BLASTX nr result
ID: Mentha26_contig00016853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha26_contig00016853
(1944 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 432 e-118
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 393 e-106
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 377 e-101
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 377 e-101
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 377 e-101
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 376 e-101
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 370 e-100
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 365 5e-98
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 365 5e-98
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 363 2e-97
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 362 3e-97
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 360 1e-96
emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera] 360 1e-96
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 353 1e-94
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 350 1e-93
emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] 347 1e-92
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 343 1e-91
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 343 2e-91
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 342 4e-91
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 340 1e-90
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 432 bits (1111), Expect = e-118
Identities = 207/288 (71%), Positives = 241/288 (83%), Gaps = 3/288 (1%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA + +LFFKE+VRLHG+PR+I+SDRD+KFLS+F FST
Sbjct: 223 HFIPCHKTDDATSIANLFFKEIVRLHGVPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFST 282
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLSTLLRAII+KN+K+WEECLPHVEFAYNR+VHSAT+FSPFEIVY
Sbjct: 283 TCHPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVY 342
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNPLTPLDL PLP + ++DG+KK +FVKQ+HE+ R +IE+RTEQYA QANKGR++VV
Sbjct: 343 GFNPLTPLDLLPLPIDERASMDGKKKAEFVKQLHERTRQHIEKRTEQYATQANKGRKQVV 402
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
F+PGDWVWVHMRKERFP QRRSKLLPRGDGPFQV+ RINDNAYKLDLPGEYNV TFNV+
Sbjct: 403 FQPGDWVWVHMRKERFPAQRRSKLLPRGDGPFQVVARINDNAYKLDLPGEYNVIATFNVS 462
Query: 723 DLSPFDVGDDLDLRTNPLQEEGND-GVQGSL--IQDPVRVPSGPVTRA 857
DLSPFDVG+ D RTNP +E GND QG++ DP+ + GP+TRA
Sbjct: 463 DLSPFDVGE--DSRTNPFEERGNDENHQGTIKTSSDPLHIHGGPITRA 508
>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
Length = 1173
Score = 393 bits (1010), Expect = e-106
Identities = 195/305 (63%), Positives = 229/305 (75%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFI CHK DDA H+ +LFF+++VRLHG+PR+I+SDRD KFLS F FST
Sbjct: 889 HFISCHKTDDATHIANLFFRKIVRLHGIPRSIVSDRDVKFLSCFWKVLWGKLGTKLLFST 948
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQ EVVNRTLSTLLR II+KN+K+WE+CLP EFAYNRSVHS T FSPFEIVY
Sbjct: 949 TCHPQTDGQIEVVNRTLSTLLRTIIQKNLKNWEDCLPFTEFAYNRSVHSTTSFSPFEIVY 1008
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNPLTPLDL PLP ++ T+LD E++ EQY +ANKGRR+V+
Sbjct: 1009 GFNPLTPLDLLPLPVNEMTSLD-------------------EKKNEQYVTKANKGRRQVL 1049
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FE GDWVWVHMRKERFP +R+SKL PRGDGPFQVLERINDNAYKLDL GEYN+S TF V+
Sbjct: 1050 FESGDWVWVHMRKERFPTRRQSKLHPRGDGPFQVLERINDNAYKLDLLGEYNISATFKVS 1109
Query: 723 DLSPFDVGDDLDLRTNPLQEEGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHGLIQE 902
DLSPF+VGD D RTNP +E GND Q +DP+ V P+T+AR+KK KEAL+GLIQE
Sbjct: 1110 DLSPFNVGD--DSRTNPFEERGNDENQ-QAFKDPLHVLVEPITKARSKKIKEALNGLIQE 1166
Query: 903 VWAQA 917
