BLASTX nr result

ID: Mentha26_contig00016543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00016543
         (312 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45591.1| hypothetical protein MIMGU_mgv1a014399mg [Mimulus...    70   4e-10
ref|XP_004229191.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   1e-08
ref|XP_006356968.1| PREDICTED: U1 small nuclear ribonucleoprotei...    64   2e-08

>gb|EYU45591.1| hypothetical protein MIMGU_mgv1a014399mg [Mimulus guttatus]
           gi|604347340|gb|EYU45592.1| hypothetical protein
           MIMGU_mgv1a014399mg [Mimulus guttatus]
          Length = 191

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 39/76 (51%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -3

Query: 310 GQTVGYQQIGAAYNQHLAAFPGARPRL----PHMFSIPGSVPPQXXXXXXXXXXXXXXXX 143
           GQ   YQQIGAAYNQHLAAFPGARPRL    PHM   PG++ P                 
Sbjct: 59  GQAAAYQQIGAAYNQHLAAFPGARPRLPVMPPHMLPYPGAMHPH---FPPGIRPPVLPLP 115

Query: 142 XPGYGKPPMMPMQPPH 95
            PGY   PM+PMQ P+
Sbjct: 116 IPGYATGPMVPMQTPN 131


>ref|XP_004229191.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Solanum
           lycopersicum]
          Length = 199

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/72 (51%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
 Frame = -3

Query: 310 GQTVGYQQIGAAYNQHLAAFPGARPRL----PHMFSIPGSVPPQXXXXXXXXXXXXXXXX 143
           GQ V YQQIGAAYNQHLAAFPG RPRL    P M  +PG +PPQ                
Sbjct: 59  GQAVAYQQIGAAYNQHLAAFPGQRPRLPMMPPPMLPVPGVMPPQLMAGARPPILPVPVLG 118

Query: 142 XPGYGK-PPMMP 110
            PGY   PP  P
Sbjct: 119 APGYSAVPPTAP 130


>ref|XP_006356968.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Solanum
           tuberosum]
          Length = 154

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/44 (70%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
 Frame = -3

Query: 310 GQTVGYQQIGAAYNQHLAAFPGARPRL----PHMFSIPGSVPPQ 191
           GQ V YQQIGAAYNQHLAAFPG RPRL    P M  +PG +PPQ
Sbjct: 59  GQAVAYQQIGAAYNQHLAAFPGQRPRLPMMPPPMLPVPGVMPPQ 102


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