BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00017253
         (606 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...   335   6e-90
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...   334   1e-89
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]   317   2e-84
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              317   2e-84
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   301   9e-80
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer...   299   5e-79
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   297   2e-78
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   293   3e-77
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   293   3e-77
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   289   4e-76
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   289   5e-76
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   286   3e-75
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer...   278   1e-72
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   278   1e-72
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   271   1e-70
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...   268   7e-70
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...   268   1e-69
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...   266   4e-69
gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase ...   264   2e-68
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...   262   6e-68

>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
           lycopersicum]
          Length = 1184

 Score =  335 bits (859), Expect = 6e-90
 Identities = 165/202 (81%), Positives = 178/202 (88%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS S LKLRIWF  PE+F PQKER S+ M DALYPFECRQAK+SYSGKF+VD+ FQYGDG
Sbjct: 61  DSFSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDG 120

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            ++REKF  GQ PIMLKSKLCHLR A+D KKLV  KEEPSEMGGYFIL GLERVIR +IL
Sbjct: 121 AVIREKFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIIL 180

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYPTSM RNSFRDRREGY+DKAV IRCVREDQSAV++KLYYL NGSARLGFWIQGRE
Sbjct: 181 PKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGRE 240

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGIILKAL +TTDHEIYV
Sbjct: 241 YLLPVGIILKALVDTTDHEIYV 262


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           [Solanum tuberosum]
          Length = 1179

 Score =  334 bits (856), Expect = 1e-89
 Identities = 163/202 (80%), Positives = 178/202 (88%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS S LKLRIWF  PE+F PQKER S+ M DALYPFECRQAKLSY+GKF+VD+ FQYGDG
Sbjct: 56  DSFSSLKLRIWFGKPELFPPQKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDG 115

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            ++REKF  GQ PIMLKSKLCHLR A+D +KL+  KEEPSEMGGYFIL GLERVIR +IL
Sbjct: 116 AVIREKFNFGQFPIMLKSKLCHLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIIL 175

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYPTSM RNSFRDRREGY+DKAV IRCVREDQSAV++KLYYL NGSARLGFWIQGRE
Sbjct: 176 PKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGRE 235

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGIILKAL +TTDHEIYV
Sbjct: 236 YLLPVGIILKALVDTTDHEIYV 257


>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
          Length = 416

 Score =  317 bits (812), Expect = 2e-84
 Identities = 155/195 (79%), Positives = 172/195 (88%), Gaps = 1/195 (0%)
 Frame = +2

Query: 20  KLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 196
           ++ +WF  PE++ PQKERS R M DALYPFECRQAK+SYSGK + D+ FQYG+GV++REK
Sbjct: 55  RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVVIREK 114

Query: 197 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 376
           F LGQ P+MLKSKLCHLR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP
Sbjct: 115 FNLGQFPMMLKSKLCHLRGA-DPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 173

Query: 377 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 556
            SMVRNSFRDRREGYTDKAV IRCVREDQSAVTVKLYYL NGSARLGFWIQGREYLLPVG
Sbjct: 174 MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 233

Query: 557 IILKALTETTDHEIY 601
           ++LKAL +TTDHEIY
Sbjct: 234 VVLKALIDTTDHEIY 248


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  317 bits (811), Expect = 2e-84
 Identities = 156/195 (80%), Positives = 171/195 (87%), Gaps = 1/195 (0%)
 Frame = +2

Query: 20  KLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREK 196
           ++ +WF  PE++ PQKERS R M DALYPFECRQAK+SYSGK + D+ FQYG+GV +REK
Sbjct: 16  RIALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREK 75

Query: 197 FCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYP 376
           F LGQ PIMLKSKLCHLR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP
Sbjct: 76  FNLGQFPIMLKSKLCHLRGA-DPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYP 134

Query: 377 TSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVG 556
            SMVRNSFRDRREGYTDKAV IRCVREDQSAVTVKLYYL NGSARLGFWIQGREYLLPVG
Sbjct: 135 MSMVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVG 194

Query: 557 IILKALTETTDHEIY 601
           ++LKAL +TTDHEIY
Sbjct: 195 VVLKALIDTTDHEIY 209


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
           sativus]
          Length = 1173

 Score =  301 bits (771), Expect = 9e-80
 Identities = 145/201 (72%), Positives = 168/201 (83%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS +  KLRIW   PE++ PQKER+ R + +AL P+ECRQAK+SY+GKFM D+ FQY + 
Sbjct: 47  DSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            ++REKF  GQ PIMLKSKLCHLR   DPKKLV   EE SEMGGYF++NGLERV+R LI 
Sbjct: 107 AVIREKFNFGQFPIMLKSKLCHLRGL-DPKKLVSYNEEASEMGGYFVMNGLERVVRLLIA 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYPTSMVRNSF DRREGYTDKAV IRCVREDQS+VTVKLYYL NGSARLGFW+QG+E
Sbjct: 166 PKRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKE 225