+W +
Sbjct: 1167 IWVDS 1171
>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
Length = 1096
Score = 377 bits (968), Expect = e-101
Identities = 189/337 (56%), Positives = 244/337 (72%), Gaps = 6/337 (1%)
Frame = +3
Query: 6 FIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFSTI 185
FIPC K +DA HV DLF KEVV+LHG+PRTI+SDRD+KFLS+F FST
Sbjct: 759 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 818
Query: 186 CHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVYG 365
CHP TDGQTEVVNRTL +LRAI+K + SWE+ LP VEFAYNR+ HS+T +PFE+VYG
Sbjct: 819 CHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYG 878
Query: 366 FNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVVF 545
FNPLTPLDL PLP + NLDG+KK D +K+IHE+ RL IE++ ++ A + NKGR+ V+F
Sbjct: 879 FNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIF 938
Query: 546 EPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVTD 725
+PGD VWVHMRKERFP +R++KL PRG GP++VLERI DNAYKLDLPGE+ VS TFNV+D
Sbjct: 939 KPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSD 998
Query: 726 LSPFDVGDDLDLRTNPLQEEGNDGVQGSLI-----QDPVRVPSGPVTRARAKKFKEALHG 890
LS +D DLD RTN LQEEGND +QGS D + P P+TR++ K+F + L+G
Sbjct: 999 LSHYDA--DLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNG 1056
Query: 891 LIQEVWAQALMKKPIGEGGPDNTRVIN-LIECVRAED 998
L + + ++ + G + ++ N L+ ++A+D
Sbjct: 1057 LQSLIQRFLIGEEELKPKGEELSKCYNYLVAQIQAQD 1093
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 377 bits (968), Expect = e-101
Identities = 189/337 (56%), Positives = 244/337 (72%), Gaps = 6/337 (1%)
Frame = +3
Query: 6 FIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFSTI 185
FIPC K +DA HV DLF KEVV+LHG+PRTI+SDRD+KFLS+F FST
Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310
Query: 186 CHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVYG 365
CHP TDGQTEVVNRTL +LRAI+K + SWE+ LP VEFAYNR+ HS+T +PFE+VYG
Sbjct: 1311 CHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYG 1370
Query: 366 FNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVVF 545
FNPLTPLDL PLP + NLDG+KK D +K+IHE+ RL IE++ ++ A + NKGR+ V+F
Sbjct: 1371 FNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIF 1430
Query: 546 EPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVTD 725
+PGD VWVHMRKERFP +R++KL PRG GP++VLERI DNAYKLDLPGE+ VS TFNV+D
Sbjct: 1431 KPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSD 1490
Query: 726 LSPFDVGDDLDLRTNPLQEEGNDGVQGSLI-----QDPVRVPSGPVTRARAKKFKEALHG 890
LS +D DLD RTN LQEEGND +QGS D + P P+TR++ K+F + L+G
Sbjct: 1491 LSHYDA--DLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNG 1548
Query: 891 LIQEVWAQALMKKPIGEGGPDNTRVIN-LIECVRAED 998
L + + ++ + G + ++ N L+ ++A+D
Sbjct: 1549 LQSLIQRFLIGEEELKPKGEELSKCYNYLVAQIQAQD 1585
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 377 bits (968), Expect = e-101
Identities = 189/337 (56%), Positives = 244/337 (72%), Gaps = 6/337 (1%)
Frame = +3
Query: 6 FIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFSTI 185
FIPC K +DA HV DLF KEVV+LHG+PRTI+SDRD+KFLS+F FST
Sbjct: 1251 FIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTS 1310
Query: 186 CHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVYG 365
CHP TDGQTEVVNRTL +LRAI+K + SWE+ LP VEFAYNR+ HS+T +PFE+VYG
Sbjct: 1311 CHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYG 1370
Query: 366 FNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVVF 545
FNPLTPLDL PLP + NLDG+KK D +K+IHE+ RL IE++ ++ A + NKGR+ V+F
Sbjct: 1371 FNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIF 1430
Query: 546 EPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVTD 725
+PGD VWVHMRKERFP +R++KL PRG GP++VLERI DNAYKLDLPGE+ VS TFNV+D
