1 MAVEAFSKTKLMAEVDDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQASD 55
Query: 444 ARPQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGG 623
R NGQ++S +K K G SS+ SP PK SP+ G + N S PS S
Sbjct: 56 VRSPNGQSSSAEKVKAGTSSKASRAVSPFTSPKA--SPSSGRTSPAPN--SRPSASAGNQ 111
Query: 624 LNSVKCQIK-----GENALNKFTSGPNEDSEDSEDDKPLSAR----FSKVNSGNANKGAN 776
V Q K + A+ S PN+++EDSEDDKPLSAR SK NS +ANK
Sbjct: 112 AKDVNQQSKIVPNEPKQAVEP-KSEPNDEAEDSEDDKPLSARLSSGLSKSNSSHANKVLG 170
Query: 777 TLNSGQNSKIPKSED 821
T S Q S+ PK ED
Sbjct: 171 TSASVQKSRPPKKED 185
>gb|EXC36325.1| DNA topoisomerase 1 [Morus notabilis]
Length = 908
Score = 92.8 bits (229), Expect = 1e-16
Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAV+A KQ DD DEDDGP++ KR E KK L Q+ Q GR +
Sbjct: 1 MAVQAPAKQSLFDDFDEDDGPLIVKRKNTASKPNQLSSELKKPLSQRLDGQSGRQISDGV 60
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSNSPTQGSVVK--------STNVDSIPS 605
NG N+ QK K SS+ P +SPL+ PK S S T+ + K ST +D P
Sbjct: 61 FLNGINSYSQKGKVVQSSKASPVKSPLVSPKASTSSTKAATQKSLVEIRRASTPLDGRPK 120
Query: 606 TSMTGGLNSVKCQIKGENALNK-FTSGPNEDSEDSEDDKPLSARFSKVNSGNANKGANTL 782
S G N + ++++ + TS + + DS+DDKPLSAR K NS +KG
Sbjct: 121 FS--SGQNKYSAVKEEKSSIRQSTTSDIHFEDSDSDDDKPLSARL-KGNSNQGDKGTGKS 177
Query: 783 NSG 791
+G
Sbjct: 178 TAG 180
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 92.8 bits (229), Expect = 1e-16
Identities = 71/193 (36%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNAR 449
MAV+AC K+K MD++DEDD P+VFKR +TKKS Q++ Q GR +
Sbjct: 1 MAVQACVKEKMMDEIDEDDEPLVFKRSNATSKHNQLNSDTKKS-SQRYDGQSGRQVSDVP 59
Query: 450 PQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLSN-----SPTQGSVVKSTNVDSIPSTSM 614
NGQ++S K KT ++ +SP+ PK S SP V S++ D +S
Sbjct: 60 STNGQSSSASKGKT---TKLSSMKSPIASPKASTSFAKASPVANPKVSSSSDDRSKHSSK 116
Query: 615 TGGLNSVKCQIKGENALNKFTSGPNEDSEDSEDDKPLSAR----FSKVNSGNANKGANTL 782
+N VK + + + E DSED+KPLSAR +K +S NANKG +
Sbjct: 117 QNTINVVKEE-------KELVNPAAEPYGDSEDEKPLSARLFTGLTKGSSNNANKG--LI 167
Query: 783 NSGQNS-KIPKSE 818
NS S +PK E
Sbjct: 168 NSSPASLPVPKPE 180
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 90.9 bits (224), Expect = 5e-16
Identities = 75/213 (35%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Frame = +3
Query: 270 MAVEACDKQKEMDDLDEDDG-PIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNA 446
MAVEA K M+D+D+DD P+VFKR S QK + GR +
Sbjct: 1 MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQ-----NQSNSSSQKQDGRSGRQVPDV 55
Query: 447 RPQNGQNNSVQKNKTGPSSRTPPDRSPLMKPKLS-----NSPT---QGSVVKSTNVDSIP 602
R NGQ++S K KT SS+ P SPL PK + SP + S ++ P
Sbjct: 56 RSPNGQSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAP 115
Query: 603 STSMTGGLNSVKCQIKGENALN----------------KFTSGPNEDSEDSEDDKPLSAR 734
++ + NS G A N + S PN+++EDSEDDKPLSAR
Sbjct: 116 NSRTSPAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSAR 175
Query: 735 ----FSKVNSGNANKGANTLNSGQNSKIPKSED 821
SK NS +AN T S Q S+ PK ED
Sbjct: 176 VPSGLSKSNSIHANNVLGTSTSVQKSRPPKKED 208
>emb|CAB46363.1| DNA topoisomerase I [Daucus carota]
Length = 909
Score = 74.3 bits (181), Expect = 5e-11
Identities = 57/182 (31%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Frame = +3
Query: 318 EDDGPIVFKRXXXXXXXXXXXXETKKSLPQKHGQQLGRPALNARPQNGQNNSVQKNKTGP 497
EDD P++FKR +K + + Q+GR + R NG +++VQK KT P
Sbjct: 8 EDDKPLIFKRSNTSVKQNQAKPRCQKIISAEAVWQVGRLISDVRSTNGHDSNVQKGKTVP 67
Query: 498 SSRTPPDRSPLMKPKLSNSPTQGSVVKSTNVDSIPSTSMTGGLNSVKCQ-----IKGENA 662
S++ P SPL PK S S ++ S VK + STS Q +K E
Sbjct: 68 STKGSPVVSPLASPKASVSSSKASQVKPPVASTKASTSGADQSRQNSQQNRTAIVKAERP 127
Query: 663 LNKFTSGPNEDSEDSEDDKPLSAR---------FSKVNSGNANKGANTLNSGQNSKIPKS 815
P+ SEDS+DDKPL++R S+VN ++ G K S
Sbjct: 128 SGIPKEEPDSGSEDSDDDKPLNSRLPVGGSKGSISEVNRRPSSSGPAAFEKDLGIKEEDS 187
Query: 816 ED 821
ED
Sbjct: 188 ED 189