Query: 539 YLLPVGIILKALTETTDHEIY 601
           YLLP+G++LKAL +TTDHEIY
Sbjct: 226 YLLPIGVVLKALIDTTDHEIY 246


>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
           RPA2-like, partial [Cucumis sativus]
          Length = 948

 Score =  299 bits (765), Expect = 5e-79
 Identities = 144/201 (71%), Positives = 167/201 (83%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS +  KLRIW   PE++ PQKER+ R + +AL P+ECRQAK+SY+GKFM D+ FQY + 
Sbjct: 47  DSFTNKKLRIWLGKPELYPPQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            ++REK   GQ PIMLKSKLCHLR   DPKKLV   EE SEMGGYF++NGLERV+R LI 
Sbjct: 107 AVIREKLNFGQFPIMLKSKLCHLRGL-DPKKLVSYNEEASEMGGYFVMNGLERVVRLLIA 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYPTSMVRNSF DRREGYTDKAV IRCVREDQS+VTVKLYYL NGSARLGFW+QG+E
Sbjct: 166 PKRNYPTSMVRNSFSDRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKE 225

Query: 539 YLLPVGIILKALTETTDHEIY 601
           YLLP+G++LKAL +TTDHEIY
Sbjct: 226 YLLPIGVVLKALIDTTDHEIY 246


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
           vinifera]
          Length = 1142

 Score =  297 bits (760), Expect = 2e-78
 Identities = 147/184 (79%), Positives = 160/184 (86%)
 Frame = +2

Query: 50  IFSPQKERSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFCLGQLPIMLK 229
           + S +   +R M DALYPFECRQAK+SYSGK + D+ FQYG+GV +REKF LGQ PIMLK
Sbjct: 34  LMSVKPRSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLK 93

Query: 230 SKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVRNSFRDR 409
           SKLCHLR A DP+KLV  KEE SEMGGYFILNGLERV+R LILPK NYP SMVRNSFRDR
Sbjct: 94  SKLCHLRGA-DPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDR 152

Query: 410 REGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKALTETTD 589
           REGYTDKAV IRCVREDQSAVTVKLYYL NGSARLGFWIQGREYLLPVG++LKAL +TTD
Sbjct: 153 REGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTD 212

Query: 590 HEIY 601
           HEIY
Sbjct: 213 HEIY 216


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Glycine max]
          Length = 1151

 Score =  293 bits (750), Expect = 3e-77
 Identities = 147/202 (72%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           D  +  KLRIW  NP ++ PQKER SR M +AL PFECRQAK+SYSGK  +D+ FQY DG
Sbjct: 47  DDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDG 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            I+RE    GQ PIML+SKLC+LR A DP+KLV  KEE SEMGGYFILNGLERV+R LIL
Sbjct: 107 PIIRENVNFGQFPIMLQSKLCNLRGA-DPQKLVSYKEEASEMGGYFILNGLERVVRLLIL 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYP SMVRNSF DRREGYTDKAV IRCVR DQS+++V+LYYL NGSARLGFW++GRE
Sbjct: 166 PKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGRE 225

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGIILKAL +TTD EIYV
Sbjct: 226 YLLPVGIILKALIDTTDREIYV 247


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
           X1 [Glycine max]
          Length = 1175

 Score =  293 bits (750), Expect = 3e-77
 Identities = 147/202 (72%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           D  +  KLRIW  NP ++ PQKER SR M +AL PFECRQAK+SYSGK  +D+ FQY DG
Sbjct: 47  DDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDG 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            I+RE    GQ PIML+SKLC+LR A DP+KLV  KEE SEMGGYFILNGLERV+R LIL
Sbjct: 107 PIIRENVNFGQFPIMLQSKLCNLRGA-DPQKLVSYKEEASEMGGYFILNGLERVVRLLIL 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYP SMVRNSF DRREGYTDKAV IRCVR DQS+++V+LYYL NGSARLGFW++GRE
Sbjct: 166 PKRNYPMSMVRNSFSDRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGRE 225

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGIILKAL +TTD EIYV
Sbjct: 226 YLLPVGIILKALIDTTDREIYV 247


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Glycine max]
          Length = 1175