Sbjct: 1431 KPGDLVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSD 1490
Query: 726 LSPFDVGDDLDLRTNPLQEEGNDGVQGSLI-----QDPVRVPSGPVTRARAKKFKEALHG 890
LS +D DLD RTN LQEEGND +QGS D + P P+TR++ K+F + L+G
Sbjct: 1491 LSHYDA--DLDSRTNSLQEEGNDSIQGSSTPLKDKDDALETPRRPITRSQTKEFNDKLNG 1548
Query: 891 LIQEVWAQALMKKPIGEGGPDNTRVIN-LIECVRAED 998
L + + ++ + G + ++ N L+ ++A+D
Sbjct: 1549 LQSLIQRFLIGEEELKPKGEELSKCYNYLVAQIQAQD 1585
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 376 bits (965), Expect = e-101
Identities = 177/270 (65%), Positives = 218/270 (80%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ +LFF+EVVRLHGMP+TI+SDRD+KFLSYF FST
Sbjct: 1488 HFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFST 1547
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLSTLLRA+IKKN+K+WE+CLPHVEFAYN S+HSA++FSPF+IVY
Sbjct: 1548 TCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVY 1607
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNP TPLDL PLP + +LDG+KK + V+QIHE+A+ NIE +T+QYAK ANK R++V+
Sbjct: 1608 GFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVI 1667
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
F GD VW+H+RKERFP +R+SKL+ R DGPF+VL+RIN+NAY LDL G+YNVS +FNV
Sbjct: 1668 FNEGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVA 1727
Query: 723 DLSPFDVGDDLDLRTNPLQEEGNDGVQGSL 812
DL PF + D+ DLR+NP Q +D + SL
Sbjct: 1728 DLFPF-IADNTDLRSNPFQLGEDDVIMTSL 1756
>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
Length = 1281
Score = 370 bits (951), Expect = e-100
Identities = 184/305 (60%), Positives = 220/305 (72%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
+FI CHK DDA H+ +LFF+E+VRLHG+PR+I+SDRD KFLSYF FST
Sbjct: 1003 YFISCHKIDDATHIANLFFREIVRLHGVPRSIVSDRDVKFLSYFWKVLWRKLGTKLLFST 1062
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLST VHS T FSPFEIVY
Sbjct: 1063 TCHPQTDGQTEVVNRTLSTF--------------------------VHSTTNFSPFEIVY 1096
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNPLT LDL PL ++ +LDG+KK + VK++HE R +IE++ EQY +ANKG +V+
Sbjct: 1097 GFNPLTSLDLLPLXVNEMXSLDGEKKVEMVKKLHESVRKHIEKKNEQYVSKANKGXXQVL 1156
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGDWVWVHMRKERFP +R SKL PRGDGPFQVLERINDNAYKLD+PGEYN+S TFNV+
Sbjct: 1157 FEPGDWVWVHMRKERFPTRRXSKLHPRGDGPFQVLERINDNAYKLDIPGEYNISATFNVS 1216
Query: 723 DLSPFDVGDDLDLRTNPLQEEGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHGLIQE 902
DLSPFDVGD D TNP +E+GND Q +DP+ V GP+T+AR+KK KEAL+GLIQE
Sbjct: 1217 DLSPFDVGD--DSXTNPFEEKGNDENQ-QAFKDPLHVLVGPITKARSKKIKEALNGLIQE 1273
Query: 903 VWAQA 917
+W ++
Sbjct: 1274 IWTKS 1278
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 365 bits (936), Expect = 5e-98
Identities = 176/310 (56%), Positives = 224/310 (72%), Gaps = 10/310 (3%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ LFF E+VRLHGMP+TI+SDRD+KFLSYF FST
Sbjct: 1300 HFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFST 1359
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLS LLRA+IKKN+K WEECLPHVEFAYNR+VHS T PFE+VY
Sbjct: 1360 TCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVY 1419
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GF PL+P+DL PLP + ++++ K+ +VK+IHEK + IE+R++ YA ANK R+KV
Sbjct: 1420 GFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVT 1479
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VWVH+RK+RFP +R+SKL+PRGDGPF+VL +INDNAYK++LP +Y VS TFNV
Sbjct: 1480 FEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVA 1539
Query: 723 DLSP-FDVGDDLDLRTNPLQE-EGNDGVQGSLIQDPVRVPS--------GPVTRARAKKF 872
DL+P F + D R+ P QE E ++ + + PS GP+TR+RAKK
Sbjct: 1540 DLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQGPLTRSRAKKL 1599
