BLASTX nr result

ID: Mentha26_contig00017088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00017088
         (341 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356384.1| PREDICTED: zinc finger CCCH domain-containin...    59   7e-07
ref|XP_006356383.1| PREDICTED: zinc finger CCCH domain-containin...    59   7e-07
ref|XP_006356382.1| PREDICTED: zinc finger CCCH domain-containin...    59   7e-07
ref|XP_004251337.1| PREDICTED: zinc finger CCCH domain-containin...    59   7e-07
gb|EYU37854.1| hypothetical protein MIMGU_mgv1a000112mg [Mimulus...    56   6e-06

>ref|XP_006356384.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like isoform
            X3 [Solanum tuberosum]
          Length = 1703

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9    SGSFLNPGPV---QPDVWRPPAQSTQQNMHSPTTPNASWGVGPAVESNTTTMAVRPQNPN 179
            +G+F N G     QPD W  PAQ +QQ +   T P+  WG G   E+ ++  A+RP+N N
Sbjct: 1454 AGNFSNAGASVMPQPDYWSTPAQGSQQIIQPTTVPSVPWGAG-LQENASSASALRPEN-N 1511

Query: 180  AVWGPMQGTPNMG 218
              WG M G PN+G
Sbjct: 1512 TGWGMMPGNPNVG 1524


>ref|XP_006356383.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like isoform
            X2 [Solanum tuberosum]
          Length = 1732

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9    SGSFLNPGPV---QPDVWRPPAQSTQQNMHSPTTPNASWGVGPAVESNTTTMAVRPQNPN 179
            +G+F N G     QPD W  PAQ +QQ +   T P+  WG G   E+ ++  A+RP+N N
Sbjct: 1483 AGNFSNAGASVMPQPDYWSTPAQGSQQIIQPTTVPSVPWGAG-LQENASSASALRPEN-N 1540

Query: 180  AVWGPMQGTPNMG 218
              WG M G PN+G
Sbjct: 1541 TGWGMMPGNPNVG 1553


>ref|XP_006356382.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like isoform
            X1 [Solanum tuberosum]
          Length = 1737

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9    SGSFLNPGPV---QPDVWRPPAQSTQQNMHSPTTPNASWGVGPAVESNTTTMAVRPQNPN 179
            +G+F N G     QPD W  PAQ +QQ +   T P+  WG G   E+ ++  A+RP+N N
Sbjct: 1488 AGNFSNAGASVMPQPDYWSTPAQGSQQIIQPTTVPSVPWGAG-LQENASSASALRPEN-N 1545

Query: 180  AVWGPMQGTPNMG 218
              WG M G PN+G
Sbjct: 1546 TGWGMMPGNPNVG 1558


>ref|XP_004251337.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Solanum lycopersicum]
          Length = 1397

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9    SGSFLNPGPV---QPDVWRPPAQSTQQNMHSPTTPNASWGVGPAVESNTTTMAVRPQNPN 179
            +G+F N G     QPD W  PAQ +QQ +   T P+  WG G   E+ ++  A+RP+N N
Sbjct: 1148 AGNFSNAGASVLPQPDYWSTPAQGSQQIIQPTTVPSVPWGAG-LQENASSASALRPEN-N 1205

Query: 180  AVWGPMQGTPNMG 218
              WG M G PN+G
Sbjct: 1206 TGWGMMPGNPNVG 1218


>gb|EYU37854.1| hypothetical protein MIMGU_mgv1a000112mg [Mimulus guttatus]
          Length = 1754

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/86 (43%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
 Frame = +3

Query: 9    SGSFLNPGP---VQPDVWRP----------PAQSTQQNMHSPTTPNASWGVGPAVESNTT 149
            SGSF N G    +Q D+WRP          P Q +  NM  PTTPNAS G          
Sbjct: 1525 SGSFQNSGSTVGIQQDMWRPTQGSVPNMIPPTQGSVPNMIPPTTPNASIG---------- 1574

Query: 150  TMAVRPQNPNAVWG---PMQGTPNMG 218
               VRP+NPN  WG    MQ  PNMG
Sbjct: 1575 ---VRPENPNMGWGGTNTMQANPNMG 1597


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