 Score =  289 bits (740), Expect = 4e-76
 Identities = 144/202 (71%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           D  +  KLRIW  NP ++ PQKER SR M +AL PFECRQAK+SY+GK  +D+ FQY DG
Sbjct: 47  DDFTSTKLRIWLDNPVLYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDG 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            I+RE    GQ PIML+SKLC+LR A DP+KLV  +EE SEMGGYFILNGLERVIR LIL
Sbjct: 107 PIIRENINFGQFPIMLQSKLCNLRGA-DPQKLVSYREEASEMGGYFILNGLERVIRLLIL 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK N+P SMVRNSF DRREGYTDKA+ IRCVR DQS+++V+LYYL NGSARLGFW++GRE
Sbjct: 166 PKRNHPMSMVRNSFSDRREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGRE 225

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGIILKAL +TTD EIYV
Sbjct: 226 YLLPVGIILKALIDTTDREIYV 247


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
           gi|561006696|gb|ESW05690.1| hypothetical protein
           PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  289 bits (739), Expect = 5e-76
 Identities = 143/202 (70%), Positives = 166/202 (82%), Gaps = 1/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           D  +  KLRIW  NP ++ PQKER S+ M +AL PFECRQAK+SY+GK  +D+ FQY DG
Sbjct: 47  DDFTTTKLRIWLENPVVYPPQKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDG 106

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
            ++RE    GQ PIML+SKLC+LR A DPKKLV  KEE SEMGGYFILNGLERVIR LIL
Sbjct: 107 PVIRENVNFGQFPIMLQSKLCNLRGA-DPKKLVSCKEEASEMGGYFILNGLERVIRLLIL 165

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYP SMVR+SF DRREGYTDKAV IRCVR DQS+++++LYYL NGSARLGFW++GRE
Sbjct: 166 PKRNYPMSMVRSSFCDRREGYTDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGRE 225

Query: 539 YLLPVGIILKALTETTDHEIYV 604
           YLLPVGI+LKAL +TTD EIYV
Sbjct: 226 YLLPVGIVLKALIDTTDREIYV 247


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
           gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
           isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  286 bits (732), Expect = 3e-75
 Identities = 143/201 (71%), Positives = 163/201 (81%), Gaps = 1/201 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKERS-RNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS S   LRIW  +PE++ PQK+RS +    ALYPFECRQAK+SY+G F +D+ FQ+  G
Sbjct: 54  DSSSNKTLRIWLDHPEVYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGG 113

Query: 179 VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLIL 358
           V+VREK   G+ PIMLKSK C+LR A DP+KLV  KEE  EMGGYFILNGLERV+R LIL
Sbjct: 114 VVVREKLNFGEFPIMLKSKRCYLREA-DPRKLVACKEESREMGGYFILNGLERVVRLLIL 172

Query: 359 PKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGRE 538
           PK NYP S+VRNSFRDRREGYTDKAV IRCVR D S+VTVKLYYL NGSARLGFW+QGRE
Sbjct: 173 PKRNYPMSLVRNSFRDRREGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGRE 232

Query: 539 YLLPVGIILKALTETTDHEIY 601
           Y+LPVGIILKAL +T D EIY
Sbjct: 233 YMLPVGIILKALIDTNDREIY 253


>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X2 [Citrus sinensis]
          Length = 954

 Score =  278 bits (710), Expect = 1e-72
 Identities = 139/203 (68%), Positives = 167/203 (82%), Gaps = 3/203 (1%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS +  +L+I   NPEIF PQKE+ S+ + DAL PFECRQAK+SY+GK M D+ FQY D 
Sbjct: 45  DSFTNKRLKISVGNPEIFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDA 104

Query: 179 --VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSL 352
              +VRE+F  GQ P+MLK++ CHL+ A D +KLV LKEE +EMGGYFILNGLERV RS+
Sbjct: 105 GSPVVRERFNFGQFPVMLKTRRCHLQGA-DSQKLVSLKEEAAEMGGYFILNGLERVFRSV 163

Query: 353 ILPKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQG 532
           ILPK NYP SMVR+SFRDRREGYTDKAV IRCVR+DQS+VT+KLYYL+NGS RLGFW+QG
Sbjct: 164 ILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQG 223

Query: 533 REYLLPVGIILKALTETTDHEIY 601
           +EYLLPVGI+LKAL +T D EI+
Sbjct: 224 KEYLLPVGIVLKALVDTNDLEIF 246


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  278 bits (710), Expect = 1e-72
 Identities = 139/203 (68%), Positives = 167/203 (82%), Gaps = 3/203 (1%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKER-SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDG 178
           DS +  +L+I   NPEIF PQKE+ S+ + DAL PFECRQAK+SY+GK M D+ FQY D 
Sbjct: 45  DSFTNKRLKISVGNPEIFPPQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDA 104