Query: 873 KEALHGLIQE 902
+ ++ + +
Sbjct: 1600 QVQVNSFLTD 1609
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 365 bits (936), Expect = 5e-98
Identities = 176/310 (56%), Positives = 224/310 (72%), Gaps = 10/310 (3%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ LFF E+VRLHGMP+TI+SDRD+KFLSYF FST
Sbjct: 268 HFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFST 327
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLS LLRA+IKKN+K WEECLPHVEFAYNR+VHS T PFE+VY
Sbjct: 328 TCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVY 387
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GF PL+P+DL PLP + ++++ K+ +VK+IHEK + IE+R++ YA ANK R+KV
Sbjct: 388 GFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVT 447
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VWVH+RK+RFP +R+SKL+PRGDGPF+VL +INDNAYK++LP +Y VS TFNV
Sbjct: 448 FEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVA 507
Query: 723 DLSP-FDVGDDLDLRTNPLQE-EGNDGVQGSLIQDPVRVPS--------GPVTRARAKKF 872
DL+P F + D R+ P QE E ++ + + PS GP+TR+RAKK
Sbjct: 508 DLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQGPLTRSRAKKL 567
Query: 873 KEALHGLIQE 902
+ ++ + +
Sbjct: 568 QVQVNSFLTD 577
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 363 bits (931), Expect = 2e-97
Identities = 176/310 (56%), Positives = 222/310 (71%), Gaps = 10/310 (3%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ LFF E+VRLHGMP+TI+SDRD+KFLSYF FST
Sbjct: 268 HFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFST 327
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLS LLRA+IKKN+K WEECLPHVEFAYNR+VHS T PFE+VY
Sbjct: 328 TCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVY 387
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GF PL P+DL PLP + ++++ K +VK+IHEK + IE+R++ YA ANK R+KV
Sbjct: 388 GFKPLAPIDLLPLPLQERSDMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVT 447
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VWVH+RK+RFP +R+SKL+PRGDGPF+VL +INDNAYK++LP +Y VS TFNV
Sbjct: 448 FEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNVA 507
Query: 723 DLSP-FDVGDDLDLRTNPLQE-EGNDGVQGSLIQDPVRVPS--------GPVTRARAKKF 872
DL+P F + D R+ P QE E ++ + + PS GP+TR+RAKK
Sbjct: 508 DLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSSTKQPSSNTKDTIQGPLTRSRAKKL 567
Query: 873 KEALHGLIQE 902
+ ++ + +
Sbjct: 568 QVQVNSFLTD 577
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 362 bits (930), Expect = 3e-97
Identities = 172/288 (59%), Positives = 215/288 (74%)
Frame = +3
Query: 48 DLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFSTICHP*TDGQTEVVNR 227
DLFFKEVVRLHG+PRTI+SDRD+KFLS+F +ST CHP TDGQTEVVNR
Sbjct: 1035 DLFFKEVVRLHGIPRTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNR 1094
Query: 228 TLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVYGFNPLTPLDLSPLPE 407
TL+ LLR +I+KN+KSWEE LP+VEFAYNR++HS T SPFE+ YGFNPLTPLDL PL
Sbjct: 1095 TLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHV 1154
Query: 408 HQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVVFEPGDWVWVHMRKER 587
+ +D KK +++ H K R IE++ EQYA++ANKGR+ ++F+PGDWVW+H K R
Sbjct: 1155 NDKECVDAAKKAQGIREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNR 1214
Query: 588 FPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVTDLSPFDVGDDLDLRT 767
FP QR+SKL+PRGDGPFQVLERINDNAYKLDL GE++VS TFNV DL+PFD D T
Sbjct: 1215 FPNQRKSKLMPRGDGPFQVLERINDNAYKLDLRGEHSVSSTFNVADLAPFDFSDS---GT 1271
Query: 768 NPLQEEGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHGLIQEVWA 911
N QE +D I DP++V SGPVTR++++K +EA + +Q W+
Sbjct: 1272 NLFQEGEDDETGMQQINDPLKVSSGPVTRSKSRKIQEAFNTFVQTDWS 1319
