BLASTX nr result

ID: Mentha26_contig00016254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00016254
         (588 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU35543.1| hypothetical protein MIMGU_mgv1a0027631mg, partia...    74   3e-11
ref|XP_004236893.1| PREDICTED: zinc finger CCCH domain-containin...    70   6e-10
ref|XP_006355013.1| PREDICTED: zinc finger CCCH domain-containin...    67   3e-09
ref|XP_003580797.1| PREDICTED: zinc finger CCCH domain-containin...    59   1e-06

>gb|EYU35543.1| hypothetical protein MIMGU_mgv1a0027631mg, partial [Mimulus
           guttatus]
          Length = 601

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 52/140 (37%), Positives = 69/140 (49%)
 Frame = -3

Query: 586 GPKPLEEILKRKKRETSGNNSSRAEGVVEEKNQKGEEETHESLTRSENIKEVDKSVSVET 407
           GPKPL+EILKRK+ E SG   +  EG++               T  +N++E    +  E 
Sbjct: 489 GPKPLQEILKRKRGERSG--IAEEEGII---------------TDDKNVEEAADKIDKE- 530

Query: 406 MEAGENKPEAEDGIAGDDAVDPETEPYEQRDGESDYEQLGAEDYTMYXXXXXXXXXXXXX 227
               E+ P AE+GI  +D V+ E E YE R+GESDYE +  EDY +Y             
Sbjct: 531 ----ESSP-AEEGILVEDGVNLEAEVYEPREGESDYEHVDGEDYELY----DGENGEDEG 581

Query: 226 XXXXXXXXXXDFAKKMGVMY 167
                     +FAKKMGVMY
Sbjct: 582 EYPDEEDDGDEFAKKMGVMY 601


>ref|XP_004236893.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Solanum lycopersicum]
          Length = 714

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
 Frame = -3

Query: 586  GPKPLEEILKRKKRETSGNNSSRAEGVVEEKNQKGEEETHESLTRSE-NIKEVDKSVSVE 410
            GP PL+EILKRK+   +G  S ++E    E+N         S++R+  + ++ ++S    
Sbjct: 567  GPMPLQEILKRKRNSKTGMTSDKSEDHQHERNDHALPVVTSSISRNNTDFEQKEESDPPS 626

Query: 409  TMEAGENKP--------EAEDGIAGDDA--VDPETEPYEQRDGESDYEQLGAEDYTMYXX 260
             + A    P        EAE+G+  ++A   DPE E ++QRDG+ DYEQ+  EDY +   
Sbjct: 627  GVLADHKSPAHHVANELEAEEGMIMEEADDQDPEAEGHDQRDGDYDYEQVDGEDYNL--- 683

Query: 259  XXXXXXXXXXXXXXXXXXXXXDFAKKMGVMYS 164
                                 +FAKKMGV++S
Sbjct: 684  -DEGENIDAGEEYLDEDDDEDEFAKKMGVVFS 714


>ref|XP_006355013.1| PREDICTED: zinc finger CCCH domain-containing protein 17-like
            [Solanum tuberosum]
          Length = 708

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
 Frame = -3

Query: 586  GPKPLEEILKRKKRETSGNNSSRAEGVVEEKNQKGEEETHESLTRSENI----KEVDKSV 419
            GP PL+EILKRK+   +G  S ++E    ++          S++R+       +E D   
Sbjct: 562  GPMPLQEILKRKRSSKTGMPSDKSEDYQHKRKDHSVPVVTSSISRNNTDFGQKEESDPPS 621

Query: 418  SVET-----MEAGENKPEAEDGIAGDDA--VDPETEPYEQRDGESDYEQLGAEDYTMYXX 260
             V          G N+ EAE+G+  ++A   DPE E ++QRDG+ DYEQ+  EDY +   
Sbjct: 622  GVSADHQSPAHHGANELEAEEGMIVEEADDQDPEAEGHDQRDGDYDYEQVDGEDYNL--- 678

Query: 259  XXXXXXXXXXXXXXXXXXXXXDFAKKMGVMYS 164
                                 DFAKKMGV++S
Sbjct: 679  --DEGENIDAGEEYLDDDDEDDFAKKMGVVFS 708


>ref|XP_003580797.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Brachypodium distachyon]
          Length = 703

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
 Frame = -3

Query: 586 GPKPLEEILKRKKRETSGNNSSRAEGVVEEKNQ----------KGEEETHESLTRSENIK 437
           GPKPL  IL++K++ T GN SS   G  ++  +          + E+E ++++  SE  K
Sbjct: 550 GPKPLSIILQKKRQATCGNGSSAHNGKQDKSAKVSHRQPESIVETEKEGYDNIVSSEEYK 609

Query: 436 -----EVDKSVSVETMEAGEN-----KPEAEDGIAGDDAVDPETEPYEQRDGESDYEQLG 287
                E  +   +     G++     KPE ED I  D  V+ E + YEQ +GESDY+   
Sbjct: 610 SRSGDEYKEESRIPAEGHGQSSSHGDKPETEDIIEVDPVVNQEADNYEQGEGESDYDAAE 669

Query: 286 AEDY 275
            ++Y
Sbjct: 670 GQEY 673


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