Query: 179 --VIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSL 352
              +VRE+F  GQ P+MLK++ CHL+ A D +KLV LKEE +EMGGYFILNGLERV RS+
Sbjct: 105 GSPVVRERFNFGQFPVMLKTRRCHLQGA-DSQKLVSLKEEAAEMGGYFILNGLERVFRSV 163

Query: 353 ILPKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQG 532
           ILPK NYP SMVR+SFRDRREGYTDKAV IRCVR+DQS+VT+KLYYL+NGS RLGFW+QG
Sbjct: 164 ILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQG 223

Query: 533 REYLLPVGIILKALTETTDHEIY 601
           +EYLLPVGI+LKAL +T D EI+
Sbjct: 224 KEYLLPVGIVLKALVDTNDLEIF 246


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
           isoform X1 [Cicer arietinum]
           gi|502078798|ref|XP_004486058.1| PREDICTED: probable
           DNA-directed RNA polymerase I subunit RPA2-like isoform
           X2 [Cicer arietinum]
          Length = 1177

 Score =  271 bits (692), Expect = 1e-70
 Identities = 139/198 (70%), Positives = 162/198 (81%), Gaps = 4/198 (2%)
 Frame = +2

Query: 23  LRIWFTNPEIFSPQKER----SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVR 190
           L+I   NP+IF PQKER    SRN+   LYPFECRQAK+SY+G F  ++ FQY +G IVR
Sbjct: 60  LKISMDNPKIFEPQKERGFSKSRNI---LYPFECRQAKISYTGTFTAELCFQYDNGPIVR 116

Query: 191 EKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGN 370
           EKF  GQ PIML+SKLC+LR A+ PKKLV  KEE SE+GGYFILNGLERV+R LI+PK N
Sbjct: 117 EKFNFGQFPIMLQSKLCNLRGAS-PKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRN 175

Query: 371 YPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLP 550
           YP S VR+SF +RREGYTDKAV IRCVR DQ++V++KLYYL NGSARLGFWI GREY+LP
Sbjct: 176 YPMSTVRSSFSERREGYTDKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLP 235

Query: 551 VGIILKALTETTDHEIYV 604
           VGI+LKAL +TTD EIYV
Sbjct: 236 VGIVLKALIDTTDREIYV 253


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
           lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
           ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score =  268 bits (686), Expect = 7e-70
 Identities = 131/193 (67%), Positives = 156/193 (80%), Gaps = 2/193 (1%)
 Frame = +2

Query: 29  IWFTNPEIFSPQKE--RSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFC 202
           +W  NP +F+PQKE  RS +  + L PFECRQAK+SY+G FM D+ F+Y DGV+VR++F 
Sbjct: 68  LWLENPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFD 127

Query: 203 LGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTS 382
            GQ PIML SKLC LR A D +KL+  KE  SEMGGYFILNG+ERV R +I PK N+PTS
Sbjct: 128 FGQFPIMLMSKLCSLRGA-DCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTS 186

Query: 383 MVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGII 562
           M+RNSFRDR+EGYT+KAV  RCVR+DQS+VTVKLYYL NGSAR+GFWI GREYLLPVG++
Sbjct: 187 MIRNSFRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLV 246

Query: 563 LKALTETTDHEIY 601
           LKALT T D EIY
Sbjct: 247 LKALTNTCDEEIY 259


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
           gi|482575323|gb|EOA39510.1| hypothetical protein
           CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score =  268 bits (684), Expect = 1e-69
 Identities = 130/190 (68%), Positives = 157/190 (82%), Gaps = 2/190 (1%)
 Frame = +2

Query: 38  TNPEIFSPQKER--SRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGVIVREKFCLGQ 211
           TNP +F+PQKE   S +  + L+PFECRQAK+SY+G FM D+ F+Y +GV+VR+KF  GQ
Sbjct: 49  TNPVVFAPQKESFSSTSRKEPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFDFGQ 108

Query: 212 LPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILPKGNYPTSMVR 391
            PIML SKLC LR A D +KL+  KE  SEMGGYF+LNG+ERV R +I PK N+PTSM+R
Sbjct: 109 FPIMLMSKLCSLRGA-DCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIR 167

Query: 392 NSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREYLLPVGIILKA 571
           NSFRDRREGY+DKAV IRCVR+DQS+VTVKLYYL NGSAR+GFWI GREYLLPVG++LKA
Sbjct: 168 NSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKA 227

