BLASTX nr result

ID: Mentha26_contig00016638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00016638
         (340 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Popu...    63   5e-08
ref|XP_007025241.1| Pentatricopeptide repeat superfamily protein...    63   5e-08
ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
gb|EYU33203.1| hypothetical protein MIMGU_mgv1a020021mg, partial...    61   1e-07
ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07

>ref|XP_006377256.1| hypothetical protein POPTR_0011s03060g [Populus trichocarpa]
           gi|550327464|gb|ERP55053.1| hypothetical protein
           POPTR_0011s03060g [Populus trichocarpa]
          Length = 262

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/67 (49%), Positives = 43/67 (64%)
 Frame = +1

Query: 139 SGGEKFIQLSKAIASPQHCRGSQKEQPLVAPTAVEKKLVRKSGKKEHHLWQRRDQAGSGH 318
           S G K I +   + S    + S+K+  L +     +K+V+KSGKKEHHLWQ+RD AGSG 
Sbjct: 131 SEGRKRIVMLLNVTSALCVKCSKKQLKLNSRADENRKVVKKSGKKEHHLWQKRDSAGSGQ 190

Query: 319 KAQNLVR 339
           KA NLVR
Sbjct: 191 KALNLVR 197


>ref|XP_007025241.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508780607|gb|EOY27863.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 276

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/90 (43%), Positives = 45/90 (50%)
 Frame = +1

Query: 70  SQKYYVSPLLINASNSSEVTHKSSGGEKFIQLSKAIASPQHCRGSQKEQPLVAPTAVEKK 249
           S  Y  SP   N    +EV      G    ++S        C     EQ L    AVEKK
Sbjct: 8   SISYPFSPWAENKVRRNEVAFLLDSGFSICRISYV-----KCSQKLGEQSLGISEAVEKK 62

Query: 250 LVRKSGKKEHHLWQRRDQAGSGHKAQNLVR 339
            V+K GK EHHLW++RD AGSG KA NLVR
Sbjct: 63  PVKKVGKNEHHLWKKRDSAGSGQKALNLVR 92


>ref|XP_004294568.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 300

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 25/49 (51%), Positives = 37/49 (75%)
 Frame = +1

Query: 193 CRGSQKEQPLVAPTAVEKKLVRKSGKKEHHLWQRRDQAGSGHKAQNLVR 339
           C   Q  Q ++A  A+EKK+++K+G+ EHHLW+++D AGSG KA NL+R
Sbjct: 63  CCQKQSRQTVMASKAMEKKIIKKAGRNEHHLWKKKDSAGSGQKALNLIR 111


>gb|EYU33203.1| hypothetical protein MIMGU_mgv1a020021mg, partial [Mimulus
           guttatus]
          Length = 209

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/31 (83%), Positives = 29/31 (93%)
 Frame = +1

Query: 247 KLVRKSGKKEHHLWQRRDQAGSGHKAQNLVR 339
           K++RKSGKKEHHLWQ+RD AGSGHKA NLVR
Sbjct: 1   KVIRKSGKKEHHLWQKRDSAGSGHKALNLVR 31


>ref|XP_004164255.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like [Cucumis sativus]
          Length = 270

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +1

Query: 193 CRGSQKEQPLVAPTAVEKKLVRKSGKKEHHLWQRRDQAGSGHKAQNLVR 339
           C  +Q  QPL + T  E+++V+K GK+ HHLW++RD AGSG KA NLVR
Sbjct: 36  CVHNQAAQPLTSFTTPERRVVKKVGKETHHLWKKRDSAGSGQKALNLVR 84


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