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 360 bits (925), Expect = 1e-96
Identities = 168/247 (68%), Positives = 197/247 (79%), Gaps = 1/247 (0%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPC K DDA HV DLFFKE+VRLHG+PR+I+SDRD+KFLS+F FST
Sbjct: 353 HFIPCKKVDDACHVADLFFKEIVRLHGLPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFST 412
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVN+TL TLLR ++KKN+KSWE CLPHVEFAYNR+VHS T SPFEIVY
Sbjct: 413 TCHPQTDGQTEVVNKTLGTLLRTVLKKNLKSWEACLPHVEFAYNRTVHSTTNCSPFEIVY 472
Query: 363 GFNPLTPLDLSPLPE-HQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKV 539
GFNPLTPLDL P+P + D Q K ++VK++HE+ + IE++ YA+QANK R+KV
Sbjct: 473 GFNPLTPLDLLPMPNITMFKHKDAQAKAEYVKKLHEQVKAQIEKKNASYARQANKSRKKV 532
Query: 540 VFEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNV 719
V EPGDWVWVH++KERFP R+SKL PRGDGPFQVLE+INDNAYK+DLP EYNVS TFNV
Sbjct: 533 VLEPGDWVWVHLKKERFPEHRKSKLQPRGDGPFQVLEKINDNAYKIDLPNEYNVSATFNV 592
Query: 720 TDLSPFD 740
+DLS FD
Sbjct: 593 SDLSLFD 599
>emb|CAN77247.1| hypothetical protein VITISV_021658 [Vitis vinifera]
Length = 1323
Score = 360 bits (925), Expect = 1e-96
Identities = 184/329 (55%), Positives = 225/329 (68%), Gaps = 1/329 (0%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFI CHK DDA H+ +LFF+E+VRLH +PR+I+SDRD
Sbjct: 1047 HFISCHKTDDATHIANLFFREIVRLHXVPRSIVSDRD----------------------- 1083
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
KN+K+WE+CLP +EFAYNRS+HS T FSPF IVY
Sbjct: 1084 --------------------------KNLKNWEDCLPFIEFAYNRSIHSTTNFSPFXIVY 1117
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNPLT LDL PLP ++ T+LDG+KK + VK++HE + +IE++ EQYA +ANKGRR+V+
Sbjct: 1118 GFNPLTLLDLLPLPFNEMTSLDGEKKAZMVKKLHESVQKHIEKKNEQYATKANKGRRQVL 1177
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGDWVWVHMRKERFP +RRSKL PRGDGPFQVLERINDNAYKLDLP EYN+S TFNV
Sbjct: 1178 FEPGDWVWVHMRKERFPTRRRSKLHPRGDGPFQVLERINDNAYKLDLPXEYNISATFNVX 1237
Query: 723 DLSPFDVGDDLDLRTNPLQEEGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHGLIQE 902
DLSPFDVGD D RTNP +E GND Q +DP+ V GP+T+AR+KK KEAL+GLIQE
Sbjct: 1238 DLSPFDVGD--DSRTNPFEESGNDENQ-QAFKDPLHVXXGPITKARSKKIKEALNGLIQE 1294
Query: 903 VWAQALMKKPIGEGGP-DNTRVINLIECV 986
+W + GP ++ VINLI+ +
Sbjct: 1295 IWDD--XNTGHSKFGPKEDEGVINLIQAI 1321
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 353 bits (907), Expect = 1e-94
Identities = 167/302 (55%), Positives = 224/302 (74%), Gaps = 4/302 (1%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ DLFF+E+VRLHG+P TI+SDRD+KFLS+F FST
Sbjct: 1300 HFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFST 1359
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLST+LRA++KKNIK WE+CLPH+EFAYNRS+HS T+ PF+IVY
Sbjct: 1360 TCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVY 1419
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
G P P+DL PLP + N D ++ + + ++HE + NIER +Y ++KGR+++
Sbjct: 1420 GLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKGRKEIN 1479
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VW+H+RKERFP R+SKLLPR DGPF+VLE+INDNAY+LDLP ++ VS TFN+
Sbjct: 1480 FEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGVSPTFNIA 1539
Query: 723 DLSPFDVGDDLDL--RTNPLQE-EGNDGVQGSLIQDPVRVP-SGPVTRARAKKFKEALHG 890
DL P+ +G++++L RT +QE E ++ + + P++VP SGP+TRARA++ +
Sbjct: 1540 DLKPY-LGEEVELESRTTQMQEGENDEDIHTTDASIPIQVPISGPITRARARQLNHQVIT 1598
Query: 891 LI 896
L+
Sbjct: 1599 LL 1600
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 350 bits (899), Expect = 1e-93
Identities = 163/255 (63%), Positives = 199/255 (78%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPC+K DDA HV DLFF+EVVRLHG+PRTI+SDRD KF+SYF FST