Query: 572 LTETTDHEIY 601
           LT+T D E+Y
Sbjct: 228 LTKTNDEEVY 237


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
           gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
           [Arabidopsis thaliana]
          Length = 1178

 Score =  266 bits (679), Expect = 4e-69
 Identities = 131/202 (64%), Positives = 160/202 (79%), Gaps = 2/202 (0%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKE--RSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGD 175
           D  ++ +L IW  NP +F+PQKE  +S +  + L PFECRQAK+SY+G FM D+ F+Y D
Sbjct: 52  DPNTENELSIWLENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYND 111

Query: 176 GVIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLI 355
           GV+VR+KF  GQ PIML SKLC L+ A D +KL+  KE  SEMGGYFILNG+ERV R +I
Sbjct: 112 GVVVRDKFDFGQFPIMLMSKLCSLKGA-DCRKLLKCKESTSEMGGYFILNGIERVFRCVI 170

Query: 356 LPKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGR 535
            PK N+PTSM+RNSFRDR+EGY+ KAV  RCVR+DQS+VTVKLYYL NGSAR+GFWI GR
Sbjct: 171 APKRNHPTSMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGR 230

Query: 536 EYLLPVGIILKALTETTDHEIY 601
           EYLLPVG++LKALT + D EIY
Sbjct: 231 EYLLPVGLVLKALTNSCDEEIY 252


>gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase subunit [Arabidopsis
           thaliana]
          Length = 1233

 Score =  264 bits (674), Expect = 2e-68
 Identities = 129/200 (64%), Positives = 158/200 (79%), Gaps = 2/200 (1%)
 Frame = +2

Query: 8   LSKLKLRIWFTNPEIFSPQKE--RSRNMGDALYPFECRQAKLSYSGKFMVDMNFQYGDGV 181
           +S   + +W  NP +F+PQKE  +S +  + L PFECRQAK+SY+G FM D+ F+Y DGV
Sbjct: 86  ISLTSMILWLENPLVFAPQKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGV 145

Query: 182 IVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLERVIRSLILP 361
           +VR+KF  GQ PIML SKLC L+ A D +KL+  KE  SEMGGYFILNG+ERV R +I P
Sbjct: 146 VVRDKFDFGQFPIMLMSKLCSLKGA-DCRKLLKCKESTSEMGGYFILNGIERVFRCVIAP 204

Query: 362 KGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLGFWIQGREY 541
           K N+PTSM+RNSFRDR+EGY+ KAV  RCVR+DQS+VTVKLYYL NGSAR+GFWI GREY
Sbjct: 205 KRNHPTSMIRNSFRDRKEGYSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREY 264

Query: 542 LLPVGIILKALTETTDHEIY 601
           LLPVG++LKALT + D EIY
Sbjct: 265 LLPVGLVLKALTNSCDEEIY 284


>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus
           notabilis]
          Length = 1243

 Score =  262 bits (669), Expect = 6e-68
 Identities = 137/208 (65%), Positives = 160/208 (76%), Gaps = 8/208 (3%)
 Frame = +2

Query: 2   DSLSKLKLRIWFTNPEIFSPQKERSRNMGDA--------LYPFECRQAKLSYSGKFMVDM 157
           DSL +L+        E+F  Q E   ++ DA        + P +CRQAK+SY+GKFM D 
Sbjct: 9   DSLEELR--------ELFRHQIESFDHLIDAGLETLLLGIKPIQCRQAKISYTGKFMADG 60

Query: 158 NFQYGDGVIVREKFCLGQLPIMLKSKLCHLRAANDPKKLVMLKEEPSEMGGYFILNGLER 337
            FQY +G ++REKF  GQ PIMLKSKLC+L  A DP+KLV  KEE SEMGGYFILNGLER
Sbjct: 61  CFQYDNGAVIREKFNFGQFPIMLKSKLCNLSGA-DPQKLVASKEEDSEMGGYFILNGLER 119

Query: 338 VIRSLILPKGNYPTSMVRNSFRDRREGYTDKAVTIRCVREDQSAVTVKLYYLINGSARLG 517
           V+R LILPK NYP SMVRNSFRDRR+GYTDKAV IRCVREDQS+V+V++YYL NGSARLG
Sbjct: 120 VVRLLILPKRNYPMSMVRNSFRDRRQGYTDKAVGIRCVREDQSSVSVRVYYLRNGSARLG 179

Query: 518 FWIQGREYLLPVGIILKALTETTDHEIY 601
           FW+ GREYLLPVGI+LKAL +TTD EIY
Sbjct: 180 FWVHGREYLLPVGIVLKALVDTTDREIY 207