BLASTX nr result

ID: Mentha26_contig00016620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00016620
         (473 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37299.1| hypothetical protein MIMGU_mgv1a021058mg, partial...    64   3e-08
ref|XP_004306405.1| PREDICTED: F-box protein At5g07610-like [Fra...    62   6e-08
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    58   1e-06

>gb|EYU37299.1| hypothetical protein MIMGU_mgv1a021058mg, partial [Mimulus
           guttatus]
          Length = 364

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
 Frame = +3

Query: 45  SVAGIYLIFDPSTSPYYTVVCFEKTKTF----TRVHSYDSETRKWKLGGERIARNTIFHD 212
           +++G+ L+FDPS SP+Y +VC    K +      +  YDS++  W            F  
Sbjct: 149 AISGVCLVFDPSRSPHYKIVCVRSGKNWEYSNPTIDIYDSQSGTWNYRLHFTPIKIKFSS 208

Query: 213 GISLNGVIFFLRCSSSSSYRFTPDDGLTK-IPALPRLRFRIRRTSHTVSFGTKRNFAMES 389
           GI  N  I+++R +S S Y     +   K I  LPR++   RR        T +N+ MES
Sbjct: 209 GIYRNDCIYWIRPTSRSYYYNLQTEVEDKMINNLPRIKTPWRRNGE-----TNKNYVMES 263

Query: 390 NG---VVLLFLWHETNVLVVYEMKKGMECGW 473
           NG   ++  ++  E   + VYE+ +    GW
Sbjct: 264 NGHAHILCTYMGPEFKSMFVYELSED-NSGW 293


>ref|XP_004306405.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
           vesca]
          Length = 385

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
 Frame = +3

Query: 30  PLPSTSVAGIYLIFDPSTSPYYTVVCFE---KTKTFTRVHSYDSETRKWKLGGERIARN- 197
           P   T + G +++FDPS SPYY V+CF    K+K   ++  Y S+TR W+L      +  
Sbjct: 153 PPEVTYIIGCHMVFDPSKSPYYKVLCFHTTPKSKEVFQIQIYSSQTRSWRLLNSSFGKEL 212

Query: 198 TIFHDGISLNGVIFFLRCSSSSSYRFTPDDGLTKIPALPRL 320
           + +HDG+  NG I ++   +  +Y    ++    +   P+L
Sbjct: 213 SSYHDGVYCNGAIHWINKVADMTYYHIDEERFGFVEGPPQL 253


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
 Frame = +3

Query: 45  SVAGIYLIFDPSTSPYYTVVCF---EKTKTFTRVHSYDSETRKWKLGGE--RIARNTIFH 209
           +V GI L FDPS SPYY+V+C    E + +  ++  Y S T  W+L G+  R   + +F+
Sbjct: 169 TVFGINLAFDPSKSPYYSVICVRSCEVSISHYQIEIYSSGTGDWRLSGKPFRAPFDMVFY 228

Query: 210 DGISLNGVIFFLRCSSSSSYRFTPDDGLTKIPALP 314
           DG+  NG + ++  S +S Y F  D+G  +I  +P
Sbjct: 229 DGVFWNGAVHWISPSGASLY-FGIDEG--RIDTMP 260


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