Sbjct: 899 HFIPCNKSDDASHVADLFFREVVRLHGVPRTIVSDRDVKFMSYFWKTLWAKLGTKLLFST 958
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CH DGQ EVVNRTLS LLR +IKKN+K WE+CLPHVEFAYNR VHS TQ SPFE+VY
Sbjct: 959 TCHSQIDGQMEVVNRTLSMLLRMMIKKNLKEWEDCLPHVEFAYNRVVHSTTQLSPFEVVY 1018
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNP+TPLDL PLP + N++ K+ D+VK++HEK + IER + YA +ANK R+K++
Sbjct: 1019 GFNPITPLDLLPLPLQERANMEATKRADYVKKMHEKTKETIERIIQSYAAKANKDRKKML 1078
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
F+PG+ VWVH+RK+RFP +R+SKL+P GDGPF+VLE+I DNAYK+DLPG+Y VS TFNV
Sbjct: 1079 FQPGELVWVHLRKDRFPEKRKSKLMPHGDGPFRVLEKITDNAYKIDLPGDYTVSNTFNVV 1138
Query: 723 DLSPFDVGDDLDLRT 767
DLSPF ++ D RT
Sbjct: 1139 DLSPFFGTEETDSRT 1153
>emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 347 bits (890), Expect = 1e-92
Identities = 172/305 (56%), Positives = 214/305 (70%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
H I CHK DDA H+ +LFF+++V+LHG+PR+I+ D
Sbjct: 70 HSISCHKIDDATHIANLFFRKIVQLHGVPRSIVFDH------------------------ 105
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
GQTEVVNRTLS LLR II+KN+K+WE+CLP +EFAYNRSVHS T FSPF+IVY
Sbjct: 106 -------GQTEVVNRTLSILLRTIIQKNLKNWEDCLPFIEFAYNRSVHSTTNFSPFKIVY 158
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GFNPLTPLDL PLP ++ T+LDG+KK + VK++HE R +IE++ EQYA +ANKGRR+V+
Sbjct: 159 GFNPLTPLDLLPLPVNEMTSLDGEKKAEMVKKLHESVRKHIEKKNEQYATKANKGRRQVL 218
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGDWVWVH+RK RFP ++SKL PRGDGPFQVLERINDNAYKLDLPG+
Sbjct: 219 FEPGDWVWVHIRKGRFPTCKQSKLHPRGDGPFQVLERINDNAYKLDLPGD---------- 268
Query: 723 DLSPFDVGDDLDLRTNPLQEEGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHGLIQE 902
D RTNP +E GND Q +DP+ VP GP+T+AR+KK KEAL+GLIQ+
Sbjct: 269 -----------DSRTNPFEERGNDENQ-QAFKDPLHVPVGPITKARSKKIKEALNGLIQD 316
Query: 903 VWAQA 917
+WA +
Sbjct: 317 IWADS 321
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 343 bits (881), Expect = 1e-91
Identities = 165/293 (56%), Positives = 211/293 (72%), Gaps = 4/293 (1%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA H+ DLFF+E+VRLHG+P TI+SDRD+KFLS+F FST
Sbjct: 1297 HFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFST 1356
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLST+LRA++KKNIK WEECLPH+EFAYNRS+HS T+ PF+IVY
Sbjct: 1357 TCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVY 1416
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
G P P+DL PLP + N D +++ + + ++HE + NIER +Y +KGRR++
Sbjct: 1417 GLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELT 1476
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VW+H+RKERFP R+SKL+PR DGPF+VL +IN+NAYK+DLP ++ VS TFNV
Sbjct: 1477 FEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVA 1536
Query: 723 DLSPF-DVGDDLDLRTNPLQEEGNDGVQGSLIQ---DPVRVPSGPVTRARAKK 869
DL P+ D+L+ RT +Q EG D + I P GP+TRARA++
Sbjct: 1537 DLKPYLGEEDELESRTTQMQ-EGEDDEDINTIDTSTSPHIQHDGPITRARARQ 1588
Score = 134 bits (338), Expect = 1e-28
Identities = 83/247 (33%), Positives = 129/247 (52%), Gaps = 6/247 (2%)
Frame = +3
Query: 6 FIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFSTI 185
FIP + +L+F +V LHG+P+ I+SDR+S+F S+F FST
Sbjct: 2120 FIPVKTTYGGNKLAELYFARIVSLHGVPKKIVSDRESQFTSHFWKKLQEELGTRLNFSTA 2179
Query: 186 CHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVYG 365
HP TDGQTE +N+ L +L A + K+W++ LP+ EF+YN S ++ Q +P+E +YG
Sbjct: 2180 YHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYG 2239
Query: 366 FNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARL---NIERRTEQYAKQANKGRRK 536
TPL + E Q TD +++ K R N++ + A+ RR
Sbjct: 2240 RKCRTPLLWDQVGESQVFG------TDILREAEAKVRTIWDNLKVAQSRQKSYADNRRRN 2293
Query: 537 VVFEPGDWVWVHMRKER--FPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEY-NVSV 707
+ F D+V++ + R Q + KL PR GPF+++ R + AY+L+LP NV
Sbjct: 2294 LEFAVDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEVAYQLELPASLGNVHD 2353
Query: 708 TFNVTDL 728
F+V+ L
Sbjct: 2354 VFHVSQL 2360
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 343 bits (880), Expect = 2e-91
Identities = 163/292 (55%), Positives = 211/292 (72%), Gaps = 3/292 (1%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA +V DLFF+E++RLHG+P TI+SDRD+KFLS+F FST
Sbjct: 1341 HFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFST 1400
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLST+LRA++K N K WEECLPH+EFAYNRS+HS T+ PFEIVY
Sbjct: 1401 TCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVY 1460
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
GF P P+DL PLP + N D +++++ + +IHE + NIER +Y +KGR+ VV
Sbjct: 1461 GFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHVV 1520
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
F PGD VW+H+RK+RFP R+SKL+PR DGPF+VLE+INDNAYKL+LP ++ VS TFN+
Sbjct: 1521 FAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIA 1580
Query: 723 DLSPF-DVGDDLDLRTNPLQEEGNDGVQGSLIQD--PVRVPSGPVTRARAKK 869
DL P+ D+L RT QE +D +++ P +GP+TRARA++
Sbjct: 1581 DLKPYLGEEDELPSRTTSFQEGEDDEDINTIVTPTAPTVTYTGPITRARARQ 1632
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 342 bits (877), Expect = 4e-91
Identities = 165/298 (55%), Positives = 211/298 (70%), Gaps = 2/298 (0%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA HV DLFF+E+VRLHG+P TI+SDRD+KFLS+F FST
Sbjct: 1325 HFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFST 1384
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRTLST+LRA++KKNIK WEECLPHVEFAYNRS HS T+ PFEIVY
Sbjct: 1385 TCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVY 1444
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
G P P+DL PLP + N D + + + ++HE + NIER +Y +KG++ V
Sbjct: 1445 GLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA 1504
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VW+H+RK+RFP R+SKLLPR DGPF+VL++INDN YKL+LP ++ VS TFN+
Sbjct: 1505 FEPGDLVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGVSPTFNIA 1564
Query: 723 DLSPF-DVGDDLDLRTNPLQE-EGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEALHG 890
DL P+ D+L+ RT +QE E ++ + + P+ GP+TRARA++ + G
Sbjct: 1565 DLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTTTPI-AQQGPMTRARARELNYQVQG 1621
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 340 bits (873), Expect = 1e-90
Identities = 165/296 (55%), Positives = 211/296 (71%), Gaps = 2/296 (0%)
Frame = +3
Query: 3 HFIPCHKYDDAFHVVDLFFKEVVRLHGMPRTIISDRDSKFLSYFXXXXXXXXXXXXXFST 182
HFIPCHK DDA HV DLFF+E+VRLHG+P TI+SDRD+KFLS+F FST
Sbjct: 1221 HFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFST 1280
Query: 183 ICHP*TDGQTEVVNRTLSTLLRAIIKKNIKSWEECLPHVEFAYNRSVHSATQFSPFEIVY 362
CHP TDGQTEVVNRT+ST+LRA++KKNIK WEECLPHVEFAYNRS HS T+ PFEIVY
Sbjct: 1281 TCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVY 1340
Query: 363 GFNPLTPLDLSPLPEHQHTNLDGQKKTDFVKQIHEKARLNIERRTEQYAKQANKGRRKVV 542
G P P+DL PLP + N D + + + + ++HE + NIER +Y +KG++ V
Sbjct: 1341 GLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVA 1400
Query: 543 FEPGDWVWVHMRKERFPLQRRSKLLPRGDGPFQVLERINDNAYKLDLPGEYNVSVTFNVT 722
FEPGD VW+H+RK+RFP R+SKL PR DGPFQVL++INDNAYKL+LP ++ VS TFN+
Sbjct: 1401 FEPGDLVWLHLRKDRFPNLRKSKLPPRADGPFQVLQKINDNAYKLELPADFGVSPTFNIA 1460
Query: 723 DLSPF-DVGDDLDLRTNPLQE-EGNDGVQGSLIQDPVRVPSGPVTRARAKKFKEAL 884
DL P+ D+L+ RT +QE E ++ + + P+ GP+TRARA++ L
Sbjct: 1461 DLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTTTPI-AQQGPMTRARARELNYQL 1515